Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0321000-01
CDS Infomation	cds chromosome:IRGSP-1.0:2:12809571:12817274:-1 gene:Os02g0321000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os02t0321000-01)
Sequence	ATGCGCGGGCGCATGGCCTCCTCGGCCTCCGCCGCGGCTCTCCTGCCCCTCCCCTCTCCT TCCTGCTCCTCCTCGGAGGACTCCGACGACGGAAAGCACCTCCCGTCTCCTCCCGCACCG GAGGCGAACACCCCGCCTACGCAGCAGCAGAAGCGGCGGCGGCTGGAGCGAGACTACAAC GTGGCCATGAAAGCCCTGGCGCTCGCCGGCGACTTGGACGAGGTGGTCGCTGTCTTTGCT GAGCTAAAGCGGACTGCCGCCGACGGTGGTGATGGCGGCGCGCCGCCCAACGTGCTGTGC TATAACACGCTCGTCAATGCGCTCGCGGAGGCCGGTCGCGAGGGGGAGGCCCTCAAGGCG TTCGATGAAATGCTCGCGTCGGGTGTAGCGCCCAACGCGTCGTCACAAAACATCCTGATC AAGATGCACGCAAGGCGGTCGGAGTTTGACCTTGCTTGGGAGCTTATCCACAAGAGCGGG GTGGAGCCTGACGTTGGTACGTACTCAACGCTCATCGCGGGCCTGTGCCGGGCAGGTAAG ATCGTTGAGGCGTGGGGCGTGCTTGACTGGATGCTGGAGAAGAACTGCCGCCCGATGGTG CAGACTTACACGCCCATAGTACAAGCATATTGCCGCGATGGCCGCATCGTGGAGGCCAAG CTGCTGATGGCCGAGATGGAACGTCTTGGCTGCCTTCCCAACGTCGTCACATACAATGTT CTAATCAGGGCCTTGTGTGATGATGACAAATTTGATGAAGTTGAACAGGTTTTAATGGAA AGTAGTACCAAAGATTGGAAGCCCAGTACGGTCACGTACAATATATATATGAATGGCCTC TGCAAGAAAGGTAAGGCTAAGGAAGCACTTGAGCTGTTGGATGTTATGTTAGGTGAGGGA TTGGAACCCACAGCTTATACTTGGAGTATTCTTCTGAATTGCCTTTGCCATTCCTCAAGA CTTTTGGATGCTATATACTTGTTAGAGAGGAGCACAGAGTTGAAATGGTATGCTGGTGTT GTTGCATACAACACTGTAATGAGCAGTTTGTGTGAGATGGGCAAATGGAGGGGTATTATG AAGCTATTAACAGATATGATCAAAAAAGGTATCGAGCCAAACACAAGGACGTTCAACATT TTGATTCGTAGTCTTTGTGTTGGGGGAAAGTCCTCCTTAGCCAAGAGCTTGATCCATAGT CTAGGATTTGCTGCAAATGTGGTGACATACAATATACTCCTTCATTGGTTTTACTACCAT GGAAAGTTAACTGAAGCGAATCGCTTAATTTCAGTAATGGAGGAAAAGAATATTGCTCCA GATGAAGTCACCTATACTATAATAATTGATGGATTATGCAGAGAAAGGAAATTTGATGCA GCTACTGCTTGTTTTCTTAAATCACTTACAAGTGGGCTATCGATGGATGTTCTTACTGTC CTTCTCAACAGGCTTGTTTATGCTGATAAAATATGGGAAATCAATCGCATATTTGATGGA AAAGATTTTGTCCCTGATCATCATGTTTTTGACCTTACAATTAGAACATTCTGTAGGGTT GGCTATTGTCACTATAGAACTTTTTATAAGCTAAACCTTATTCTGGATGCGATGTTGAAA AGGAAGTAA

Peptide Sequence

PEP ID	Os02t0321000-01
PEP Infomation	pep chromosome:IRGSP-1.0:2:12809571:12817274:-1 gene:Os02g0321000 transcript:Os02t0321000-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os02t0321000-01)
Sequence	MRGRMASSASAAALLPLPSPSCSSSEDSDDGKHLPSPPAPEANTPPTQQQKRRRLERDYN VAMKALALAGDLDEVVAVFAELKRTAADGGDGGAPPNVLCYNTLVNALAEAGREGEALKA FDEMLASGVAPNASSQNILIKMHARRSEFDLAWELIHKSGVEPDVGTYSTLIAGLCRAGK IVEAWGVLDWMLEKNCRPMVQTYTPIVQAYCRDGRIVEAKLLMAEMERLGCLPNVVTYNV LIRALCDDDKFDEVEQVLMESSTKDWKPSTVTYNIYMNGLCKKGKAKEALELLDVMLGEG LEPTAYTWSILLNCLCHSSRLLDAIYLLERSTELKWYAGVVAYNTVMSSLCEMGKWRGIM KLLTDMIKKGIEPNTRTFNILIRSLCVGGKSSLAKSLIHSLGFAANVVTYNILLHWFYYH GKLTEANRLISVMEEKNIAPDEVTYTIIIDGLCRERKFDAATACFLKSLTSGLSMDVLTV LLNRLVYADKIWEINRIFDGKDFVPDHHVFDLTIRTFCRVGYCHYRTFYKLNLILDAMLK RK

Transcript Sequence

Transcript ID	Os02t0321000-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:12809571:12817274:-1 gene:Os02g0321000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os02t0321000-01)
Sequence	GTTTCTGCCTCACTTTGAATCGCGAACCACTACGGCCGCCGCCGCCGCCGCCGCCACCGC CACCACGGCCTCCGCCCCCCCCATTCGGTGACCATCGGGCGCATAGCTGTCCTCCTCACC TCTCGCCTCCTGATGCGCGGGCGCATGGCCTCCTCGGCCTCCGCCGCGGCTCTCCTGCCC CTCCCCTCTCCTTCCTGCTCCTCCTCGGAGGACTCCGACGACGGAAAGCACCTCCCGTCT CCTCCCGCACCGGAGGCGAACACCCCGCCTACGCAGCAGCAGAAGCGGCGGCGGCTGGAG CGAGACTACAACGTGGCCATGAAAGCCCTGGCGCTCGCCGGCGACTTGGACGAGGTGGTC GCTGTCTTTGCTGAGCTAAAGCGGACTGCCGCCGACGGTGGTGATGGCGGCGCGCCGCCC AACGTGCTGTGCTATAACACGCTCGTCAATGCGCTCGCGGAGGCCGGTCGCGAGGGGGAG GCCCTCAAGGCGTTCGATGAAATGCTCGCGTCGGGTGTAGCGCCCAACGCGTCGTCACAA AACATCCTGATCAAGATGCACGCAAGGCGGTCGGAGTTTGACCTTGCTTGGGAGCTTATC CACAAGAGCGGGGTGGAGCCTGACGTTGGTACGTACTCAACGCTCATCGCGGGCCTGTGC CGGGCAGGTAAGATCGTTGAGGCGTGGGGCGTGCTTGACTGGATGCTGGAGAAGAACTGC CGCCCGATGGTGCAGACTTACACGCCCATAGTACAAGCATATTGCCGCGATGGCCGCATC GTGGAGGCCAAGCTGCTGATGGCCGAGATGGAACGTCTTGGCTGCCTTCCCAACGTCGTC ACATACAATGTTCTAATCAGGGCCTTGTGTGATGATGACAAATTTGATGAAGTTGAACAG GTTTTAATGGAAAGTAGTACCAAAGATTGGAAGCCCAGTACGGTCACGTACAATATATAT ATGAATGGCCTCTGCAAGAAAGGTAAGGCTAAGGAAGCACTTGAGCTGTTGGATGTTATG TTAGGTGAGGGATTGGAACCCACAGCTTATACTTGGAGTATTCTTCTGAATTGCCTTTGC CATTCCTCAAGACTTTTGGATGCTATATACTTGTTAGAGAGGAGCACAGAGTTGAAATGG TATGCTGGTGTTGTTGCATACAACACTGTAATGAGCAGTTTGTGTGAGATGGGCAAATGG AGGGGTATTATGAAGCTATTAACAGATATGATCAAAAAAGGTATCGAGCCAAACACAAGG ACGTTCAACATTTTGATTCGTAGTCTTTGTGTTGGGGGAAAGTCCTCCTTAGCCAAGAGC TTGATCCATAGTCTAGGATTTGCTGCAAATGTGGTGACATACAATATACTCCTTCATTGG TTTTACTACCATGGAAAGTTAACTGAAGCGAATCGCTTAATTTCAGTAATGGAGGAAAAG AATATTGCTCCAGATGAAGTCACCTATACTATAATAATTGATGGATTATGCAGAGAAAGG AAATTTGATGCAGCTACTGCTTGTTTTCTTAAATCACTTACAAGTGGGCTATCGATGGAT GTTCTTACTGTCCTTCTCAACAGGCTTGTTTATGCTGATAAAATATGGGAAATCAATCGC ATATTTGATGGAAAAGATTTTGTCCCTGATCATCATGTTTTTGACCTTACAATTAGAACA TTCTGTAGGGTTGGCTATTGTCACTATAGAACTTTTTATAAGCTAAACCTTATTCTGGAT GCGATGTTGAAAAGGAAGTAAACTGAAGCCTTGTGGATCTAGGAAACATATCGGTTACTG TAGGCAAGATGAGAACAGGCGGGAAGCATTTGACTGGCTTTATCATTTAAGCTGCTTAAA AATGGATCTGTGGTGCAAAAAGCCAAGACCAAGCACATACTATTGGTAAATTGGAACTAT TGATTTGTTCTGGGTAGAAGAGAAGTGAATTGAAATCCATTAAAGTAAATGTGGAAGTCC TGCGAAGAAAGGAGTTTGTTAAGAGGCCATAAGGCAGGTGTGGGCTATGGGTTTGTCATT GGTGTTGCCCTTCTGCTTTTATGCTGTATATCATTTTACGTTGGAGTTCACTTTGTGCAC ATTACACAATGGAATATCAGACTGTGAGTTCCCTTGCTTGGGATTTCAACAGAGTGCAAG ATGCATTACTGCCCTCCTTTAGGATTTTCATTTGGAAATCAATGATTGCTGCAAGGTCTG AGGTAGGAAGGCACTAAGGACACATGGAGGGAATTTATAACAGCAGCAGACACCAAGCCA TTGAAAACCATCCCAAATTTGGGGCCAGAGTTGAAATGTGCATATTTTAATGAGCTGAGG GACCAAAATGAACGATTTTACAATTGAGGACCATGCCCTCAGCAACACACAGGCGCATAT GAGTGGCAGTGGTGTGGAGATGCCTATTCCGCTGGTGAAGAGGAATAGGATGAGGAGGAA CAGGTCTAGGAAGAGGAGCAGGATGAAGGTTGCAAGGAGGACAGGAGCAAATGAAGGAAT CCAGCGATGGATAGGAAGAAGCAGAGGGCTCACTGCTGCATCTCCTCCTGTTCATCGCCA CTGTCACTGCTGCCTCCTCCCAACCGCCACAGCCAAAGCCTTCTATCTCTCCCCATCTCC ACCCCTCTTACCCTTCGGTGCTTCCCATTCCTTTGCCAAAGTCTGCACCATTGAGGCCAA GGCCAGGAACAAGCCAGCAACACACTCACCCCTCCCTAAGCCCTACAGTCCTACACTACC TCCATGTTCGCTCCCTCAGAAGCACCGTTTTAATGTAGTCCACACCCAGCCTACATGGAC AGGAGCAACTGATGTGGTATTCTTTGCCCTCTAGTGATGCAGGATCAAGGTGAATTTAAG CGAAGGTGCATATAAGCACAACCTGTAACAGTGTTCTGCTGCTATTTCATGGTTATGTAA CCACGCAATAGTTCTTTAGTTATGTAACCAAGAAATTGTGAAACACATGAATGAGCTTTC AATAGCTCAATTCTGAGGGTGTCAGTGGTGCTGCAAACAGTAACAAATGAAGGCATACTT TGGAGCTTAGCCGGAGCTTCACAGAGCTAGGTCTATGGCCCTTGCGGCTCAAGTGGTCTT GTTTTTCTGTTTTTAAGTGTTTAGGGTGGGGAGTTTCTGGATTCTCCTCCTATGTGTATC TTCTTCTTAGTAATGAAATGATGTGCATATCTTTAGTTTGTTCGGAAAGAAAAAATAGTT CTTTGCCCCAAAAGCAAAAAAAAAAAGTAGTTCCTATTTGACGAGAGACATTCTCTGGCT GCCAATAAGAAAAGTTAGTATTCTGTCTGC