Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0320300-01
CDS Infomation	cds chromosome:IRGSP-1.0:2:12765282:12772010:1 gene:Os02g0320300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Chalcone isomerase 3. (Os02t0320300-01)
Sequence	ATGAGCGCGGTGCCCGTCGTGTCCTCCGCGCTGGCCGGACCAGCGGTCGCGGTCGCGGTC GCCAGGCCCGCTTCCGGGTCCGTCACTCGCCTCCGTGCGCCGGCGCCCCACGGCGTGCCG GCCGGCTCCGTGCCCCTCGCGTCCGGACTTGCCAACTGCTACCGCCGCTCCGCCGCCGCC GCCCGGAGGCTTCCGATCCCGTCTGCAGCGGGGGGCGGCACAGTTGGGGATGCTTTTGTT ATAGAAGACACAACAAATGTGAAATTTCCTCGAGAGATAGCTGTTCCGGGCTACACCGAG CCTTTGGTTATTCTTGGAACAGGTTACAGAGAGAAGTTCTTTCTAAAAATATATGCTGCT GCATTCTATGTTGATTGCTCAATCGGCGTTGACACTATGCGATGGAGAGAAAAGGTTGGT ATTGAGACCTTTGATGCTTCCTCAGTTTTTGACTCCATTTTTAAAGCACCGGTTGTGAAA TCATTGAGTATAATTCTCGTTAGAGATGTTGATGGCAAGACGTTTGTGAAGGCTCTAGAT GACATTATTGCTCGTCAAATAAAAAAACCAAGTGCTGAGGAAGAACAGAGCCTGTCAACT TTCCAGAAAACCTTTCTAGGGCGTAGTCTGAAACAAGGAACAACTGTCTATCTAACTTGG CTTGAACCCTCGAAACTTCTGATCTCAATTGCAGGAAACCAAGATCCATGTCAAGTTGAT GCTGAAATCACATCAGCCACTGTTAATTATGCGCTATACGATGGCTTCTTGGGTAGTTCT CCAGTATCCCCTACTCTGAGATCTTCTACTGCACTACTGCTGGAGGCTATTCTTACAAAG TGA

Peptide Sequence

PEP ID	Os02t0320300-01
PEP Infomation	pep chromosome:IRGSP-1.0:2:12765282:12772010:1 gene:Os02g0320300 transcript:Os02t0320300-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Chalcone isomerase 3. (Os02t0320300-01)
Sequence	MSAVPVVSSALAGPAVAVAVARPASGSVTRLRAPAPHGVPAGSVPLASGLANCYRRSAAA ARRLPIPSAAGGGTVGDAFVIEDTTNVKFPREIAVPGYTEPLVILGTGYREKFFLKIYAA AFYVDCSIGVDTMRWREKVGIETFDASSVFDSIFKAPVVKSLSIILVRDVDGKTFVKALD DIIARQIKKPSAEEEQSLSTFQKTFLGRSLKQGTTVYLTWLEPSKLLISIAGNQDPCQVD AEITSATVNYALYDGFLGSSPVSPTLRSSTALLLEAILTK

Transcript Sequence

Transcript ID	Os02t0320300-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:12765282:12772010:1 gene:Os02g0320300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Chalcone isomerase 3. (Os02t0320300-01)
Sequence	TCCACTCCACTCGCTCTCCGTTCACCACTCCAAACGCGTAGCGCTAGCGCCGCCCGCCGC ACGATGAGCGCGGTGCCCGTCGTGTCCTCCGCGCTGGCCGGACCAGCGGTCGCGGTCGCG GTCGCCAGGCCCGCTTCCGGGTCCGTCACTCGCCTCCGTGCGCCGGCGCCCCACGGCGTG CCGGCCGGCTCCGTGCCCCTCGCGTCCGGACTTGCCAACTGCTACCGCCGCTCCGCCGCC GCCGCCCGGAGGCTTCCGATCCCGTCTGCAGCGGGGGGCGGCACAGTTGGGGATGCTTTT GTTATAGAAGACACAACAAATGTGAAATTTCCTCGAGAGATAGCTGTTCCGGGCTACACC GAGCCTTTGGTTATTCTTGGAACAGGTTACAGAGAGAAGTTCTTTCTAAAAATATATGCT GCTGCATTCTATGTTGATTGCTCAATCGGCGTTGACACTATGCGATGGAGAGAAAAGGTT GGTATTGAGACCTTTGATGCTTCCTCAGTTTTTGACTCCATTTTTAAAGCACCGGTTGTG AAATCATTGAGTATAATTCTCGTTAGAGATGTTGATGGCAAGACGTTTGTGAAGGCTCTA GATGACATTATTGCTCGTCAAATAAAAAAACCAAGTGCTGAGGAAGAACAGAGCCTGTCA ACTTTCCAGAAAACCTTTCTAGGGCGTAGTCTGAAACAAGGAACAACTGTCTATCTAACT TGGCTTGAACCCTCGAAACTTCTGATCTCAATTGCAGGAAACCAAGATCCATGTCAAGTT GATGCTGAAATCACATCAGCCACTGTTAATTATGCGCTATACGATGGCTTCTTGGGTAGT TCTCCAGTATCCCCTACTCTGAGATCTTCTACTGCACTACTGCTGGAGGCTATTCTTACA AAGTGACAGAAACCGAAATCATGGTTCGCTAAGACAAAGCATGCGCTGAATCCTGATGGG TGAACAATTCTAGTTTGGCCATCAGCTCATCGCCGACTACAAATTTTCATCTTAGAGTTT ATTTTTAATAATTTTTAATGTTTGGTTATATATATGAATATCTAATTAAACTCAAATACA TTTCTAACATGAACATTGGTGTTATGT