Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0315600-03
CDS Infomation	cds chromosome:IRGSP-1.0:2:12503308:12506137:-1 gene:Os02g0315600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:basic helix-loop-helix protein 139 description:Helix-loop-helix DNA-binding domain containing protein. (Os02t0315600-01);Helix-loop-helix DNA-binding domain containing protein. (Os02t0315600-02);Helix-loop-helix DNA-binding domain containing protein. (Os02t0315600-03)
Sequence	ATGCAGGGAGACCACGGGTACTACGGCGGGAGGGACTCGCCGCCGCAGGGGTACGGCTAC GGCGGCGGCTACGGCTACGGAGGCGGGTATGGCTACGACGCCGGTGGGTACTACTCCGGC GGCGGCGGCGGCTACCCGTCGGCTGGGGCGGCGGCGGCGGCGTACGAGGACCCGATGGTC GGGAGGAGGACGCACGACTTCCCGGCGCCGATGAACGAGCTGGAGTTCCAGCCGTCGGCC ACGTGCCCCAAGAACTACGTCATCTTCGACCAGACGTGCACCAAGAGCCGGGTCATGTTC CACCCCTCGCTGGCGCACAAGTTCGGCGGCGGGTCGTCGGCGTACGACAACAACGTGTAC GGCGGCGGCGGAGCGCACGACGCCGCCAAGGGCGCGTACAGGGACAGCGTCGGCTACGAC GACGACGACAGCTGCTCGGTGCGGCAGAAGGAGGACACGGACGAGATCGACGCGCTGCTG AGCTCGGAGGACGGCGACGAGGACGACGTGGTGAGCACGGGGCGCACCCCGGGGTACCGG GACGGCAGCTCCCCGGACTCGACGTGCTCGTCCAGCTACGGCGGCGGGCAGGCGAGGCCC GGGCGCAAGAAGGAGCGCATGAAGAAGATGGTGCGGACGCTCAAGGGCATTATCCCCGGC GGCAACCAGATGGACACGCCGGCCGTGCTCGACGAGGCCGTCCGGTACCTCAAGTCTCTC AAGGTCGAGGTCAAGAAGCTTGGCGTGCGCGGCTCCGACAACTGA

Peptide Sequence

PEP ID	Os02t0315600-03
PEP Infomation	pep chromosome:IRGSP-1.0:2:12503308:12506137:-1 gene:Os02g0315600 transcript:Os02t0315600-03 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:basic helix-loop-helix protein 139 description:Helix-loop-helix DNA-binding domain containing protein. (Os02t0315600-01);Helix-loop-helix DNA-binding domain containing protein. (Os02t0315600-02);Helix-loop-helix DNA-binding domain containing protein. (Os02t0315600-03)
Sequence	MQGDHGYYGGRDSPPQGYGYGGGYGYGGGYGYDAGGYYSGGGGGYPSAGAAAAAYEDPMV GRRTHDFPAPMNELEFQPSATCPKNYVIFDQTCTKSRVMFHPSLAHKFGGGSSAYDNNVY GGGGAHDAAKGAYRDSVGYDDDDSCSVRQKEDTDEIDALLSSEDGDEDDVVSTGRTPGYR DGSSPDSTCSSSYGGGQARPGRKKERMKKMVRTLKGIIPGGNQMDTPAVLDEAVRYLKSL KVEVKKLGVRGSDN

Transcript Sequence

Transcript ID	Os02t0315600-03
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:12503308:12506137:-1 gene:Os02g0315600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:basic helix-loop-helix protein 139 description:Helix-loop-helix DNA-binding domain containing protein. (Os02t0315600-01);Helix-loop-helix DNA-binding domain containing protein. (Os02t0315600-02);Helix-loop-helix DNA-binding domain containing protein. (Os02t0315600-03)
Sequence	AAGTGTCGCACAAGGTGATATTGCTTGTGCAGCTGTCAAGCTCGCGTCAACCAACCATAT CTTATGACCTCTTACTATTTGTGATATATTAACTGACTCAGCCACATTTCCATGGACACA CTGAGTATACTGCTAAACAGAATTAATTAAGTTCTCTGTTGTGCTGAACCTCTTGAAGAC TTGTTGCGTGTCATGTTGTTGTTAACTTGGTATGGTGTTGTGCCACTGCATGCCCACTCC TGGAGTAGATTGCACGGCATGCCAAACAAACATTGCGCCCGATCACGCGCGACTTTGCCT AGCTAGCTAGTGCATTTTGCTTGCACGCGCTCAGTCCGGATCGCGGCGTGCCCTTCTTTT CCCAAAAAACGCTACTAAAATTAGGCCGCTTTCCCCCCTTCTCTCCCTGCTTGTGTTCAC AGCAATAGCAGCTCGGGTTGGCTTGGGACACTTAAAATATTGGAGCAGAGCAGCAGCAGC AGTAGTAGGCACCACTATGAATTGCAAGTTGCCTTGTCCCCTGTTTGCACTCTCACGAAA CCGTTAGTTCTGTGCACATCTTTCCGGGCATGCCCCACCTTGTGTGGACAACAGTATGTT GTATGCAATGTGTGTGTGGGGTAGGCCAAAGTTGGTGGTACTTGCAAACAAAAAGTCGCT TTAATCTCGCACCAGTTGCTTGACCACTACAGGAACCGAGATGCGTTGCCATTTTGCCTA TTCTGATGATGCCATGATCTGGGGTATATTTCTGATGTGTTGTTTTGGATTTGTGATCGT GCAGGCCGAGTACTTCCGTCACCTTCTCAAGCCCGTGACGTAGGTTGACCAGTACATAAT CCTCCTCCCTTCTTCACCCGACGAGAGAGCTAGCTGCGCAGCTTCTCTCACAAGGAAAAA AACAGAGGAGACAAACAGAGTTTGGAAGTTAAGAGCAGAAGAAGATGCAGGGAGACCACG GGTACTACGGCGGGAGGGACTCGCCGCCGCAGGGGTACGGCTACGGCGGCGGCTACGGCT ACGGAGGCGGGTATGGCTACGACGCCGGTGGGTACTACTCCGGCGGCGGCGGCGGCTACC CGTCGGCTGGGGCGGCGGCGGCGGCGTACGAGGACCCGATGGTCGGGAGGAGGACGCACG ACTTCCCGGCGCCGATGAACGAGCTGGAGTTCCAGCCGTCGGCCACGTGCCCCAAGAACT ACGTCATCTTCGACCAGACGTGCACCAAGAGCCGGGTCATGTTCCACCCCTCGCTGGCGC ACAAGTTCGGCGGCGGGTCGTCGGCGTACGACAACAACGTGTACGGCGGCGGCGGAGCGC ACGACGCCGCCAAGGGCGCGTACAGGGACAGCGTCGGCTACGACGACGACGACAGCTGCT CGGTGCGGCAGAAGGAGGACACGGACGAGATCGACGCGCTGCTGAGCTCGGAGGACGGCG ACGAGGACGACGTGGTGAGCACGGGGCGCACCCCGGGGTACCGGGACGGCAGCTCCCCGG ACTCGACGTGCTCGTCCAGCTACGGCGGCGGGCAGGCGAGGCCCGGGCGCAAGAAGGAGC GCATGAAGAAGATGGTGCGGACGCTCAAGGGCATTATCCCCGGCGGCAACCAGATGGACA CGCCGGCCGTGCTCGACGAGGCCGTCCGGTACCTCAAGTCTCTCAAGGTCGAGGTCAAGA AGCTTGGCGTGCGCGGCTCCGACAACTGATCATCATCATCTCCAACACCGGCAGAACGGA GGAAACAAACAAACAAAAAAAAAAGAGAGGCAGCTGCAGCGGCAGCAACAGCACCAGCAG TCAGCAGCAGCGATCGAGTGCTACTACTGACAGTACACTGCATCTGCATGCACGACATGT ACCCTACTCCATCATCCTCCATTTCTCCATGCCTTGGGTCGGCATTGGCATCGCCAAGCT AGCCATAGCTAGTTGATGCCCTTTTCGCAGTGCCATGATCTGGCCAAACTCTTTTTGTGC GCTCTACTTTTGGCTACGGGCTTTATGCTCCGTCCATGATGAGAGAGGGAGCATGGGAGG GGGCAGAGGAGAGGCAGCGATCATCATCAATGTACTACTAGTACTAGCTAGTGCTCATTT GCTTTGGGTGTACTATAGTAGTAGTGGAGAGATGATGGATATGGATTATGGAGTTCTAGT TAGGCAGAGGAGAGGAGAGGGAGAAGGGCAGCATTGCAATCGCATATTTGCATGCTTTGG CTTTGTCTGCTACTACTCCTCTTCATTTGTTGCCTTGCTTGCTTTTTTCCTTTCTGCCCC TGCCATGTGGCCCCCCCTTCCCCTGCTGGATGAATTATCCATTGATGATCCCCTCCTTCG TTAGCTTGACGTGTTCAGTTATACTGGTTACTGTTTCTGCCTTTGTCTTGTTCCATTTGG TCTCTCCATCCATCGATCCATGAACTAGCATGATGCCATGATCCATGCATGCATGGATGG ATGCACTGCTGGTGCTTACACTCTCAATATGCCATCATTGTGACGATGTGTGGGTGTGCT GCTAGCTCATGATGGCGATGGCACGTTGCCACCCCGTCTCCCGTGGGTATATGTTTGTGT GCATGCTTTGCTTGCTTGTGTAATGCACAGCATGTTCATGTTGGGGTTGGCACTAGCGGG AGCCTGCCTTTTTGGCGAGAAGTGATCGAGCAAGCATCGATCCCATCCCGGCCGTCTCTC GCCCCCTTTTGTTCTAGCTAGCTAGTGCTCGAATCCCACACGGGAAAAGGGGGGTTTAGC AATGTCAACTTGATGCATGCTTGGTAAAAGTTGTCCTAATGATGCTCATTAACTATTAGT TGTTCCTGCT