Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0314300-00
CDS Infomation	cds chromosome:IRGSP-1.0:2:12432303:12448557:1 gene:Os02g0314300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Ca(2+)/H(+) EXCHANGER 1C description:Sodium/calcium exchanger membrane region domain containing protein. (Os02t0314300-00)
Sequence	ATGGCGCCGCCGGAGAGCAGCCACCACCATCTCCTGGAGAGTGGCCTGCTTGAAGTCAGC AAGGCACCGTCGGCGGCGGTGGCTGCCGAGGAAGAGGAGAAGAAGGAGGCGGCGGCGTGG ACACCGTCGTCGTCGTCGTCGATGACGGGGCGGAAGATCAAGTCTGAGGCGTCGCCGCTG CTGCGGCGGCTGCTGGGGGGCCCGGCGGCGCAGCTGCAGGAGGTGCTCCTGGGCACGAAG CTGTACCCGCTCTTCTCCGCCGTGCCGCTCGCCGTCGCCGCCGAGTCCCTCCGCCTCGGC CGGGTTTGGGTGTTTGCCTTCAGCTTGATAGGCCTGGCACCGCTTGCAGAACGTGTGAGC TTCCTGAGCGAACATATTGCCAATACTGTAGGACCAACAGCTGGTGGGATTATGAATGCA ACATGTGGGAATGTACCTGAATTAATCATTGCACTGTTCGCTCTGCATAAGAATAAGATG GAAATTCTCAAGTGGTCACTGTTAGGTTCCATCTTATCAAATTTGTTACTTGTTCTTGGT TCATCACTCCTCTTTGGAGGGATCGTTAATATCGGCAAGGAGCGTCCACTAGATAAGAGA CAAGCAGATGTAAGCATAGGCCTTCTGTTGTTGGGTGTTCTTTGTCATATTGCTACCCTA GTGTCTAAATACACAAGTAGCACCGGAGATAGCATAAACTCAAGCTCAGTTATGCAATTA TCAAGATCATGCGCTATAGTAATGCTAATTGCTTACTTTGGAAGCCTCATGTTCCAGTTG AAAACTCATCGTCAAATATTTGAGCTTGAAGAGGACAGTTCAGATAGCAGTAGCAGTGAA GATGATGCTACAGACAAATCAGTTATAGGATTTGCCAGTGCAATGGTCTGGTTGATAGGG ATGGCCGTAGTCACTGCTATGTTGTCTAGTTATGTTGTTACTACAATAGAGGAAGCATCA GAATCAATGGGTATCCCTGTCAGGTTCATTAGTATTATCCTACTACCTATTGTTGGAAAT GCAGCAGAGCATGCAGGCGCTATCATATTTGCCTTCAAGAACAAAATCGATATCAGTCTG GGAATTACTCTTGGATCAGCAACTCAAATATCGATGCTTGTGGTACCAGTCATTCTAATT GTGTCCTGGGTGAATGCCATCCCTATGGATCTTGACTTCAACCTTCTTGAGACTGGATCA TTGGCAATGGCAGTAATCACCACCGCATTTACACTTCAGGATGACAAATGGCATTACTTG AAGGGTTTGAATCTAGTATTTTCCTATATCGTCATAGCGGTGTGCTTTTTCGTCATGAAA GCTCTCCCAACGCTAAAAAAGGAAGATGACTAA

Peptide Sequence

PEP ID	Os02t0314300-00
PEP Infomation	pep chromosome:IRGSP-1.0:2:12432303:12448557:1 gene:Os02g0314300 transcript:Os02t0314300-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Ca(2+)/H(+) EXCHANGER 1C description:Sodium/calcium exchanger membrane region domain containing protein. (Os02t0314300-00)
Sequence	MAPPESSHHHLLESGLLEVSKAPSAAVAAEEEEKKEAAAWTPSSSSSMTGRKIKSEASPL LRRLLGGPAAQLQEVLLGTKLYPLFSAVPLAVAAESLRLGRVWVFAFSLIGLAPLAERVS FLSEHIANTVGPTAGGIMNATCGNVPELIIALFALHKNKMEILKWSLLGSILSNLLLVLG SSLLFGGIVNIGKERPLDKRQADVSIGLLLLGVLCHIATLVSKYTSSTGDSINSSSVMQL SRSCAIVMLIAYFGSLMFQLKTHRQIFELEEDSSDSSSSEDDATDKSVIGFASAMVWLIG MAVVTAMLSSYVVTTIEEASESMGIPVRFISIILLPIVGNAAEHAGAIIFAFKNKIDISL GITLGSATQISMLVVPVILIVSWVNAIPMDLDFNLLETGSLAMAVITTAFTLQDDKWHYL KGLNLVFSYIVIAVCFFVMKALPTLKKEDD

Transcript Sequence

Transcript ID	Os02t0314300-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:12432303:12448557:1 gene:Os02g0314300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Ca(2+)/H(+) EXCHANGER 1C description:Sodium/calcium exchanger membrane region domain containing protein. (Os02t0314300-00)
Sequence	CACGCGTGTGTTTTTTGATCGATTCAATTCCTCGCGTCGCGCGACATGGCGCCGCCGGAG AGCAGCCACCACCATCTCCTGGAGAGTGGCCTGCTTGAAGTCAGCAAGGCACCGTCGGCG GCGGTGGCTGCCGAGGAAGAGGAGAAGAAGGAGGCGGCGGCGTGGACACCGTCGTCGTCG TCGTCGATGACGGGGCGGAAGATCAAGTCTGAGGCGTCGCCGCTGCTGCGGCGGCTGCTG GGGGGCCCGGCGGCGCAGCTGCAGGAGGTGCTCCTGGGCACGAAGCTGTACCCGCTCTTC TCCGCCGTGCCGCTCGCCGTCGCCGCCGAGTCCCTCCGCCTCGGCCGGGTTTGGGTGTTT GCCTTCAGCTTGATAGGCCTGGCACCGCTTGCAGAACGTGTGAGCTTCCTGAGCGAACAT ATTGCCAATACTGTAGGACCAACAGCTGGTGGGATTATGAATGCAACATGTGGGAATGTA CCTGAATTAATCATTGCACTGTTCGCTCTGCATAAGAATAAGATGGAAATTCTCAAGTGG TCACTGTTAGGTTCCATCTTATCAAATTTGTTACTTGTTCTTGGTTCATCACTCCTCTTT GGAGGGATCGTTAATATCGGCAAGGAGCGTCCACTAGATAAGAGACAAGCAGATGTAAGC ATAGGCCTTCTGTTGTTGGGTGTTCTTTGTCATATTGCTACCCTAGTGTCTAAATACACA AGTAGCACCGGAGATAGCATAAACTCAAGCTCAGTTATGCAATTATCAAGATCATGCGCT ATAGTAATGCTAATTGCTTACTTTGGAAGCCTCATGTTCCAGTTGAAAACTCATCGTCAA ATATTTGAGCTTGAAGAGGACAGTTCAGATAGCAGTAGCAGTGAAGATGATGCTACAGAC AAATCAGTTATAGGATTTGCCAGTGCAATGGTCTGGTTGATAGGGATGGCCGTAGTCACT GCTATGTTGTCTAGTTATGTTGTTACTACAATAGAGGAAGCATCAGAATCAATGGGTATC CCTGTCAGGTTCATTAGTATTATCCTACTACCTATTGTTGGAAATGCAGCAGAGCATGCA GGCGCTATCATATTTGCCTTCAAGAACAAAATCGATATCAGTCTGGGAATTACTCTTGGA TCAGCAACTCAAATATCGATGCTTGTGGTACCAGTCATTCTAATTGTGTCCTGGGTGAAT GCCATCCCTATGGATCTTGACTTCAACCTTCTTGAGACTGGATCATTGGCAATGGCAGTA ATCACCACCGCATTTACACTTCAGGATGACAAATGGCATTACTTGAAGGGTTTGAATCTA GTATTTTCCTATATCGTCATAGCGGTGTGCTTTTTCGTCATGAAAGCTCTCCCAACGCTA AAAAAGGAAGATGACTAAATGTGTTGTTTTGAACCGAATCAAGAGACCGATGAGACGATG CATGCATGTGAGTTGAAGACTGTAGCTAGATCGGTGAGCTCCTGATCAAGCTGTTCATCA TCATGACGGGTTCAGCTAATTAATCAGCAACAACAGCAGTGAATATATGGTAGGTTCATC TGAAGCGACGGGAACAAGATTACTGATAGATGTTTTGATTGCTTTGGTGTTTTCAGGTGA TTAGTGTAGATTTGGGAAATGATCTTGAGGTATTCGTAGGATGGTGTTTTTAGTGTAAAC CATTTATTGGGTCAATGCGTTATCTTCTTTATTAACGAAAGGAGGCAGAGCTTCTGCCTT TATTTTAACAAACAAGATCACAGTAGCCTTGGTTCTTTTGCCTATCCTAGTGTGG