Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0313700-02
CDS Infomation	cds chromosome:IRGSP-1.0:2:12398146:12405048:-1 gene:Os02g0313700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to NTMC2T6.1/NTMC2TYPE6.1. (Os02t0313700-01);Similar to Synaptotagmin C (Synaptic vesicle protein O-p65-C). (Os02t0313700-02)
Sequence	ATGGACATAACGGAGGTGACGGTGGTGCACCACGCGGCGCTGGTGCTGCTCGCGCTCTGG GCCGCCGTGTCGGCCGGGTGGGCGCACCCGGCGATCTTCCTCGCCGCGCTCCTCTATCTG TTCGCGGTGAATGAACGATACACAATGAGGCTGCGAAAGCGAATACAACATGAGGAAAGG AAATGTGCAAACCAAAGAAGGCTTCTCTCTGATGCAGAGACTGTCAGGTGGTTGAATTAT GCTGTTGAGAAGATCTGGCCGGTTTGCATGGAACGGGTTGCATCTGAGCAGTTCCTTTTG CCCATATTCCCATGGTTCCTGGAAAAGTTCAAACCATGGACAGCGAGGAAAGCAGTGATC CAAGACCTTTACTTGGGCAGGAACCCACCAATGTTTACAGATATTAGGGTTGTCAGGCAA TCAACTGATGATGACCATCTGGTTTTAGAGATAGGAATGAACTTCCTATCTGCAGATGAT ATGAATGCAACAATGGCTGTGCAACTTAGGAAGAGATTAGGATTTGGCATCACAGCAAAC ATGCATATAACTGGGATGCATGTTGAAGGGAAGGTCCTAGTTGGGGTGCGATTTCTCCGA CAGTGGCCATATATTGGTCGCGTAAGAGTGTGCTTTGTTGAGCCTCCATACTTCCAGATG ACAGTCAAACCATTATTTGGTCATGGGCTTGATGTAACTGAACTTCCAGGAATTTCTGGA TGGCTTGACAGGATGTTGGATGTCGCCTTTGGACAGACCCTTGTTGAGCCTAATATGCTA GTTATTGACTTGGAAAAGTTTGCATCGGAATCAACAGATAGCTGGTTTAGTGTTGATGAG AAGCCACCTATTGCACATGCCAAGGTAGAGATCTTGGAAGGTGCTGATATGAAACCCTCT GATCCAAATGGATTAGCTGATCCATACGTGAAAGGCCATCTTGGACCCTATCGTTTCCAG ACAAAGATCCACAAGAAAACACTCAATCCAAAATGGATGGAGGAGTTCAAAATACCAGTA ACCTCATGGGCAGCTCTCAATCTTCTCTCTCTTCAAGTTCGAGATAAGGATCCCATCTTT GACGACACACTCGGTGACTGTTCCATAAGCATCAACAAATTGAGAGGTGGACAAAGGCAC GACATATGGATTGCTCTGAAGAATATAAAGACAGGGCGGATTCATATAGCAGTAACAGTA CTTGAAGATGAAAATGAAAAGGTTCCAAACGATGACGATGAGCAGTGTGGAACACCCAAG GGGGGTAAAGCAAGCACACCAAGGTCTAGCTTTTCGTCCAGGACCAACAATGAAAGTGAA TCATCAGAGGAGTTTCGAAAGATATCTGCTGAATATGAGCCAGTAGACATTGAAGGACTG GAAAAGGTTGATGTTTGGGTCCATCGGCCAGGCAGTGATGTCGCAGTCACTTGGGAGCCT CGGAAAGGACGTGCGAGGTGTCAGGATTCCAGAATCCTACGAGAGAATGATGTCTACTGT GACAGCCCTAAGTCGTGCCAATCAGAATCTCAGAGAAGTGACTCCAGTACTGAAGAACCA GCCAATGGCAAATCACGCCATCATCTCCACAAGGTCAAAAAGGGTTTGGGGAAACTAGCT GGTGCGATGTTCAAGAGCCCAAAGAAAGAGAGTGATGATGAAGCCTCGCCATGTGTGACG CCTCACCCAAATATAAAACCACTTGGAGAAAAAAGGGTGTCAGTAAGATACGTCGTCGAT GAAGATCCTTCTGAAAACTTGCCAGATGACCAGCATTCCAGTCCTGAGAGAGGCGAGTCG GAAAGTCCGACCAAGAGGCATTTGAGGAAGAAGGCTGTGCACATGGTGAAACATGCGGGG AACAAAACAGCTCATAATCTGAAGAACATGTTCAGCAGGAAAGGCAGTGACAAGAGCAAA GAAGGCCAAGATGACCAGAAAGACGATCCTGATACTATAGTAGTAGAACCTTCAAAAGTT AAGAAAGACAATCCTGATGCAAGTGAGGTAGACATAGACCCTTCACAAGTTGAGAACGAC ATCCCCGATTCAACGGCAATTGACCCTTTGAAGGTTGATTCTAATGTGGCCAACAACATT GTGGTTGATGCACTAGAGTATGCATCTGAATCTGATGCGAAGGACAAACCACAGTGA

Peptide Sequence

PEP ID	Os02t0313700-02
PEP Infomation	pep chromosome:IRGSP-1.0:2:12398146:12405048:-1 gene:Os02g0313700 transcript:Os02t0313700-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to NTMC2T6.1/NTMC2TYPE6.1. (Os02t0313700-01);Similar to Synaptotagmin C (Synaptic vesicle protein O-p65-C). (Os02t0313700-02)
Sequence	MDITEVTVVHHAALVLLALWAAVSAGWAHPAIFLAALLYLFAVNERYTMRLRKRIQHEER KCANQRRLLSDAETVRWLNYAVEKIWPVCMERVASEQFLLPIFPWFLEKFKPWTARKAVI QDLYLGRNPPMFTDIRVVRQSTDDDHLVLEIGMNFLSADDMNATMAVQLRKRLGFGITAN MHITGMHVEGKVLVGVRFLRQWPYIGRVRVCFVEPPYFQMTVKPLFGHGLDVTELPGISG WLDRMLDVAFGQTLVEPNMLVIDLEKFASESTDSWFSVDEKPPIAHAKVEILEGADMKPS DPNGLADPYVKGHLGPYRFQTKIHKKTLNPKWMEEFKIPVTSWAALNLLSLQVRDKDPIF DDTLGDCSISINKLRGGQRHDIWIALKNIKTGRIHIAVTVLEDENEKVPNDDDEQCGTPK GGKASTPRSSFSSRTNNESESSEEFRKISAEYEPVDIEGLEKVDVWVHRPGSDVAVTWEP RKGRARCQDSRILRENDVYCDSPKSCQSESQRSDSSTEEPANGKSRHHLHKVKKGLGKLA GAMFKSPKKESDDEASPCVTPHPNIKPLGEKRVSVRYVVDEDPSENLPDDQHSSPERGES ESPTKRHLRKKAVHMVKHAGNKTAHNLKNMFSRKGSDKSKEGQDDQKDDPDTIVVEPSKV KKDNPDASEVDIDPSQVENDIPDSTAIDPLKVDSNVANNIVVDALEYASESDAKDKPQ

Transcript Sequence

Transcript ID	Os02t0313700-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:12398146:12405048:-1 gene:Os02g0313700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to NTMC2T6.1/NTMC2TYPE6.1. (Os02t0313700-01);Similar to Synaptotagmin C (Synaptic vesicle protein O-p65-C). (Os02t0313700-02)
Sequence	TCGATCGCGGCTTGTCTCTTCCCCTTCCCTCTGCCTGGCGTGGAGTACTACTGCGCTACT AGAGAGTTTGCTGGTGGAGGAGGAGGACGAGGAGGAGGAGGCTGGGTGGTGGCGGCCGCC GCGATGGACATAACGGAGGTGACGGTGGTGCACCACGCGGCGCTGGTGCTGCTCGCGCTC TGGGCCGCCGTGTCGGCCGGGTGGGCGCACCCGGCGATCTTCCTCGCCGCGCTCCTCTAT CTGTTCGCGGTGAATGAACGATACACAATGAGGCTGCGAAAGCGAATACAACATGAGGAA AGGAAATGTGCAAACCAAAGAAGGCTTCTCTCTGATGCAGAGACTGTCAGGTGGTTGAAT TATGCTGTTGAGAAGATCTGGCCGGTTTGCATGGAACGGGTTGCATCTGAGCAGTTCCTT TTGCCCATATTCCCATGGTTCCTGGAAAAGTTCAAACCATGGACAGCGAGGAAAGCAGTG ATCCAAGACCTTTACTTGGGCAGGAACCCACCAATGTTTACAGATATTAGGGTTGTCAGG CAATCAACTGATGATGACCATCTGGTTTTAGAGATAGGAATGAACTTCCTATCTGCAGAT GATATGAATGCAACAATGGCTGTGCAACTTAGGAAGAGATTAGGATTTGGCATCACAGCA AACATGCATATAACTGGGATGCATGTTGAAGGGAAGGTCCTAGTTGGGGTGCGATTTCTC CGACAGTGGCCATATATTGGTCGCGTAAGAGTGTGCTTTGTTGAGCCTCCATACTTCCAG ATGACAGTCAAACCATTATTTGGTCATGGGCTTGATGTAACTGAACTTCCAGGAATTTCT GGATGGCTTGACAGGATGTTGGATGTCGCCTTTGGACAGACCCTTGTTGAGCCTAATATG CTAGTTATTGACTTGGAAAAGTTTGCATCGGAATCAACAGATAGCTGGTTTAGTGTTGAT GAGAAGCCACCTATTGCACATGCCAAGGTAGAGATCTTGGAAGGTGCTGATATGAAACCC TCTGATCCAAATGGATTAGCTGATCCATACGTGAAAGGCCATCTTGGACCCTATCGTTTC CAGACAAAGATCCACAAGAAAACACTCAATCCAAAATGGATGGAGGAGTTCAAAATACCA GTAACCTCATGGGCAGCTCTCAATCTTCTCTCTCTTCAAGTTCGAGATAAGGATCCCATC TTTGACGACACACTCGGTGACTGTTCCATAAGCATCAACAAATTGAGAGGTGGACAAAGG CACGACATATGGATTGCTCTGAAGAATATAAAGACAGGGCGGATTCATATAGCAGTAACA GTACTTGAAGATGAAAATGAAAAGGTTCCAAACGATGACGATGAGCAGTGTGGAACACCC AAGGGGGGTAAAGCAAGCACACCAAGGTCTAGCTTTTCGTCCAGGACCAACAATGAAAGT GAATCATCAGAGGAGTTTCGAAAGATATCTGCTGAATATGAGCCAGTAGACATTGAAGGA CTGGAAAAGGTTGATGTTTGGGTCCATCGGCCAGGCAGTGATGTCGCAGTCACTTGGGAG CCTCGGAAAGGACGTGCGAGGTGTCAGGATTCCAGAATCCTACGAGAGAATGATGTCTAC TGTGACAGCCCTAAGTCGTGCCAATCAGAATCTCAGAGAAGTGACTCCAGTACTGAAGAA CCAGCCAATGGCAAATCACGCCATCATCTCCACAAGGTCAAAAAGGGTTTGGGGAAACTA GCTGGTGCGATGTTCAAGAGCCCAAAGAAAGAGAGTGATGATGAAGCCTCGCCATGTGTG ACGCCTCACCCAAATATAAAACCACTTGGAGAAAAAAGGGTGTCAGTAAGATACGTCGTC GATGAAGATCCTTCTGAAAACTTGCCAGATGACCAGCATTCCAGTCCTGAGAGAGGCGAG TCGGAAAGTCCGACCAAGAGGCATTTGAGGAAGAAGGCTGTGCACATGGTGAAACATGCG GGGAACAAAACAGCTCATAATCTGAAGAACATGTTCAGCAGGAAAGGCAGTGACAAGAGC AAAGAAGGCCAAGATGACCAGAAAGACGATCCTGATACTATAGTAGTAGAACCTTCAAAA GTTAAGAAAGACAATCCTGATGCAAGTGAGGTAGACATAGACCCTTCACAAGTTGAGAAC GACATCCCCGATTCAACGGCAATTGACCCTTTGAAGGTTGATTCTAATGTGGCCAACAAC ATTGTGGTTGATGCACTAGAGTATGCATCTGAATCTGATGCGAAGGACAAACCACAGTGA AATGTGTTCTGCTATTTTTGGCGGTCCTCGTGCTGTTGGGACTGTTCATGTAGGCAGGAT ACTAGGTAGCAAAATAGTCTGATAGCCTCCTGACAGCAAGCGAAGGTTGACAGTATAGTC CGTTTGGTTGGTTGAGTCCTCCATCTTACCTGACGACCGATGTTTTTCTTGTATTATAGA TGCTCAAGGAACAATACCTCTGTACATGTCGTATGCAGACTGTCTAAGCTGTTTGCTTCT TGGACATGGAAAGCAGGTGGCCGGTTGGCTTTGGC