Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0312800-02
CDS Infomation

cds chromosome:IRGSP-1.0:2:12339729:12348527:-1 gene:Os02g0312800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ankyrin repeat containing protein. (Os02t0312800-01);Ankyrin repeat containing protein. (Os02t0312800-02)
Sequence

ATGGCGACCCGCCGCGCGCCGCCACCCGCCGCCGCCGCCGCCGCGGATGGCAGCATCGAG
GAGAACGCGATGGCCATCCTCGACACCGCCGGCATCAAGGACGCCCGCGACCTCCACGAC
GACCGTTGCGCCTTCCTGGAGACCGTGCGCTCCGCCTGCCTTGCCGCCGACAGCCCCTCT
CCCCCTTCGTGGAGAATGTATAATGCCGTTTTCCAGATTCTTCAAGACAGCAGCTCGCTG
GAGCTTACCATGGCAAGTCTCCACCTCTTAATGGAGTTGGGGAAGCAATACCCTAGAGCA
TATTTGACCGATTCTGGTTCTGGCCAAGCTTTAGTGGCAGTTAAAGAGGCATGGTCACCA
TTTCACCTTCGCAGCGATGTTGGTTGTGGTGAGATTGGGGGAAACAACAGGCACTTAGAC
CACCTCTTCGATTCTTCAAGATTTTCATCATTAATCGAGGATATGGTTGAAACAGCTAAT
GACACAGATGCTAATAATGGAATTGAGCATATAAAGAACATGGTGCTGCTTGAATATCTT
GTCAGCACCCTTGAGGCTGATTTTGTACCTCGTCAGATTGCATATAAAGAGTCATTAGAC
TGGGTAATTTTCAGGGAATCTCTTCTACAGATGCTTCTGGTTTCACGGAAGGTGGCATTC
AAATCTTTAGTAAAGAACTGCATATCTTTTCTGCTCAATCAATATAATCAGGGAGTTGAA
GATGGCATATCTTCCAAAGAAGGTTCTGCTAAATCAGCACCTGATCTAGAATCTTCCTTA
GCTATCATATCTTTTGAATTCGAAAGAAAAGCTCTTGCATCAGTTCAGAAACTTTTCACT
ATGGTTATGAACCTTGACTTGATTAGAAAAGAAGCAGACACAATGGGTCTGACTTCAAGA
GCTGATGGGTGCAGGAATCCTATCTTGGACGTTATTTTAGATGAGCTAACTTACAACATA
AGCTATTTATCTCCATTTCTTCTGATCTTTGTGGAATGGAAGTGGAAATTGGAGATTATA
CTTCAGTACTTTTCAAAATATTGTGGCAAGCCTGCAGTTCGTACTCGGAGATCTGATAAT
TCACAACACGATTTGACATTGGAAAATGTACTGACTTTATTTTCAACGGCTGCAACCACA
AAAGCCATTGTTAAAAAGATGAGTTCAGAAGTTGTCCAGCTGCTCTTAGCAAACGCATAC
CAGGTCTGCCTTCATCTGGAATGTGATTCTAGCAAAGATAGTGATACAACAAAGAAGATT
GGAGCGACTCTCCTACAGATATCTGAGAGTTTTGTATCTGCTTTTCATAATATGAGAAAA
ATCAACCCGGATATGCAGCTCTCGCCGTTTGAGAAAGAAGCTCTCTTCACTGCTGCGTCA
ATGGCTAGAGTTCTAAAGAACAAACAAAGATAG

Peptide Sequence

PEP ID

Os02t0312800-02
PEP Infomation

pep chromosome:IRGSP-1.0:2:12339729:12348527:-1 gene:Os02g0312800 transcript:Os02t0312800-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ankyrin repeat containing protein. (Os02t0312800-01);Ankyrin repeat containing protein. (Os02t0312800-02)
Sequence

MATRRAPPPAAAAAADGSIEENAMAILDTAGIKDARDLHDDRCAFLETVRSACLAADSPS
PPSWRMYNAVFQILQDSSSLELTMASLHLLMELGKQYPRAYLTDSGSGQALVAVKEAWSP
FHLRSDVGCGEIGGNNRHLDHLFDSSRFSSLIEDMVETANDTDANNGIEHIKNMVLLEYL
VSTLEADFVPRQIAYKESLDWVIFRESLLQMLLVSRKVAFKSLVKNCISFLLNQYNQGVE
DGISSKEGSAKSAPDLESSLAIISFEFERKALASVQKLFTMVMNLDLIRKEADTMGLTSR
ADGCRNPILDVILDELTYNISYLSPFLLIFVEWKWKLEIILQYFSKYCGKPAVRTRRSDN
SQHDLTLENVLTLFSTAATTKAIVKKMSSEVVQLLLANAYQVCLHLECDSSKDSDTTKKI
GATLLQISESFVSAFHNMRKINPDMQLSPFEKEALFTAASMARVLKNKQR

Transcript Sequence

Transcript ID

Os02t0312800-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:12339729:12348527:-1 gene:Os02g0312800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ankyrin repeat containing protein. (Os02t0312800-01);Ankyrin repeat containing protein. (Os02t0312800-02)
Sequence

TTCTTGTTCCCGCCTCGCCCGCCGTTAACCCCCGAAACCCCGCTCAAAACCCCCCGAAGA
AAATGGCGACCCGCCGCGCGCCGCCACCCGCCGCCGCCGCCGCCGCGGATGGCAGCATCG
AGGAGAACGCGATGGCCATCCTCGACACCGCCGGCATCAAGGACGCCCGCGACCTCCACG
ACGACCGTTGCGCCTTCCTGGAGACCGTGCGCTCCGCCTGCCTTGCCGCCGACAGCCCCT
CTCCCCCTTCGTGGAGAATGTATAATGCCGTTTTCCAGATTCTTCAAGACAGCAGCTCGC
TGGAGCTTACCATGGCAAGTCTCCACCTCTTAATGGAGTTGGGGAAGCAATACCCTAGAG
CATATTTGACCGATTCTGGTTCTGGCCAAGCTTTAGTGGCAGTTAAAGAGGCATGGTCAC
CATTTCACCTTCGCAGCGATGTTGGTTGTGGTGAGATTGGGGGAAACAACAGGCACTTAG
ACCACCTCTTCGATTCTTCAAGATTTTCATCATTAATCGAGGATATGGTTGAAACAGCTA
ATGACACAGATGCTAATAATGGAATTGAGCATATAAAGAACATGGTGCTGCTTGAATATC
TTGTCAGCACCCTTGAGGCTGATTTTGTACCTCGTCAGATTGCATATAAAGAGTCATTAG
ACTGGGTAATTTTCAGGGAATCTCTTCTACAGATGCTTCTGGTTTCACGGAAGGTGGCAT
TCAAATCTTTAGTAAAGAACTGCATATCTTTTCTGCTCAATCAATATAATCAGGGAGTTG
AAGATGGCATATCTTCCAAAGAAGGTTCTGCTAAATCAGCACCTGATCTAGAATCTTCCT
TAGCTATCATATCTTTTGAATTCGAAAGAAAAGCTCTTGCATCAGTTCAGAAACTTTTCA
CTATGGTTATGAACCTTGACTTGATTAGAAAAGAAGCAGACACAATGGGTCTGACTTCAA
GAGCTGATGGGTGCAGGAATCCTATCTTGGACGTTATTTTAGATGAGCTAACTTACAACA
TAAGCTATTTATCTCCATTTCTTCTGATCTTTGTGGAATGGAAGTGGAAATTGGAGATTA
TACTTCAGTACTTTTCAAAATATTGTGGCAAGCCTGCAGTTCGTACTCGGAGATCTGATA
ATTCACAACACGATTTGACATTGGAAAATGTACTGACTTTATTTTCAACGGCTGCAACCA
CAAAAGCCATTGTTAAAAAGATGAGTTCAGAAGTTGTCCAGCTGCTCTTAGCAAACGCAT
ACCAGGTCTGCCTTCATCTGGAATGTGATTCTAGCAAAGATAGTGATACAACAAAGAAGA
TTGGAGCGACTCTCCTACAGATATCTGAGAGTTTTGTATCTGCTTTTCATAATATGAGAA
AAATCAACCCGGATATGCAGCTCTCGCCGTTTGAGAAAGAAGCTCTCTTCACTGCTGCGT
CAATGGCTAGAGTTCTAAAGAACAAACAAAGATAGGGAGCAGGCTTTGGAAGTGCACATT
CGTTTGATGATTTGCTCTGGCAACTTGTTTTGGTCTTTAAGATAGTAGCATCCTTTGCCA
TCTCATCTATCGTATGCATAATTATGCTTACCTCTGTTCATATTAGTTTATCCTACTACT
ATCTATCTGGAGTTAATGTACATAATTGGAGCATCTGTGTTGAATATCCATTTCACTTAA
CACTTCCTGATATCTGAATGAGGATATCAACTGCTTGGAATTTCCTGATTGGTTAAAAAT
TCCCAAAATGTGCTTGCTCAGTTAATTCCTCTCTCAAGGGGGCTGAAGGGAATTGGAGGA
ATCAATGGTTCACGTCATAATAACAGTCAAAGCAAAACTTGTATTTATGGGCATGTCAAG
TTGTCAACGTTGAGGTAGTGTACTAAGCTTCAATCCACACACACAAACACACACGAGCCA
TGCATATGTGAAGGAACAACTTCTTTCTCCTGTGGTTGTACTATTATGCATACGATTTGC
ATTTCATTGTAGTGCCAAAAGAACAGACTCTTTATATGGTAGCTCACTTTGTACGGGATA
TTCTATTGGTTCCGGTGTCATCTGTCTCTTCAAAGCAAACATTTAGGAAGGTTAGAAGAA
TTATTGAAGAACAGAGATCATGTCTTGCACTCGAGATAAATGATGCAATCTTTTATCGTA
AAGACTAGATGGAGGTAGATCAATGG