Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0312700-01
CDS Infomation

cds chromosome:IRGSP-1.0:2:12335408:12338632:-1 gene:Os02g0312700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to ATP11 protein. (Os02t0312700-01);ATP11 family protein. (Os02t0312700-02)
Sequence

ATGCGGCGGCTACCCCTACGGCTCCTGCGCTCCGCCGCCTCCTCACCCCGACGCCGCCCC
GCTCCCTCCCCTCCCCCCTCGCCGAACCCCGCGGCGCCGCCTGCACTCCTCTCCCGGTGG
GGGTGGGGGTGGGCGCCGCCGCGGAGGGGTTACTCGCGGTTCGCGACCGGGTTCACCCCA
CTGCAGCCCAAGCCGCTCGCCTCCATCCTCGACGTCGAGCGCGCCAGCGGACTCTCCCCC
GACCACCTCGTCGCCGCCTGGGATGACTACCACTTGGGGAGAGGTCATATAGGTGCATCT
ATGAGTGCAAAGCTTTACCATCTTATGGAGCAAAGATCAGCTACATGCCGTCATTTTGTT
ATCCCTTTGTGGAAAGGAACTGGATATACTACCATGTTCATGCAAGTTCAGATGCCGCAT
ATGATCTTCACCGGACTTGAAGACTACAAAGCAAGGGGCACTCAAGCAAGCCCTTACTAT
ACGATCACTCATTATACAGAGTTTGCAGAAACCAAGGATACAGTGCTTATCCGAGGAGAC
GTTGTTTTCACCAGTAAACTGACTGATTCAGAGGCGAAATGTCTTTTAGAGAGTGCTCAC
TCATTCTACCTGAATGATGTGAGGTACAGGCTTGTAGAGCGCTTCAACAAAGAACCACAT
GAGTTTGAGTTCAAAGATGTCCTGCAAGTGCTTGAAATGCCAACCATGTGA

Peptide Sequence

PEP ID

Os02t0312700-01
PEP Infomation

pep chromosome:IRGSP-1.0:2:12335408:12338632:-1 gene:Os02g0312700 transcript:Os02t0312700-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to ATP11 protein. (Os02t0312700-01);ATP11 family protein. (Os02t0312700-02)
Sequence

MRRLPLRLLRSAASSPRRRPAPSPPPSPNPAAPPALLSRWGWGWAPPRRGYSRFATGFTP
LQPKPLASILDVERASGLSPDHLVAAWDDYHLGRGHIGASMSAKLYHLMEQRSATCRHFV
IPLWKGTGYTTMFMQVQMPHMIFTGLEDYKARGTQASPYYTITHYTEFAETKDTVLIRGD
VVFTSKLTDSEAKCLLESAHSFYLNDVRYRLVERFNKEPHEFEFKDVLQVLEMPTM

Transcript Sequence

Transcript ID

Os02t0312700-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:12335408:12338632:-1 gene:Os02g0312700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to ATP11 protein. (Os02t0312700-01);ATP11 family protein. (Os02t0312700-02)
Sequence

CTCCTCACCGGCTTCAACCCACCCGTTTCTCCGGCGATGCGGCGGCTACCCCTACGGCTC
CTGCGCTCCGCCGCCTCCTCACCCCGACGCCGCCCCGCTCCCTCCCCTCCCCCCTCGCCG
AACCCCGCGGCGCCGCCTGCACTCCTCTCCCGGTGGGGGTGGGGGTGGGCGCCGCCGCGG
AGGGGTTACTCGCGGTTCGCGACCGGGTTCACCCCACTGCAGCCCAAGCCGCTCGCCTCC
ATCCTCGACGTCGAGCGCGCCAGCGGACTCTCCCCCGACCACCTCGTCGCCGCCTGGGAT
GACTACCACTTGGGGAGAGGTCATATAGGTGCATCTATGAGTGCAAAGCTTTACCATCTT
ATGGAGCAAAGATCAGCTACATGCCGTCATTTTGTTATCCCTTTGTGGAAAGGAACTGGA
TATACTACCATGTTCATGCAAGTTCAGATGCCGCATATGATCTTCACCGGACTTGAAGAC
TACAAAGCAAGGGGCACTCAAGCAAGCCCTTACTATACGATCACTCATTATACAGAGTTT
GCAGAAACCAAGGATACAGTGCTTATCCGAGGAGACGTTGTTTTCACCAGTAAACTGACT
GATTCAGAGGCGAAATGTCTTTTAGAGAGTGCTCACTCATTCTACCTGAATGATGTGAGG
TACAGGCTTGTAGAGCGCTTCAACAAAGAACCACATGAGTTTGAGTTCAAAGATGTCCTG
CAAGTGCTTGAAATGCCAACCATGTGACAAGATTGAAGACCTGCAATAGCAAAGCTTCCT
GGAGCATGTCAGTGCATTTTTACAGTGGCAGGGTCTAGATTGCACTAATACACTGCGTAT
CACTCTGAGATTGCTAGCTGAACATCAATTCTACGGTTGTGTGGTAGCAATAATACCATA
ATACCATGAGAAAAATTTGTGTAAGTGCTAAGCAGTTACAGCCGTAAGTCCTAGGAGGAA
TTCCTTAACTATCTTCTGCCGTTTCTTTTGAACCTCTTGTCTGCAATAACATGGTGGAAC
CAGAAGTCCAGAACCCTTATCCACTCTCAAAAACCATTGTGTAAACTTAACCTGAAGTCA
GCCGTTATTGTTGCTGTTCTGACTTTTTGTT