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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0308400-04
CDS Infomation

cds chromosome:IRGSP-1.0:2:12113907:12114894:-1 gene:Os02g0308400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 19 description:FAS1 domain domain containing protein. (Os02t0308400-02);FAS1 domain domain containing protein. (Os02t0308400-04)
Sequence

ATGGCCTCTCACACCACCCTCATCCTCCTCCTCCCTCTCCTCGCCGCCGCGGCCGTCGCC
GCCGCGGACGTCGCCCCTGCGCCGGCGCCACCTGCGGCGCAGACGATCAACCTCACGGGC
ATCCTCGAGAAGGGCGGGCAGTACAACACGCTGCTCCGCCTCCTCAACGCCACCCGCGTC
GGCGAGCAGCTGGGCAGCCAGCTGAAGACCACCTACGACGGCCTCACCTTCTTCGCGCCG
ACGGACGCCGCCTTCGCCGCGCTGAGGCCGGGCACGCTCAACGGCCTGAGCGACCAGGAG
CAGGTGCAGCTGGTGCTCTACCACGTCCTCCCGCGCTACTACACCCTCGCCACGTTCCAG
ACGGCCAGCAACCCGCTGCGCACGCAGGCCACGGGCCCCGCCGGCGTGTACACCGTCAAC
GTCACCACCACCACGGGGCAGAGCCTCGTCAACGTGTCCACCGGCGTCGCCGCCGTCCCC
CTCGGCACCACGCTCTCCGCCGACTTCCCGCTCGCCGTCTACTCCGTCGACGGCGTGCTC
CTGCCGGAGCAGATGTTCGGGAAGGCCAAGGCTCCCGCGCCGGCCGCCGCGCCCGCGTCC
GCCGCCGGGAAGGGCGCCAATAAGGAGCACAAGAAGGGCGGCGCCATGCCCAAGAATGAG
GTCGCGGCCACCGCGCCGACGGCCGGAGCTGGAGGAGAAGATTCAGATGACAGCGCCACC
ACCAATGCGGTGGCCGTTGCAGGCGCGGCCGGTGTGGTGTGGACTGCTGCTCTCGTGGGG
ATTGCCAATCTTGTCATCGCGTAG

Peptide Sequence

PEP ID

Os02t0308400-04
PEP Infomation

pep chromosome:IRGSP-1.0:2:12113907:12114894:-1 gene:Os02g0308400 transcript:Os02t0308400-04 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 19 description:FAS1 domain domain containing protein. (Os02t0308400-02);FAS1 domain domain containing protein. (Os02t0308400-04)
Sequence

MASHTTLILLLPLLAAAAVAAADVAPAPAPPAAQTINLTGILEKGGQYNTLLRLLNATRV
GEQLGSQLKTTYDGLTFFAPTDAAFAALRPGTLNGLSDQEQVQLVLYHVLPRYYTLATFQ
TASNPLRTQATGPAGVYTVNVTTTTGQSLVNVSTGVAAVPLGTTLSADFPLAVYSVDGVL
LPEQMFGKAKAPAPAAAPASAAGKGANKEHKKGGAMPKNEVAATAPTAGAGGEDSDDSAT
TNAVAVAGAAGVVWTAALVGIANLVIA

Transcript Sequence

Transcript ID

Os02t0308400-04
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:12113907:12114894:-1 gene:Os02g0308400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 19 description:FAS1 domain domain containing protein. (Os02t0308400-02);FAS1 domain domain containing protein. (Os02t0308400-04)
Sequence

ATCCAATAGCGCAGTGACAGTGCCAATGGCCTCTCACACCACCCTCATCCTCCTCCTCCC
TCTCCTCGCCGCCGCGGCCGTCGCCGCCGCGGACGTCGCCCCTGCGCCGGCGCCACCTGC
GGCGCAGACGATCAACCTCACGGGCATCCTCGAGAAGGGCGGGCAGTACAACACGCTGCT
CCGCCTCCTCAACGCCACCCGCGTCGGCGAGCAGCTGGGCAGCCAGCTGAAGACCACCTA
CGACGGCCTCACCTTCTTCGCGCCGACGGACGCCGCCTTCGCCGCGCTGAGGCCGGGCAC
GCTCAACGGCCTGAGCGACCAGGAGCAGGTGCAGCTGGTGCTCTACCACGTCCTCCCGCG
CTACTACACCCTCGCCACGTTCCAGACGGCCAGCAACCCGCTGCGCACGCAGGCCACGGG
CCCCGCCGGCGTGTACACCGTCAACGTCACCACCACCACGGGGCAGAGCCTCGTCAACGT
GTCCACCGGCGTCGCCGCCGTCCCCCTCGGCACCACGCTCTCCGCCGACTTCCCGCTCGC
CGTCTACTCCGTCGACGGCGTGCTCCTGCCGGAGCAGATGTTCGGGAAGGCCAAGGCTCC
CGCGCCGGCCGCCGCGCCCGCGTCCGCCGCCGGGAAGGGCGCCAATAAGGAGCACAAGAA
GGGCGGCGCCATGCCCAAGAATGAGGTCGCGGCCACCGCGCCGACGGCCGGAGCTGGAGG
AGAAGATTCAGATGACAGCGCCACCACCAATGCGGTGGCCGTTGCAGGCGCGGCCGGTGT
GGTGTGGACTGCTGCTCTCGTGGGGATTGCCAATCTTGTCATCGCGTAGAAAGTGTGTGC
TTGTCTTTTTCTCCTTCGCCGTTTTCTTTCGTTTTCGTCGTTGCATATGTTTCATTGCAC
GTGTCCTATTTTGTATGTATGCAAGAGTATTTATATATGTTGATGATGATTCACTCAGTG
AAATTTACTGGCTTCTTTTGGTCTTTCC