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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0301700-00
CDS Infomation

cds chromosome:IRGSP-1.0:2:11694823:11699013:1 gene:Os02g0301700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to predicted protein. (Os02t0301700-00)
Sequence

AAAAGGGAGATGTTTCCAGATTTGGCTCCACTATTGTGGCACTCTTTTGGCACAATTATT
GTGCTGCTACAGGAGATTATAGTAGTCTACCCTGTCCTTTCACCCCCAACATTATCATTA
CTTGCTTCAAGTCGAGTCTGCAATGCGCTTGCACTTCTTCAGTGTGTTGCATCCCATCCC
GAGACTAGGAGCCATTTCTTAAAAGCTCATATTCCATTGTACCTATGTTCATTTTTGGAA
AATACCAGCAAGACCAGACCTTTTGAATACTTGCGGCTGACCAGCTTGGGTGTCATTGGT
GCTCTTGTGAAGGCTGAAGGTACAGAAGTCATCAATTTTCTACTGCAATATGAATTTGTT
CCTCTCTGCCTGCATGCCATGGCGGTAGGCAGTGAGCTTTCAAAAACTGTGGCAACTTTT
ATTATTGAAAAGATTGTCTTGGATGACGCTGGGCTTGGTTACATTTGCGCTACTGCTGAT
CGGTTCTTCGCTGTGGGGACTGCCTTAGCAGGCATGGTGACCTCAATGGATGACAAGCCC
TCCCCAAGGTTGTTGAAGCACATTATCCACTGTTACCTTAGGATCACAGACAATCCTAGG
GGCTTGGAGGCACTGCAGACTTGCCTTCCTACCACACTTATAGATGGGACATTCAACAAT
CTTACTAAGGATGACCCTACAATGCAGCAATGGCTCCAAGAACTGTTGGTCAAAGTGAGG
AGTGGAAAAATGGGAGGACTACCTCCTCCAGTTCAAGGTCACATGCCGAGGGTTTAA

Peptide Sequence

PEP ID

Os02t0301700-00
PEP Infomation

pep chromosome:IRGSP-1.0:2:11694823:11699013:1 gene:Os02g0301700 transcript:Os02t0301700-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to predicted protein. (Os02t0301700-00)
Sequence

KREMFPDLAPLLWHSFGTIIVLLQEIIVVYPVLSPPTLSLLASSRVCNALALLQCVASHP
ETRSHFLKAHIPLYLCSFLENTSKTRPFEYLRLTSLGVIGALVKAEGTEVINFLLQYEFV
PLCLHAMAVGSELSKTVATFIIEKIVLDDAGLGYICATADRFFAVGTALAGMVTSMDDKP
SPRLLKHIIHCYLRITDNPRGLEALQTCLPTTLIDGTFNNLTKDDPTMQQWLQELLVKVR
SGKMGGLPPPVQGHMPRV

Transcript Sequence

Transcript ID

Os02t0301700-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:11694823:11699013:1 gene:Os02g0301700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to predicted protein. (Os02t0301700-00)
Sequence

AGAAAAGGGAGATGTTTCCAGATTTGGCTCCACTATTGTGGCACTCTTTTGGCACAATTA
TTGTGCTGCTACAGGAGATTATAGTAGTCTACCCTGTCCTTTCACCCCCAACATTATCAT
TACTTGCTTCAAGTCGAGTCTGCAATGCGCTTGCACTTCTTCAGTGTGTTGCATCCCATC
CCGAGACTAGGAGCCATTTCTTAAAAGCTCATATTCCATTGTACCTATGTTCATTTTTGG
AAAATACCAGCAAGACCAGACCTTTTGAATACTTGCGGCTGACCAGCTTGGGTGTCATTG
GTGCTCTTGTGAAGGCTGAAGGTACAGAAGTCATCAATTTTCTACTGCAATATGAATTTG
TTCCTCTCTGCCTGCATGCCATGGCGGTAGGCAGTGAGCTTTCAAAAACTGTGGCAACTT
TTATTATTGAAAAGATTGTCTTGGATGACGCTGGGCTTGGTTACATTTGCGCTACTGCTG
ATCGGTTCTTCGCTGTGGGGACTGCCTTAGCAGGCATGGTGACCTCAATGGATGACAAGC
CCTCCCCAAGGTTGTTGAAGCACATTATCCACTGTTACCTTAGGATCACAGACAATCCTA
GGGGCTTGGAGGCACTGCAGACTTGCCTTCCTACCACACTTATAGATGGGACATTCAACA
ATCTTACTAAGGATGACCCTACAATGCAGCAATGGCTCCAAGAACTGTTGGTCAAAGTGA
GGAGTGGAAAAATGGGAGGACTACCTCCTCCAGTTCAAGGTCACATGCCGAGGGTTTAAA
CCAACCTGGTTGCTACAAGGCACTGAAATGATAAACTATCCTCATGTGAATTGCAGCTAG
GGAA