Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0293400-01
CDS Infomation	cds chromosome:IRGSP-1.0:2:11157096:11161168:-1 gene:Os02g0293400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SKIP interacting protein 14, SKIPa-interacting protein 14, SKIPa-interacting protein 14 description:Similar to Ubiquitin ligase SINAT5 (EC 6.3.2.-) (Seven in absentia homolog 5). Splice isoform 2. (Os02t0293400-01)
Sequence	ATGGACATGGCGAGCATCGAGTGCGTCTCCTACTCCGACAGCATGGATGACGACGACGAC GATGGCGTCGGCGTCGGCGGCGTCTCCCACCTGCCACGCCCCATCCTCGTCAAGCCCTCC TCCGCCGCCGCCGCCGTCAACGTGGTCGTCGTCTCCGCGGGCAGCGGAGGGGGCGCGGGG GGAGGAGGAGGAGGGGTCGGGGTCGTGGCCGGGGCCCCCGCCGTCCCCCCGGCGACGAGC GTCCACGAGCTGCTCGAGTGCCCCGTCTGCACCAACTCCATGTACCCGCCCATCCACCAG TGCCAAAATGGTCATACTCTGTGTTCAACCTGCAAAACCCGTGTGCACAACCGCTGCCCA ACCTGTCGACAGGAGCTTGGTGATATTAGATGTCTAGCATTGGAGAAAGTGGCTGAATCG CTTGAGCTACCCTGCAAATATTACTCACTAGGTTGTCCAGAAATCTTTCCGTACTACAGC AAACTCAAGCATGAATCACAGTGCAATTTCAGGCCATACAACTGCCCTTATGCTGGCTCT GAATGCTCAGTTGTCGGGGATATTCCTTTCCTAGTTGCTCATCTGAGGGATGACCATAAA GTTGACATGCACTCAGGGTGCACATTCAACCATCGCTATGTTAAGTCAAACCCCAGAGAG GTCGAAAATGCTACTTGGATGTTGACTGTCTTTCACTGCTTTGGGCAGTACTTCTGCTTG CATTTCGAGGCCTTCCAACTTGGAGTGGCTCCGGTTTACATGGCCTTCCTCCGTTTTATG GGCGACGAAAATGATGCCAGGAACTATAGTTATAGCCTTGAGGTTGGCGCGAATGGCCGG AAGATGATATGGGAGGGCACTCCCCGCAGCATAAGGGACAGCCACCGGAAGGTTAGGGAC AGCCATGACGGCCTCATAATTCAGCGGAACATGGCTCTGTTCTTCTCAGGCGGAGAGAGG AAAGAGTTGAAATTGCGGGTCACCGGCCGAATCTGGAAGGAACAGCAGAATCCTGACTCG GGAGCCTGCATTCCAAACCTATTCAGCTGA

Peptide Sequence

PEP ID	Os02t0293400-01
PEP Infomation	pep chromosome:IRGSP-1.0:2:11157096:11161168:-1 gene:Os02g0293400 transcript:Os02t0293400-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SKIP interacting protein 14, SKIPa-interacting protein 14, SKIPa-interacting protein 14 description:Similar to Ubiquitin ligase SINAT5 (EC 6.3.2.-) (Seven in absentia homolog 5). Splice isoform 2. (Os02t0293400-01)
Sequence	MDMASIECVSYSDSMDDDDDDGVGVGGVSHLPRPILVKPSSAAAAVNVVVVSAGSGGGAG GGGGGVGVVAGAPAVPPATSVHELLECPVCTNSMYPPIHQCQNGHTLCSTCKTRVHNRCP TCRQELGDIRCLALEKVAESLELPCKYYSLGCPEIFPYYSKLKHESQCNFRPYNCPYAGS ECSVVGDIPFLVAHLRDDHKVDMHSGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCL HFEAFQLGVAPVYMAFLRFMGDENDARNYSYSLEVGANGRKMIWEGTPRSIRDSHRKVRD SHDGLIIQRNMALFFSGGERKELKLRVTGRIWKEQQNPDSGACIPNLFS

Transcript Sequence

Transcript ID	Os02t0293400-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:11157096:11161168:-1 gene:Os02g0293400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SKIP interacting protein 14, SKIPa-interacting protein 14, SKIPa-interacting protein 14 description:Similar to Ubiquitin ligase SINAT5 (EC 6.3.2.-) (Seven in absentia homolog 5). Splice isoform 2. (Os02t0293400-01)
Sequence	AATTACAAGCCACCCCCACCCAATCCCCCCGCACCACCACACCACCATTACACCCGCAAT CAACCGCCCCCACCACCAAACCACACCACCCCGCAACCCAAACGCTAACGCAACAATCCC CTCCTCTCCAAATCCAATTCCAAATCCCCATCCGCCGCCGCTAATCGGAATCGCGGCGGA TCACCCTCCGCCTCCGACGAGGGTTCGACCCGATCGACTCCCCCTGCCCCGGCGGGCTCG CGGGCGGCGGGCGGGGGGCTGAGCTGAGAGCTGAATTCGGGTTCGATCTGTGGCCATGGA CATGGCGAGCATCGAGTGCGTCTCCTACTCCGACAGCATGGATGACGACGACGACGATGG CGTCGGCGTCGGCGGCGTCTCCCACCTGCCACGCCCCATCCTCGTCAAGCCCTCCTCCGC CGCCGCCGCCGTCAACGTGGTCGTCGTCTCCGCGGGCAGCGGAGGGGGCGCGGGGGGAGG AGGAGGAGGGGTCGGGGTCGTGGCCGGGGCCCCCGCCGTCCCCCCGGCGACGAGCGTCCA CGAGCTGCTCGAGTGCCCCGTCTGCACCAACTCCATGTACCCGCCCATCCACCAGTGCCA AAATGGTCATACTCTGTGTTCAACCTGCAAAACCCGTGTGCACAACCGCTGCCCAACCTG TCGACAGGAGCTTGGTGATATTAGATGTCTAGCATTGGAGAAAGTGGCTGAATCGCTTGA GCTACCCTGCAAATATTACTCACTAGGTTGTCCAGAAATCTTTCCGTACTACAGCAAACT CAAGCATGAATCACAGTGCAATTTCAGGCCATACAACTGCCCTTATGCTGGCTCTGAATG CTCAGTTGTCGGGGATATTCCTTTCCTAGTTGCTCATCTGAGGGATGACCATAAAGTTGA CATGCACTCAGGGTGCACATTCAACCATCGCTATGTTAAGTCAAACCCCAGAGAGGTCGA AAATGCTACTTGGATGTTGACTGTCTTTCACTGCTTTGGGCAGTACTTCTGCTTGCATTT CGAGGCCTTCCAACTTGGAGTGGCTCCGGTTTACATGGCCTTCCTCCGTTTTATGGGCGA CGAAAATGATGCCAGGAACTATAGTTATAGCCTTGAGGTTGGCGCGAATGGCCGGAAGAT GATATGGGAGGGCACTCCCCGCAGCATAAGGGACAGCCACCGGAAGGTTAGGGACAGCCA TGACGGCCTCATAATTCAGCGGAACATGGCTCTGTTCTTCTCAGGCGGAGAGAGGAAAGA GTTGAAATTGCGGGTCACCGGCCGAATCTGGAAGGAACAGCAGAATCCTGACTCGGGAGC CTGCATTCCAAACCTATTCAGCTGAACTGAAATAACAAGAGAGAAGGATTCGGATTCGGA TTCGGTTTAGGTGTATATTGGGTGATGCGTGTGGTGCACCTGTGCCCGCTTCTGTAATTT GTTTGTGTTGCTTCCACTTTTCTTCCACGTAGCCGTTGTGGCCTGCCCTAAATTAGTTAG GGCTGACGTGTGAGGACCATGAAAAAAAAATACGGCTTGAGCTTTGTGGGTTCTGATTGA TCACATGATAAGAAATTTCTCGATTTGTTTCTTTTGCCCTTGTGCCCCATTTTGAGATGG GAGGCCATTATGCTCTTTCTTGCTTGTAATTTGCAACCATTGATCAGAGCATTTTCTGGG TTTGTATGTTTTCATCTATGCTTGATTGGGTATTCGGGTGTTAAGTATCCATCCATGACG AAATGG