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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0291400-00
CDS Infomation

cds chromosome:IRGSP-1.0:2:11057896:11059975:-1 gene:Os02g0291400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CALCINEURIN B-LIKE PROTEIN 8 description:Similar to Calcineurin B-like protein 8. (Os02t0291400-00)
Sequence

ATGGGCTGTGTATCATCAAAGCAGTTCAAAAGAGCTGCACAACATGAGGATCCTGCTATT
CTGGCCAAAGAGACTACATTTTCAGTGAGTGAAGTGGAGGCCCTCTTTGAGCTGTTCAAG
AAGATAAGCCATTCCATATTCAGAGATGGTCTCATTCACAAGGAGGAGTTCCAGCTAGCT
CTCTTCAGGAACAGCAACAAGAAGAACCTTTTCGCCAATCGGATATTTGATCTCTTTGAT
CTGAAGCGCAACGGTGTTATCGATTTCGGGGAGTTCGTTCGATCCCTCAGCATTTTTCAC
CCGGAAACGCCTTTGGGAGACAAGATTGCCTTTGCATTTAGGTTGTATGACCTGAGAGGA
ACTGGATGCATTGAACGTGAAGAGTTGCACGAAATGGTGCTTGCTCTTCTGAATGAATCA
GATCTATTCCTATCTGAAGAAGCTGTAGAACAAATCGTGGATCAGACGTTCAAGCAAGCA
GACTTAAACGATGACGGGAAGATCGACCCCGATGAATGGAAAACGTTTGCGAGTAAAAAC
CCGGCTTTGCTGAAGAACATGACTCTTCCATACCTAAAGGACATAACCATGGTATTCCCC
AGCTTTATTCTGAACTCTGAAGTTTGTGAGGAAGAGTTGTAA

Peptide Sequence

PEP ID

Os02t0291400-00
PEP Infomation

pep chromosome:IRGSP-1.0:2:11057896:11059975:-1 gene:Os02g0291400 transcript:Os02t0291400-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CALCINEURIN B-LIKE PROTEIN 8 description:Similar to Calcineurin B-like protein 8. (Os02t0291400-00)
Sequence

MGCVSSKQFKRAAQHEDPAILAKETTFSVSEVEALFELFKKISHSIFRDGLIHKEEFQLA
LFRNSNKKNLFANRIFDLFDLKRNGVIDFGEFVRSLSIFHPETPLGDKIAFAFRLYDLRG
TGCIEREELHEMVLALLNESDLFLSEEAVEQIVDQTFKQADLNDDGKIDPDEWKTFASKN
PALLKNMTLPYLKDITMVFPSFILNSEVCEEEL

Transcript Sequence

Transcript ID

Os02t0291400-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:11057896:11059975:-1 gene:Os02g0291400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CALCINEURIN B-LIKE PROTEIN 8 description:Similar to Calcineurin B-like protein 8. (Os02t0291400-00)
Sequence

ATGGGCTGTGTATCATCAAAGCAGTTCAAAAGAGCTGCACAACATGAGGATCCTGCTATT
CTGGCCAAAGAGACTACATTTTCAGTGAGTGAAGTGGAGGCCCTCTTTGAGCTGTTCAAG
AAGATAAGCCATTCCATATTCAGAGATGGTCTCATTCACAAGGAGGAGTTCCAGCTAGCT
CTCTTCAGGAACAGCAACAAGAAGAACCTTTTCGCCAATCGGATATTTGATCTCTTTGAT
CTGAAGCGCAACGGTGTTATCGATTTCGGGGAGTTCGTTCGATCCCTCAGCATTTTTCAC
CCGGAAACGCCTTTGGGAGACAAGATTGCCTTTGCATTTAGGTTGTATGACCTGAGAGGA
ACTGGATGCATTGAACGTGAAGAGTTGCACGAAATGGTGCTTGCTCTTCTGAATGAATCA
GATCTATTCCTATCTGAAGAAGCTGTAGAACAAATCGTGGATCAGACGTTCAAGCAAGCA
GACTTAAACGATGACGGGAAGATCGACCCCGATGAATGGAAAACGTTTGCGAGTAAAAAC
CCGGCTTTGCTGAAGAACATGACTCTTCCATACCTAAAGGACATAACCATGGTATTCCCC
AGCTTTATTCTGAACTCTGAAGTTTGTGAGGAAGAGTTGTAA