Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0288100-01
CDS Infomation	cds chromosome:IRGSP-1.0:2:10864069:10867222:-1 gene:Os02g0288100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PECTIN METHYLESTERASE 8 description:Similar to Pectinesterase (EC 3.1.1.11) (Fragment). (Os02t0288100-01)
Sequence	ATGGGCCACGCCGTCGCTCGCCGCCTCATCCTCCTCCTCGTCTTCCTCCCCTGCTTCTTG CTGCCGCTCTCCGGCGCGCACGCCTTCCCGGCCTCGGCGCTGGAGGCGGAGGCTGTGGCG GCGCGCCACCACCGGCTCCGCATTGCGCTCAACGCGACGGCGGTGCACGTGGGGAAGGCG CTCGAGGCCCTGTCGGGCGCCGCCGTCGCGCCGGCCTCCGCTGTGATGACAACGCCGTTC TCGGCGGGCTCCTCCTCCTCCTCGCCCCTCGCCGCCGCCGCGCGCGACGACTGCGCGGAG CTGCTCGAGGACTCCCTCGACCTCCTTGCCGGCGCCGGTGAGCCCAGTGCCGCCCACGAC GACGCGGTCACGTGGCTCTCCGCCGCGCTCACCAACCACGACACCTGCGCCGACAGCCTC AATGAGGCCGGCATCCCCCACGGCGCGGACGCCGCGCCCCACCTTGCCGCCGCCCGCGCC ATGGTCCGCGACTGCCTCACAATGTACGCGGAGGCCGCGTCGGCGGCCATGGCAACCAGC AACAAGGACGGCCTCGCCGGCGTCCCCGTCCGGAACGGCGGCGGGAAGAGCAAGAAGCAG AGGAAGAGAGGGAGAAGAAGAAGAAGAAGCCTCTTCCCGAGGTGGCTGTCGGCGAGGGAC CGGAGGCTGCTGCTGGTCCCCGCGGCGCCATTGGTGGAGAGCGCGGACATGGTGGTGGCG AAGGACGGGACGGGGACGCACCGGACGATCTCGGACGCGGTGAAGGCGGCGCCGGAGCGC AGCGGGCGGCGGACGGTGATACACGTGAAGGCCGGGCGGTACGACGAGAACGTGAAGGTG GGGAGGAAGAAGACGAACCTGGTGTTCGTCGGCGACGGCAAGGGCGTCACTGTCGTGTCC GCCGGCCGCAGCGTCGCCGACAACTTCACCACGTTCCACACCGCCACCTTCGCGGCGTCG GGGAGCGGGTTCATGATGAGGGACATGACGGTGGAGAACTGGGCGGGGCCGGAGAGGCAC CAGGCGGTGGCGCTGCGCGTGAGCGCCGACCGCGCCGCCGTCTACCGGTGCAGCATCATC GGCTACCAGGACACCCTCTACGCCCACTCCAACCGCCACTTCTACCGCGACTGCGACGTC TACGGCACCGTCGACTTCGTCTTCGGCAACGCCGCCGCCGTCCTCCAGCGCTGCAACCTC TGGTCCCGCTCCCCTCTCCCCGGCCAGAAGAACACCGTCACCGCCCAGAACCGCCGCGAT CCCGGCCAATCCACCGGCCTCGTCATCCACGCCTGCCGCGTCGTCCCCTCGCCGCCGCCG CCGTCGACGGCGCCGGCCGTGGCGGCGCCATTGGCGCCGACGTACCTGGGGAGGCCGTGG AAGCTGTACTCGAGGGTGGTGGTGATGATGTCGTACATCGGCGGGCACGTGCCGCCGGAG GGGTGGCTGGCGTGGAACGCGACGTTCGCGCTCGACACGCTCTACTACGGGGAGTACATG AACTACGGCCCCGGGGCCGGGGTCGCCGGGCGCGTGGCGTGGCCGGGCCACCGCGTCATC AACGACAGCGCCGAGGCGGAGCGGTTCACGGTGGCGCGCTTCATCTCCGGCGCGTCGTGG CTGCCGGCCACCGGCGTCTCCTTCCTCTCCGGCCTCTCGCTGTAG

Peptide Sequence

PEP ID	Os02t0288100-01
PEP Infomation	pep chromosome:IRGSP-1.0:2:10864069:10867222:-1 gene:Os02g0288100 transcript:Os02t0288100-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PECTIN METHYLESTERASE 8 description:Similar to Pectinesterase (EC 3.1.1.11) (Fragment). (Os02t0288100-01)
Sequence	MGHAVARRLILLLVFLPCFLLPLSGAHAFPASALEAEAVAARHHRLRIALNATAVHVGKA LEALSGAAVAPASAVMTTPFSAGSSSSSPLAAAARDDCAELLEDSLDLLAGAGEPSAAHD DAVTWLSAALTNHDTCADSLNEAGIPHGADAAPHLAAARAMVRDCLTMYAEAASAAMATS NKDGLAGVPVRNGGGKSKKQRKRGRRRRRSLFPRWLSARDRRLLLVPAAPLVESADMVVA KDGTGTHRTISDAVKAAPERSGRRTVIHVKAGRYDENVKVGRKKTNLVFVGDGKGVTVVS AGRSVADNFTTFHTATFAASGSGFMMRDMTVENWAGPERHQAVALRVSADRAAVYRCSII GYQDTLYAHSNRHFYRDCDVYGTVDFVFGNAAAVLQRCNLWSRSPLPGQKNTVTAQNRRD PGQSTGLVIHACRVVPSPPPPSTAPAVAAPLAPTYLGRPWKLYSRVVVMMSYIGGHVPPE GWLAWNATFALDTLYYGEYMNYGPGAGVAGRVAWPGHRVINDSAEAERFTVARFISGASW LPATGVSFLSGLSL

Transcript Sequence

Transcript ID	Os02t0288100-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:10864069:10867222:-1 gene:Os02g0288100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PECTIN METHYLESTERASE 8 description:Similar to Pectinesterase (EC 3.1.1.11) (Fragment). (Os02t0288100-01)
Sequence	AGCACCTCGTCGACTTCTTCCAGCTTCCATAGCTAGCTAGCTCGGCTCGCCATGGGCCAC GCCGTCGCTCGCCGCCTCATCCTCCTCCTCGTCTTCCTCCCCTGCTTCTTGCTGCCGCTC TCCGGCGCGCACGCCTTCCCGGCCTCGGCGCTGGAGGCGGAGGCTGTGGCGGCGCGCCAC CACCGGCTCCGCATTGCGCTCAACGCGACGGCGGTGCACGTGGGGAAGGCGCTCGAGGCC CTGTCGGGCGCCGCCGTCGCGCCGGCCTCCGCTGTGATGACAACGCCGTTCTCGGCGGGC TCCTCCTCCTCCTCGCCCCTCGCCGCCGCCGCGCGCGACGACTGCGCGGAGCTGCTCGAG GACTCCCTCGACCTCCTTGCCGGCGCCGGTGAGCCCAGTGCCGCCCACGACGACGCGGTC ACGTGGCTCTCCGCCGCGCTCACCAACCACGACACCTGCGCCGACAGCCTCAATGAGGCC GGCATCCCCCACGGCGCGGACGCCGCGCCCCACCTTGCCGCCGCCCGCGCCATGGTCCGC GACTGCCTCACAATGTACGCGGAGGCCGCGTCGGCGGCCATGGCAACCAGCAACAAGGAC GGCCTCGCCGGCGTCCCCGTCCGGAACGGCGGCGGGAAGAGCAAGAAGCAGAGGAAGAGA GGGAGAAGAAGAAGAAGAAGCCTCTTCCCGAGGTGGCTGTCGGCGAGGGACCGGAGGCTG CTGCTGGTCCCCGCGGCGCCATTGGTGGAGAGCGCGGACATGGTGGTGGCGAAGGACGGG ACGGGGACGCACCGGACGATCTCGGACGCGGTGAAGGCGGCGCCGGAGCGCAGCGGGCGG CGGACGGTGATACACGTGAAGGCCGGGCGGTACGACGAGAACGTGAAGGTGGGGAGGAAG AAGACGAACCTGGTGTTCGTCGGCGACGGCAAGGGCGTCACTGTCGTGTCCGCCGGCCGC AGCGTCGCCGACAACTTCACCACGTTCCACACCGCCACCTTCGCGGCGTCGGGGAGCGGG TTCATGATGAGGGACATGACGGTGGAGAACTGGGCGGGGCCGGAGAGGCACCAGGCGGTG GCGCTGCGCGTGAGCGCCGACCGCGCCGCCGTCTACCGGTGCAGCATCATCGGCTACCAG GACACCCTCTACGCCCACTCCAACCGCCACTTCTACCGCGACTGCGACGTCTACGGCACC GTCGACTTCGTCTTCGGCAACGCCGCCGCCGTCCTCCAGCGCTGCAACCTCTGGTCCCGC TCCCCTCTCCCCGGCCAGAAGAACACCGTCACCGCCCAGAACCGCCGCGATCCCGGCCAA TCCACCGGCCTCGTCATCCACGCCTGCCGCGTCGTCCCCTCGCCGCCGCCGCCGTCGACG GCGCCGGCCGTGGCGGCGCCATTGGCGCCGACGTACCTGGGGAGGCCGTGGAAGCTGTAC TCGAGGGTGGTGGTGATGATGTCGTACATCGGCGGGCACGTGCCGCCGGAGGGGTGGCTG GCGTGGAACGCGACGTTCGCGCTCGACACGCTCTACTACGGGGAGTACATGAACTACGGC CCCGGGGCCGGGGTCGCCGGGCGCGTGGCGTGGCCGGGCCACCGCGTCATCAACGACAGC GCCGAGGCGGAGCGGTTCACGGTGGCGCGCTTCATCTCCGGCGCGTCGTGGCTGCCGGCC ACCGGCGTCTCCTTCCTCTCCGGCCTCTCGCTGTAGCTAGCTCAACCATATGCTGCATGC GCATATATATATATACCTGTTGCGTTGGCATGTGCACGCACGTACGTACTTGGGATT