Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0286200-01
CDS Infomation

cds chromosome:IRGSP-1.0:2:10758967:10762460:1 gene:Os02g0286200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Lipase, class 3 family protein. (Os02t0286200-01)
Sequence

ATGGCTGTGGACAGAGATATCTTTGGTATCTCAGGTCCGACATATCTGAATCCTGTTAAT
TGGAACTGTGAGCATAATCGGAGATCTGTGGCTGCATGCTTAGTTCAGGCTGTATATGTT
TTGGAGAGGGACCGGCAACTAGGTCGTCAATCTGTTGAAGCCTTGGGACCTCCTTGGTGG
GAATTCTTCCATTTTGAGTTGATCCGCAAGCTTGTCGATGATGCTGACTTGTCTATTTTC
GGTGCAATATTTGAATTCAATCCTCCTTCAAGTAAAGAATCTTCTGCTGATAATGCACCG
AGATTTGTTATTGCCTTCAGAGGCACTATAACTGAGAAGGAAACCATCTCAAGGGATATC
GCCCTTGACCTCCACCTTGTCCAAAATGGTCTCCATCGGACCTCAAGATTTACAATTGCA
ATGCAAGCTGTCCAAAACGTCGCCTCGGTTTTCCCTGGCTCAAACATCTGGCTAGCTGGG
CACTCACTGGGCGCAGGTATGGCCATCCTTACTGGAAGAAACATGGTTAAAAAGGGTGTG
CTTTTGGAAAGCTATCTCTTCAACCCACCTTTTGTTGCCGCCCCAATCGAGAGGATAAGT
GATGAGAGAGTGAAGCATGGTTTCCGCATTGCAAGAAGTGTAATTACTGCTGGATTAGCC
ATTGCAATGAAAGGAAAAGGCGAGGGGAGCAGCCAGAGGTCTGTTGCAGAAGATTCTTTC
CACATTTTGTCATCATGGACGCCATATCTGTTTGTCAATCCAGGAGACCATATCTGTTCA
GAGTACATCGGCTACTTCCAGCATCGGAAGAACATGGAGGATCTCGGTGCTGGATTTATC
GAGAAGCTCGCAACCCAAAATTCCATAGGAGATCTGTTTTACAAGGCATTAGGATGGGAA
TCGGAACCACTGCACCTTCTTCCATCTGCAGACTTAATTGTCAACGTAAGCCCTTCACCG
GACTTCAAATATGCTCATGGCATCAGCCAGTGGTGGCAGCCTGAGCTGAACTTGCAGTGC
AGTAAATATCGGTACTCTGTAGGTGCATGA

Peptide Sequence

PEP ID

Os02t0286200-01
PEP Infomation

pep chromosome:IRGSP-1.0:2:10758967:10762460:1 gene:Os02g0286200 transcript:Os02t0286200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Lipase, class 3 family protein. (Os02t0286200-01)
Sequence

MAVDRDIFGISGPTYLNPVNWNCEHNRRSVAACLVQAVYVLERDRQLGRQSVEALGPPWW
EFFHFELIRKLVDDADLSIFGAIFEFNPPSSKESSADNAPRFVIAFRGTITEKETISRDI
ALDLHLVQNGLHRTSRFTIAMQAVQNVASVFPGSNIWLAGHSLGAGMAILTGRNMVKKGV
LLESYLFNPPFVAAPIERISDERVKHGFRIARSVITAGLAIAMKGKGEGSSQRSVAEDSF
HILSSWTPYLFVNPGDHICSEYIGYFQHRKNMEDLGAGFIEKLATQNSIGDLFYKALGWE
SEPLHLLPSADLIVNVSPSPDFKYAHGISQWWQPELNLQCSKYRYSVGA

Transcript Sequence

Transcript ID

Os02t0286200-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:10758967:10762460:1 gene:Os02g0286200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Lipase, class 3 family protein. (Os02t0286200-01)
Sequence

ATTCTCCCACGCCCAGATCCACCGCCCCCCGCCTTGCCTCCTCCGCGTCGCCGCGCCAGT
GCGCCCCGCCTCGCCGCCGCCCTCCTCCTCCTCGTCGTCAGGTGTTATGTTTTTCATCAC
TATAAAGTCCAATAAAGTGAAGAGTGACTCTGCATAGCCAGATGGCTGTGGACAGAGATA
TCTTTGGTATCTCAGGTCCGACATATCTGAATCCTGTTAATTGGAACTGTGAGCATAATC
GGAGATCTGTGGCTGCATGCTTAGTTCAGGCTGTATATGTTTTGGAGAGGGACCGGCAAC
TAGGTCGTCAATCTGTTGAAGCCTTGGGACCTCCTTGGTGGGAATTCTTCCATTTTGAGT
TGATCCGCAAGCTTGTCGATGATGCTGACTTGTCTATTTTCGGTGCAATATTTGAATTCA
ATCCTCCTTCAAGTAAAGAATCTTCTGCTGATAATGCACCGAGATTTGTTATTGCCTTCA
GAGGCACTATAACTGAGAAGGAAACCATCTCAAGGGATATCGCCCTTGACCTCCACCTTG
TCCAAAATGGTCTCCATCGGACCTCAAGATTTACAATTGCAATGCAAGCTGTCCAAAACG
TCGCCTCGGTTTTCCCTGGCTCAAACATCTGGCTAGCTGGGCACTCACTGGGCGCAGGTA
TGGCCATCCTTACTGGAAGAAACATGGTTAAAAAGGGTGTGCTTTTGGAAAGCTATCTCT
TCAACCCACCTTTTGTTGCCGCCCCAATCGAGAGGATAAGTGATGAGAGAGTGAAGCATG
GTTTCCGCATTGCAAGAAGTGTAATTACTGCTGGATTAGCCATTGCAATGAAAGGAAAAG
GCGAGGGGAGCAGCCAGAGGTCTGTTGCAGAAGATTCTTTCCACATTTTGTCATCATGGA
CGCCATATCTGTTTGTCAATCCAGGAGACCATATCTGTTCAGAGTACATCGGCTACTTCC
AGCATCGGAAGAACATGGAGGATCTCGGTGCTGGATTTATCGAGAAGCTCGCAACCCAAA
ATTCCATAGGAGATCTGTTTTACAAGGCATTAGGATGGGAATCGGAACCACTGCACCTTC
TTCCATCTGCAGACTTAATTGTCAACGTAAGCCCTTCACCGGACTTCAAATATGCTCATG
GCATCAGCCAGTGGTGGCAGCCTGAGCTGAACTTGCAGTGCAGTAAATATCGGTACTCTG
TAGGTGCATGACATTGGAAAAAATGTCTTAGGAGACCCTTCTTACACTTTCGTTTATTCA
TTGTGGTTCGTTCCACTCTATTGTAGCTGTCAATATGCTGTAATAGATGTTTCTTGAACC
TCTGATTCTGTTGACATGAAAAAAACTTGTAATTTCGTGGAGC