Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0285300-01
CDS Infomation

cds chromosome:IRGSP-1.0:2:10715073:10716741:-1 gene:Os02g0285300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:developmentally regulated plasma membrane polypeptide 2 description:DREPP plasma membrane polypeptide family protein. (Os02t0285300-01)
Sequence

ATGGATTACTGGAAGACCAAGGTTCTGCCGAAGATTAAGGTCGTCTTCGCCAAGGGCGGC
AACGCCAAGAAGGCTGCCGCCGCCGAACTCATCAAGTCGTTTGATGAATCTAAGGAGGGG
ATCAACGGCGAGTTCGAGGAGAAGAAGGCTGACCTCCAGCCCAAGGTCGTCGAGATCTAC
GAGGCTGCTCCTGCGCCGCTCAAGGTTCTGATCAAGGACAGGGCCAAGGTGTCCGGGATC
AAGAAGAACTCCGCCGCCGTCACCAAGTTCGTCGACGATCTCGCCAAAATCGAGTTCCCC
GGAGCGAAGCAACTGAGCGAGGGGATCGCCAAGGTCGGCCCGGCGCTGCTCTCCGGCCCG
GTGTTCGCCACCTTCGAGAAGGTCTCCACGTTGCTCCCCGCCGACGAGGAGGAGATCAAG
CCCAAGGAGGCTACGGCCGCCGCCGCCGAAGAGGAGAAGAAGGAGGAAGCCGCCGCCGCC
GCCGCCGCCACCGACGCCGCCGGCGAGGAGAAGAAGGAAGAAGCCGAGGAGAAGAAAGAA
GAAGAGGCCGCCGCCCCCGCCGACGAGCCAGCTGCAGCCGCCGGTGAGAGCGCACCTGCC
GCCGCCGAGGCCGAGCCCCCAGTCGAGGCCGCAGCGACGCCGGCGGCCGCTGAGGCGGCG
CCGGCGAAGGCCGAGGAGGAGGAGGCACCAAAGGCCTAA

Peptide Sequence

PEP ID

Os02t0285300-01
PEP Infomation

pep chromosome:IRGSP-1.0:2:10715073:10716741:-1 gene:Os02g0285300 transcript:Os02t0285300-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:developmentally regulated plasma membrane polypeptide 2 description:DREPP plasma membrane polypeptide family protein. (Os02t0285300-01)
Sequence

MDYWKTKVLPKIKVVFAKGGNAKKAAAAELIKSFDESKEGINGEFEEKKADLQPKVVEIY
EAAPAPLKVLIKDRAKVSGIKKNSAAVTKFVDDLAKIEFPGAKQLSEGIAKVGPALLSGP
VFATFEKVSTLLPADEEEIKPKEATAAAAEEEKKEEAAAAAAATDAAGEEKKEEAEEKKE
EEAAAPADEPAAAAGESAPAAAEAEPPVEAAATPAAAEAAPAKAEEEEAPKA

Transcript Sequence

Transcript ID

Os02t0285300-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:10715073:10716741:-1 gene:Os02g0285300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:developmentally regulated plasma membrane polypeptide 2 description:DREPP plasma membrane polypeptide family protein. (Os02t0285300-01)
Sequence

AGCGTCCACTTCACGTTCCATCATCTCCTCTACCTCCAACCACATCGTTGCTTAGCCTCG
CCACCGCCGCCGCCGCCGCCGATCAGTGGTAGATCGATCGATCTAGCCGGCCATGGATTA
CTGGAAGACCAAGGTTCTGCCGAAGATTAAGGTCGTCTTCGCCAAGGGCGGCAACGCCAA
GAAGGCTGCCGCCGCCGAACTCATCAAGTCGTTTGATGAATCTAAGGAGGGGATCAACGG
CGAGTTCGAGGAGAAGAAGGCTGACCTCCAGCCCAAGGTCGTCGAGATCTACGAGGCTGC
TCCTGCGCCGCTCAAGGTTCTGATCAAGGACAGGGCCAAGGTGTCCGGGATCAAGAAGAA
CTCCGCCGCCGTCACCAAGTTCGTCGACGATCTCGCCAAAATCGAGTTCCCCGGAGCGAA
GCAACTGAGCGAGGGGATCGCCAAGGTCGGCCCGGCGCTGCTCTCCGGCCCGGTGTTCGC
CACCTTCGAGAAGGTCTCCACGTTGCTCCCCGCCGACGAGGAGGAGATCAAGCCCAAGGA
GGCTACGGCCGCCGCCGCCGAAGAGGAGAAGAAGGAGGAAGCCGCCGCCGCCGCCGCCGC
CACCGACGCCGCCGGCGAGGAGAAGAAGGAAGAAGCCGAGGAGAAGAAAGAAGAAGAGGC
CGCCGCCCCCGCCGACGAGCCAGCTGCAGCCGCCGGTGAGAGCGCACCTGCCGCCGCCGA
GGCCGAGCCCCCAGTCGAGGCCGCAGCGACGCCGGCGGCCGCTGAGGCGGCGCCGGCGAA
GGCCGAGGAGGAGGAGGCACCAAAGGCCTAACTAGCTATAGCTAGCTAGGGTTCATCGCC
GCCATTATTGATGGACGCCTCAAGCCCTAGCTAGAGAGGGATGATCGATGTCGTCGTTGT
GCCATGTCACCAGTCACCACCACCATTCTTTGCTCTTACACATATGCATGATGATGCAGA
TATTCCATTATTGTTGTTCATTATTTTTCTCTACCATTTCTTCCCCTCTTTATGGTTAGA
CGTGTAAGCCTATAATTTTTGTCTGTACTTAAATTAATTATATGCAGTGTGAGGACATGT