Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0281000-01
CDS Infomation	cds chromosome:IRGSP-1.0:2:10419062:10428014:1 gene:Os02g0281000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Protein phosphatase 23 description:RmlC-like jelly roll fold domain containing protein. (Os02t0281000-01);Similar to predicted protein. (Os02t0281000-02)
Sequence	ATGGGCTGCTCACCTTCTAAGGTGTGTTCATGTCCACATTATAAGGGCAGTTTGTGCTTC TGTGACTGTGGATGCTTTGGACAAACACCTGACTCCCCAAGAGAGTCAAGGGGAAAATCA AACCGGGTTAGGGGAAAGACAGATTCTAGTGCTTCAGATGCTTCTTCTGATGACCTAGAG GAAGATGATGATGGATTGCACCAAATGAACATTACAAGGGACTCTAATGTTGGTATCAAT CGACTCTCAAGGGTCTCATCACAATTTCTTCCACCAGAAGGTTCACGTAAAGTTCGAATC CCATTGGGGAATTATGACCTGAGATATTCCTACTTGTCTCAAAGAGGCTACTACCCAGAA TCATTGGACAAGCCAAACCAAGACAGTTTTTGTATACATACTCCATTTGGAACAAGCCCT GATGACCATTTCTTTGGTGTATTTGATGGCCATGGAGAATATGGAGCTCAGTGCTCACAA TTTGTAAAGCGAAGACTATGCGAAAACCTGCTCAGAGATGACCGGTTCCGTACTGATGTT GTTCAGGCTCTTCATTCTGCTTTCTTGGCAACAAATTCACAGCTTCATGCAGACAGCTTA GATGATTCTATGAGTGGTACTACTGCAGTCACTGTGCTGGTGAGGGGTAAAACTATTTAC ATTGCGAATACGGGTGATTCACGTGCTGTTATTGCCGAAAAAAGAGGGGAAGATGTTGTT GCTGTTGACCTGTCCATAGATCAAACACCCTACAGGACTGATGAGCTTGAAAGGGTCAAG GAGTGTGGTGCTAGGGTTATGACGTTGGATCAGATAGAGGGGCTAAAGAACCCAGATGTA CAGTGTTGGGGCACCGAGGAAAGTGATGACGGTGATCCTCCAAGGTTGTGGGTGCAAAAT GGCATGTATCCAGGAACTGCTTTTACTCGCAGCATTGGAGATTCTGTCGCTGAATCTATC GGTGTTGTCGCTAATCCTGAGATTTTTATCCTGGAGCTCAATGCCAACCATCCATTCTTT GTTCTTGCTAGTGATGGAGTTTTTGAGTTTCTTTCTAGTCAAACTGTTGTCGACATGATT GCTAAATACAAGGATCCTCGTGATGCGTGCGCTGCAATTGTTGCTGAATCCTATCGCCTC TGGCTACAGTATGAAACTCGTACAGATGACATTACAATAATAGTTGTTCATATTAACGGG TTAACTGATATGGAATGTACTCAAACTGTAATGAAAGTATCTTTACAACCTTCCCAACAA GTCGTAGAATTGGTAGGCTCAGAATCACCATCGACAATAAGTTTGAATCCCAAGAACCAG CGTTCCAGGCAAGATCTATCACGTGCTCGGCTGAGAGCACTTGAAAGTTCCCTGGAAAAT GGTCGACTATGGGTCCCTCCATCCCCATCGCATCGGAAGACATGGGAAGAGCAAGCACAT ATTGAGCGAATACTACACGACCATTTCCTCTTCAGGAAGCTCACTGACTCACAGTGCCAT GTTTTACTTGATTGCATGCAAAGAGTTGAGGTGAAAGCTGGGGATATAGTGGTGCAGCAG GGCGGTGAAGGCGAGTGCTTCTATGTAGTTGGGAGTGGTGAGTTTGAAGTGCTAGCCATT CAGGAAGAAGATGGAAAGGAAGTTACAAAGGTTCTACATCGGTATACTGCTGACAAACTA TCTTCTTTTGGGGAGCTAGCACTAATGTATAATAAACCACTTCAAGCTTCAGTCCGTGCT GTGACTACTGGAACTTTATGGGCTCTAAAGCGAGAGGATTTTCGGGGAATTCTGATGTCA GAGTTTTCAAATATACCATCATTAAAGTTGCTCCGATCAGTGGAGCTGTTTACGAGATTG ACAATGCTTCAACTAAGTCAACTTGCTGATTCTCTTGTTGAAGTAACTTTTGGGGATGGT CAAATGATAGTAGACAAGAATGATGATGCATCTTCCTTGTATATTATTCAAAGAGGTCGT GTGAAACTTAAATTGGCTGCAGATCAGGTAAATTCAGATGCCTGGGATCTTCTTAGTTCT CAAACAAAGGTGGCCCAATCAAGTCGAGAAGATGGTAATTACGTGTTTGAGATAGATGAA GGGGGACACTTTGGAGAGTGGGCTCTCTTTGGGGAGACAATTGCTTTTACTGCTATGTCA GTTGGTGATGTGACTTGTTCTACTATTGCAAAGGAGAAGTTTGACTCAATTATTGGGCCC TTGCCAAAAGTTTCCCAGTCTGATTCCAAGCTCAAAGATTCCTTGGTTCCTAAAGGGCAT GGTGCAGATGATAGTTCCTTCAGGAAGGCGCAGCTATCTGATTTGGAATGGAAAATGTGC ATATATGCCGCTGATTGCAGTGAGATTGGTCTTGTCCAACTAAGAGGTTCTGACAAGATC AAAAGCTTAAAGAGGTTTTACATCAAGAGAGTAAAAGACCTTCATAAGGAAAAACACGTA TTTGATGAGAAGGATCTCATGAAATCTTTGAGCCAATCAACTTGTGTGCCAGAAGTTCTA TGTACTTGCGCTGATCAATCCTACCTAGGAATACTGCTGAATTGTTGCCTTTGTTGCTCA CTGGCTTCAATACTTCATGCACCACTAAATGAGTCGTCTGCACGATTCTATGCAGCCTCT GTCGTCGTAGCGCTAGAAAATCTCCATCAGAGGTCCATTCTTTACAGAGGTGTTTCTGCA GACATTCTTATGGTCGACCGATCAGGGCATCTTCAACTAGTTGACTTCAGGTTTGCAAAG AAGTTGCAAGGTGAAAGGACTTACACAATATGTGGGATTGCCGACTCTCTAGCTCCAGAG ATAGTTCTTGGTAGGGGCCATGGATTTTCTGCTGACTGGTGGGCGCTGGGAGTGTTGATT TATTTCATGCTGCAATCAGACATGCCATTTGGCTCTTGGAGGGAGAGTGAACTGGAACCT TTTGCAAAGATTGCCAAGGGTCACCTTGTCATGCCATCAACATTCAGCATCGAAGTTGTT GACCTTATTACAAAGCTACTCGAGGTAAACGAAAATGCGCGCCTTGGGGCCAAGGGAGCG GAATCTGTGAAAAGACACCCCTGGTTTGATGGCATTGACTGGAAACAAATAGCAGATGGT ACTTATACAGTACCCCAAGAAATCACCGATCGTGTCGACAGCTATGTAGAAACTCTTACA GAGGACTTGACAGCATCCCCTTCCATGCCAAGTGAAGAAACAGCTGATCAGGCTGCTCCA GAATGGATCCAGGATTGGTGA

Peptide Sequence

PEP ID	Os02t0281000-01
PEP Infomation	pep chromosome:IRGSP-1.0:2:10419062:10428014:1 gene:Os02g0281000 transcript:Os02t0281000-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Protein phosphatase 23 description:RmlC-like jelly roll fold domain containing protein. (Os02t0281000-01);Similar to predicted protein. (Os02t0281000-02)
Sequence	MGCSPSKVCSCPHYKGSLCFCDCGCFGQTPDSPRESRGKSNRVRGKTDSSASDASSDDLE EDDDGLHQMNITRDSNVGINRLSRVSSQFLPPEGSRKVRIPLGNYDLRYSYLSQRGYYPE SLDKPNQDSFCIHTPFGTSPDDHFFGVFDGHGEYGAQCSQFVKRRLCENLLRDDRFRTDV VQALHSAFLATNSQLHADSLDDSMSGTTAVTVLVRGKTIYIANTGDSRAVIAEKRGEDVV AVDLSIDQTPYRTDELERVKECGARVMTLDQIEGLKNPDVQCWGTEESDDGDPPRLWVQN GMYPGTAFTRSIGDSVAESIGVVANPEIFILELNANHPFFVLASDGVFEFLSSQTVVDMI AKYKDPRDACAAIVAESYRLWLQYETRTDDITIIVVHINGLTDMECTQTVMKVSLQPSQQ VVELVGSESPSTISLNPKNQRSRQDLSRARLRALESSLENGRLWVPPSPSHRKTWEEQAH IERILHDHFLFRKLTDSQCHVLLDCMQRVEVKAGDIVVQQGGEGECFYVVGSGEFEVLAI QEEDGKEVTKVLHRYTADKLSSFGELALMYNKPLQASVRAVTTGTLWALKREDFRGILMS EFSNIPSLKLLRSVELFTRLTMLQLSQLADSLVEVTFGDGQMIVDKNDDASSLYIIQRGR VKLKLAADQVNSDAWDLLSSQTKVAQSSREDGNYVFEIDEGGHFGEWALFGETIAFTAMS VGDVTCSTIAKEKFDSIIGPLPKVSQSDSKLKDSLVPKGHGADDSSFRKAQLSDLEWKMC IYAADCSEIGLVQLRGSDKIKSLKRFYIKRVKDLHKEKHVFDEKDLMKSLSQSTCVPEVL CTCADQSYLGILLNCCLCCSLASILHAPLNESSARFYAASVVVALENLHQRSILYRGVSA DILMVDRSGHLQLVDFRFAKKLQGERTYTICGIADSLAPEIVLGRGHGFSADWWALGVLI YFMLQSDMPFGSWRESELEPFAKIAKGHLVMPSTFSIEVVDLITKLLEVNENARLGAKGA ESVKRHPWFDGIDWKQIADGTYTVPQEITDRVDSYVETLTEDLTASPSMPSEETADQAAP EWIQDW

Transcript Sequence

Transcript ID	Os02t0281000-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:10419062:10428014:1 gene:Os02g0281000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Protein phosphatase 23 description:RmlC-like jelly roll fold domain containing protein. (Os02t0281000-01);Similar to predicted protein. (Os02t0281000-02)
Sequence	GGATTCCCACCACCTCCTCTCCTCTCCTCTCCTCTCCTTCTTCCTCTTCCCCTGCACTGC ACTGCCACTGCATTAATCCCCTTCACCGATTCCTCCTCTCCTCTCCTCCACCTCCACCTC CACCGCACGCACCAAACCGCAGTTTCTCTCTCTCTCCCTTTCGCTGTTCCTGTGTGCCTT GCTTAGCTGCCGCTTTCCTCTCTCCCTCCCTCTCTTTCTTTCTTCCTCTCTCTGCTCAAC CTCACAAAAATTCCCCCCTTTTGCTCTTTCTCTTTCTTTCCTCCCCGATCGACTTCTTCT TCTTCTTCACCTTCTCCAGTTCTCCTCATCCGTCTTCGGCGATCTTTGCCGCTGTGAACA TTTGACAGTTTACAGGTTCCTCCATTTCAGTTGTTGGATTAAGAAAGAGGCTTTATGCTT TATAAATAAGTAAGCATCATCATCAATATAAGTTGTGGCTGCTCTTAAAGATCCTCAGAT TCTGTACAAGTTCAGAGCTTCCTCTGTTTGGCAGTGTCAGTACACGTGCTTGCATAGTTC ATAACTGGGGTGGAGATATCTTAGTTTCATGTTCTTTGTGCTTCTTGGCTCTTACCCAGC TGGTTTAACATCTGATGGGCTGCTCACCTTCTAAGGTGTGTTCATGTCCACATTATAAGG GCAGTTTGTGCTTCTGTGACTGTGGATGCTTTGGACAAACACCTGACTCCCCAAGAGAGT CAAGGGGAAAATCAAACCGGGTTAGGGGAAAGACAGATTCTAGTGCTTCAGATGCTTCTT CTGATGACCTAGAGGAAGATGATGATGGATTGCACCAAATGAACATTACAAGGGACTCTA ATGTTGGTATCAATCGACTCTCAAGGGTCTCATCACAATTTCTTCCACCAGAAGGTTCAC GTAAAGTTCGAATCCCATTGGGGAATTATGACCTGAGATATTCCTACTTGTCTCAAAGAG GCTACTACCCAGAATCATTGGACAAGCCAAACCAAGACAGTTTTTGTATACATACTCCAT TTGGAACAAGCCCTGATGACCATTTCTTTGGTGTATTTGATGGCCATGGAGAATATGGAG CTCAGTGCTCACAATTTGTAAAGCGAAGACTATGCGAAAACCTGCTCAGAGATGACCGGT TCCGTACTGATGTTGTTCAGGCTCTTCATTCTGCTTTCTTGGCAACAAATTCACAGCTTC ATGCAGACAGCTTAGATGATTCTATGAGTGGTACTACTGCAGTCACTGTGCTGGTGAGGG GTAAAACTATTTACATTGCGAATACGGGTGATTCACGTGCTGTTATTGCCGAAAAAAGAG GGGAAGATGTTGTTGCTGTTGACCTGTCCATAGATCAAACACCCTACAGGACTGATGAGC TTGAAAGGGTCAAGGAGTGTGGTGCTAGGGTTATGACGTTGGATCAGATAGAGGGGCTAA AGAACCCAGATGTACAGTGTTGGGGCACCGAGGAAAGTGATGACGGTGATCCTCCAAGGT TGTGGGTGCAAAATGGCATGTATCCAGGAACTGCTTTTACTCGCAGCATTGGAGATTCTG TCGCTGAATCTATCGGTGTTGTCGCTAATCCTGAGATTTTTATCCTGGAGCTCAATGCCA ACCATCCATTCTTTGTTCTTGCTAGTGATGGAGTTTTTGAGTTTCTTTCTAGTCAAACTG TTGTCGACATGATTGCTAAATACAAGGATCCTCGTGATGCGTGCGCTGCAATTGTTGCTG AATCCTATCGCCTCTGGCTACAGTATGAAACTCGTACAGATGACATTACAATAATAGTTG TTCATATTAACGGGTTAACTGATATGGAATGTACTCAAACTGTAATGAAAGTATCTTTAC AACCTTCCCAACAAGTCGTAGAATTGGTAGGCTCAGAATCACCATCGACAATAAGTTTGA ATCCCAAGAACCAGCGTTCCAGGCAAGATCTATCACGTGCTCGGCTGAGAGCACTTGAAA GTTCCCTGGAAAATGGTCGACTATGGGTCCCTCCATCCCCATCGCATCGGAAGACATGGG AAGAGCAAGCACATATTGAGCGAATACTACACGACCATTTCCTCTTCAGGAAGCTCACTG ACTCACAGTGCCATGTTTTACTTGATTGCATGCAAAGAGTTGAGGTGAAAGCTGGGGATA TAGTGGTGCAGCAGGGCGGTGAAGGCGAGTGCTTCTATGTAGTTGGGAGTGGTGAGTTTG AAGTGCTAGCCATTCAGGAAGAAGATGGAAAGGAAGTTACAAAGGTTCTACATCGGTATA CTGCTGACAAACTATCTTCTTTTGGGGAGCTAGCACTAATGTATAATAAACCACTTCAAG CTTCAGTCCGTGCTGTGACTACTGGAACTTTATGGGCTCTAAAGCGAGAGGATTTTCGGG GAATTCTGATGTCAGAGTTTTCAAATATACCATCATTAAAGTTGCTCCGATCAGTGGAGC TGTTTACGAGATTGACAATGCTTCAACTAAGTCAACTTGCTGATTCTCTTGTTGAAGTAA CTTTTGGGGATGGTCAAATGATAGTAGACAAGAATGATGATGCATCTTCCTTGTATATTA TTCAAAGAGGTCGTGTGAAACTTAAATTGGCTGCAGATCAGGTAAATTCAGATGCCTGGG ATCTTCTTAGTTCTCAAACAAAGGTGGCCCAATCAAGTCGAGAAGATGGTAATTACGTGT TTGAGATAGATGAAGGGGGACACTTTGGAGAGTGGGCTCTCTTTGGGGAGACAATTGCTT TTACTGCTATGTCAGTTGGTGATGTGACTTGTTCTACTATTGCAAAGGAGAAGTTTGACT CAATTATTGGGCCCTTGCCAAAAGTTTCCCAGTCTGATTCCAAGCTCAAAGATTCCTTGG TTCCTAAAGGGCATGGTGCAGATGATAGTTCCTTCAGGAAGGCGCAGCTATCTGATTTGG AATGGAAAATGTGCATATATGCCGCTGATTGCAGTGAGATTGGTCTTGTCCAACTAAGAG GTTCTGACAAGATCAAAAGCTTAAAGAGGTTTTACATCAAGAGAGTAAAAGACCTTCATA AGGAAAAACACGTATTTGATGAGAAGGATCTCATGAAATCTTTGAGCCAATCAACTTGTG TGCCAGAAGTTCTATGTACTTGCGCTGATCAATCCTACCTAGGAATACTGCTGAATTGTT GCCTTTGTTGCTCACTGGCTTCAATACTTCATGCACCACTAAATGAGTCGTCTGCACGAT TCTATGCAGCCTCTGTCGTCGTAGCGCTAGAAAATCTCCATCAGAGGTCCATTCTTTACA GAGGTGTTTCTGCAGACATTCTTATGGTCGACCGATCAGGGCATCTTCAACTAGTTGACT TCAGGTTTGCAAAGAAGTTGCAAGGTGAAAGGACTTACACAATATGTGGGATTGCCGACT CTCTAGCTCCAGAGATAGTTCTTGGTAGGGGCCATGGATTTTCTGCTGACTGGTGGGCGC TGGGAGTGTTGATTTATTTCATGCTGCAATCAGACATGCCATTTGGCTCTTGGAGGGAGA GTGAACTGGAACCTTTTGCAAAGATTGCCAAGGGTCACCTTGTCATGCCATCAACATTCA GCATCGAAGTTGTTGACCTTATTACAAAGCTACTCGAGGTAAACGAAAATGCGCGCCTTG GGGCCAAGGGAGCGGAATCTGTGAAAAGACACCCCTGGTTTGATGGCATTGACTGGAAAC AAATAGCAGATGGTACTTATACAGTACCCCAAGAAATCACCGATCGTGTCGACAGCTATG TAGAAACTCTTACAGAGGACTTGACAGCATCCCCTTCCATGCCAAGTGAAGAAACAGCTG ATCAGGCTGCTCCAGAATGGATCCAGGATTGGTGATCTCAGTTGCTGCATGAACAAAAAG ATGTTTGGGAAAACTTGTTTAGCATTTCAAATGAAAAAAAAAACGGGTACATACATGATT ACAGCATGTGAATTTTTGTCGAAATGGTGGATTATACGTAGCAACAATTCTGTATAGAGG AATCATCAGCTCAACCTGCAACCATCTGATGGATATGCTAGCAAAAATGTGAAAAATGGT GTTGCAGTAGTTCAAGCAGGAGCCAGAACTGGTCTGCAGGGAGAACTAATGATTCCTGTG GTACATATGTATAGACCCTTCTTTCATTTGTAAATTTATTTGTATTATTCATCTGTAGGT GAAAATTATAACTGCCTACCTATGTAATTTTGTATAACATTTTGAT