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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0280200-00
CDS Infomation

cds chromosome:IRGSP-1.0:2:10359560:10360971:1 gene:Os02g0280200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:XYLOGLUCAN ENDOTRANSGLUCOSYDASE/HYDROLASE 13 description:Similar to Xyloglucan endotransglucosylase/hydrolase protein 26. (Os02t0280200-00)
Sequence

ATGGCGGCGAAGCTGCAGGGAGGAGGAGGAGGAGCGGCGGTGATGGCGGTGGTGGTGGTG
GCGATGGTCGCCGGCGCGGCGTCCGGCGGCAACTTCTACGAGGAGTGCGACGCGACGTGG
GAGCCGCAGAACTGCTGGTCGTCGGACAACGGCAAGAGCCTGTCGCTGGCGCTGGTCAGC
AACTCCTCCGGCTCCATGATCCGCTCCAAGCGGCAGTTCGTCTACGGCTCCGTCTCCACC
TCCGTCCAGCTCGTCCCCGGCAACTCCGCCGGCACCGTCACCACCTTCTACACGTCGTCG
CTGGGTGACAAGCACGACGAGATCGACTTCGAGTTCCTGGGCAACGAGACCGGACAACCC
TACACCATCCACACCAACGTCTACGCCAACGGCGTCGGCGACAAGGAGATGCAGTTCAAG
CCGTGGTTCGACCCCACCGACGGCTCCCACAACTACACCATCTCCTGGACCCCCTGCAGG
ATCATATTGACTTGCCAAAGGGGGGGGTCCGAAATTACCGAAATTTCAATCACTGCCTAT
ATTGTGAAACTGGTCGGTACAAGCAACTTAATAACGGTAACAATTAATGCAGGTGGTACA
TCGATGGGATGCCCATCAGGGTGTTCCGCAACTACCAGAGCAGCAACGGCGTGGCGTTCC
CGACGTGGCAGCCGATGTACGCCTACTCGAGCATATGGGCGGCGGAGGACTGGGCCACGC
AGAAGGGGAGGGTCAAGACGGACTGGAGCAAGGCGCCGTTCGTCGCCAACTACCACGGCA
TCGACCTCGACGTCTGCGAGTGCTACGGCGGCGACTGCGTGTACGGCTGCGCCGCCGCGT
TCAACCAGGGCGGCGGCTGCGCCGGCCAGCAGCTCACCGGCGACGAGATGGGGCAGATGA

Peptide Sequence

PEP ID

Os02t0280200-00
PEP Infomation

pep chromosome:IRGSP-1.0:2:10359560:10360971:1 gene:Os02g0280200 transcript:Os02t0280200-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:XYLOGLUCAN ENDOTRANSGLUCOSYDASE/HYDROLASE 13 description:Similar to Xyloglucan endotransglucosylase/hydrolase protein 26. (Os02t0280200-00)
Sequence

MAAKLQGGGGGAAVMAVVVVAMVAGAASGGNFYEECDATWEPQNCWSSDNGKSLSLALVS
NSSGSMIRSKRQFVYGSVSTSVQLVPGNSAGTVTTFYTSSLGDKHDEIDFEFLGNETGQP
YTIHTNVYANGVGDKEMQFKPWFDPTDGSHNYTISWTPCRIILTCQRGGSEITEISITAY
IVKLVGTSNLITVTINAGGTSMGCPSGCSATTRAATAWRSRRGSRCTPTRAYGRRRTGPR
RRGGSRRTGARRRSSPTTTASTSTSASATAATACTAAPPRSTRAAAAPASSSPATRWGR

Transcript Sequence

Transcript ID

Os02t0280200-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:10359560:10360971:1 gene:Os02g0280200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:XYLOGLUCAN ENDOTRANSGLUCOSYDASE/HYDROLASE 13 description:Similar to Xyloglucan endotransglucosylase/hydrolase protein 26. (Os02t0280200-00)
Sequence

ATGGCGGCGAAGCTGCAGGGAGGAGGAGGAGGAGCGGCGGTGATGGCGGTGGTGGTGGTG
GCGATGGTCGCCGGCGCGGCGTCCGGCGGCAACTTCTACGAGGAGTGCGACGCGACGTGG
GAGCCGCAGAACTGCTGGTCGTCGGACAACGGCAAGAGCCTGTCGCTGGCGCTGGTCAGC
AACTCCTCCGGCTCCATGATCCGCTCCAAGCGGCAGTTCGTCTACGGCTCCGTCTCCACC
TCCGTCCAGCTCGTCCCCGGCAACTCCGCCGGCACCGTCACCACCTTCTACACGTCGTCG
CTGGGTGACAAGCACGACGAGATCGACTTCGAGTTCCTGGGCAACGAGACCGGACAACCC
TACACCATCCACACCAACGTCTACGCCAACGGCGTCGGCGACAAGGAGATGCAGTTCAAG
CCGTGGTTCGACCCCACCGACGGCTCCCACAACTACACCATCTCCTGGACCCCCTGCAGG
ATCATATTGACTTGCCAAAGGGGGGGGTCCGAAATTACCGAAATTTCAATCACTGCCTAT
ATTGTGAAACTGGTCGGTACAAGCAACTTAATAACGGTAACAATTAATGCAGGTGGTACA
TCGATGGGATGCCCATCAGGGTGTTCCGCAACTACCAGAGCAGCAACGGCGTGGCGTTCC
CGACGTGGCAGCCGATGTACGCCTACTCGAGCATATGGGCGGCGGAGGACTGGGCCACGC
AGAAGGGGAGGGTCAAGACGGACTGGAGCAAGGCGCCGTTCGTCGCCAACTACCACGGCA
TCGACCTCGACGTCTGCGAGTGCTACGGCGGCGACTGCGTGTACGGCTGCGCCGCCGCGT
TCAACCAGGGCGGCGGCTGCGCCGGCCAGCAGCTCACCGGCGACGAGATGGGGCAGATGA