Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0276500-01
CDS Infomation	cds chromosome:IRGSP-1.0:2:10155843:10164739:-1 gene:Os02g0276500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:tocopherol cyclase, VITAMIN E DEFICIENT 1 description:Similar to Tocopherol cyclase. (Os02t0276500-01)
Sequence	ATGGACCTCGCCGCCGCCGCCGTGGCCGTCTCCTTCCCACGCCCTGCTCCCCCGCCGCGC CGCTGCGCCCCACGCCGCCACCGCCGCGCCCTCGCTCCGCGCGCGGCCTCCTCCTCCCCC TCCCCCTCCACGGCGGTGGCGGCGCCCGTCTACGCCCCCACGCCGCGGGACCGGGCCCTG CGGACGCCGCACAGCGGGTATCACTATGACGGCACGGCGAGGCCCTTCTTTGAGGGATGG TACTTCAAGGTGTCCATTCCCGAGTGCAGGCAGAGCTTCTGCTTCATGTACTCTGTCGAG AACCCGTTGTTCCGAGATGGGATGAGTGATCTGGATCGGGTCATACATGGTTCGCGCTTC ACTGGCGTCGGGGCGCAGATTCTTGGCGCCGATGATAAGTACATATGCCAGTTCACCGAG AAATCCAATAACTTTTGGGGAAGTAGGCATGAACTAATGCTCGGAAACACTTTCATTCCC AATAATGGTTCAACACCCCCAGAAGGGGAGGTTCCCCCTCAGGAATTTTCTAGTCGAGTT TTGGAAGGCTTCCAAGTGACACCGATTTGGCATCAAGGCTTTATACGTGATGATGGAAGG TCAAAGTATGTGCCAAATGTCCAAACAGCTAGGTGGGAGTACAGCACTCGACCAGTATAT GGCTGGGGTGATGTCACGTCAAAGCAGAAATCAACTGCTGGTTGGCTTGCTGCTTTTCCT TTCTTTGAACCTCATTGGCAAATATGCATGGCTGGTGGCTTATCCACAGGATGGATTGAA TGGGACGGAGAGCGGTTTGAATTTGAAAATGCTCCTTCTTATTCAGAAAAGAACTGGGGT GCAGGTTTTCCGAGGAAGTGGTATTGGGTCCAGTGCAATGTCTTCTCAGGCGCATCTGGT GAAGTTGCATTAACGGCTGCTGGCGGATTAAGGAAAATTGGATTGGGCGAAACCTATGAA AGTCCTTCACTGATTGGAATTCATTATGAGGGAAAATTCTATGAATTTGTGCCTTGGACC GGGACAGTGAGCTGGGACATTGCCCCTTGGGGTCACTGGAAGTTGTCCGGCGAGAACAAA AATCATCTGGTTGAAATAGAAGCAACCACAAAAGAACCAGGCACTGCTTTGCGAGCTCCA ACCATGGAGGCTGGACTAGTGCCAGCATGCAAAGACACCTGCTATGGTGATCTGAGGCTG CAAATGTGGGAAAAGAGAAATGATGGTGGCAAGGGAAAGATGATACTCGACGCAACAAGC AACATGGCGGCACTAGAAGTTGGTGGAGGCCCTTGGTTCAATGGTTGGAAAGGCACGACT GTTTCAAACGAGATTGTGAACAACGTTGTTGGTACCCAGGTCGATGTGGAGAGCCTCTTC CCTATCCCATTTCTCAAGCCCCCTGGTCTGTAG

Peptide Sequence

PEP ID	Os02t0276500-01
PEP Infomation	pep chromosome:IRGSP-1.0:2:10155843:10164739:-1 gene:Os02g0276500 transcript:Os02t0276500-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:tocopherol cyclase, VITAMIN E DEFICIENT 1 description:Similar to Tocopherol cyclase. (Os02t0276500-01)
Sequence	MDLAAAAVAVSFPRPAPPPRRCAPRRHRRALAPRAASSSPSPSTAVAAPVYAPTPRDRAL RTPHSGYHYDGTARPFFEGWYFKVSIPECRQSFCFMYSVENPLFRDGMSDLDRVIHGSRF TGVGAQILGADDKYICQFTEKSNNFWGSRHELMLGNTFIPNNGSTPPEGEVPPQEFSSRV LEGFQVTPIWHQGFIRDDGRSKYVPNVQTARWEYSTRPVYGWGDVTSKQKSTAGWLAAFP FFEPHWQICMAGGLSTGWIEWDGERFEFENAPSYSEKNWGAGFPRKWYWVQCNVFSGASG EVALTAAGGLRKIGLGETYESPSLIGIHYEGKFYEFVPWTGTVSWDIAPWGHWKLSGENK NHLVEIEATTKEPGTALRAPTMEAGLVPACKDTCYGDLRLQMWEKRNDGGKGKMILDATS NMAALEVGGGPWFNGWKGTTVSNEIVNNVVGTQVDVESLFPIPFLKPPGL

Transcript Sequence

Transcript ID	Os02t0276500-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:10155843:10164739:-1 gene:Os02g0276500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:tocopherol cyclase, VITAMIN E DEFICIENT 1 description:Similar to Tocopherol cyclase. (Os02t0276500-01)
Sequence	CAGCTGCTGCCCGCCCGCAGCATCAGCATGGACCTCGCCGCCGCCGCCGTGGCCGTCTCC TTCCCACGCCCTGCTCCCCCGCCGCGCCGCTGCGCCCCACGCCGCCACCGCCGCGCCCTC GCTCCGCGCGCGGCCTCCTCCTCCCCCTCCCCCTCCACGGCGGTGGCGGCGCCCGTCTAC GCCCCCACGCCGCGGGACCGGGCCCTGCGGACGCCGCACAGCGGGTATCACTATGACGGC ACGGCGAGGCCCTTCTTTGAGGGATGGTACTTCAAGGTGTCCATTCCCGAGTGCAGGCAG AGCTTCTGCTTCATGTACTCTGTCGAGAACCCGTTGTTCCGAGATGGGATGAGTGATCTG GATCGGGTCATACATGGTTCGCGCTTCACTGGCGTCGGGGCGCAGATTCTTGGCGCCGAT GATAAGTACATATGCCAGTTCACCGAGAAATCCAATAACTTTTGGGGAAGTAGGCATGAA CTAATGCTCGGAAACACTTTCATTCCCAATAATGGTTCAACACCCCCAGAAGGGGAGGTT CCCCCTCAGGAATTTTCTAGTCGAGTTTTGGAAGGCTTCCAAGTGACACCGATTTGGCAT CAAGGCTTTATACGTGATGATGGAAGGTCAAAGTATGTGCCAAATGTCCAAACAGCTAGG TGGGAGTACAGCACTCGACCAGTATATGGCTGGGGTGATGTCACGTCAAAGCAGAAATCA ACTGCTGGTTGGCTTGCTGCTTTTCCTTTCTTTGAACCTCATTGGCAAATATGCATGGCT GGTGGCTTATCCACAGGATGGATTGAATGGGACGGAGAGCGGTTTGAATTTGAAAATGCT CCTTCTTATTCAGAAAAGAACTGGGGTGCAGGTTTTCCGAGGAAGTGGTATTGGGTCCAG TGCAATGTCTTCTCAGGCGCATCTGGTGAAGTTGCATTAACGGCTGCTGGCGGATTAAGG AAAATTGGATTGGGCGAAACCTATGAAAGTCCTTCACTGATTGGAATTCATTATGAGGGA AAATTCTATGAATTTGTGCCTTGGACCGGGACAGTGAGCTGGGACATTGCCCCTTGGGGT CACTGGAAGTTGTCCGGCGAGAACAAAAATCATCTGGTTGAAATAGAAGCAACCACAAAA GAACCAGGCACTGCTTTGCGAGCTCCAACCATGGAGGCTGGACTAGTGCCAGCATGCAAA GACACCTGCTATGGTGATCTGAGGCTGCAAATGTGGGAAAAGAGAAATGATGGTGGCAAG GGAAAGATGATACTCGACGCAACAAGCAACATGGCGGCACTAGAAGTTGGTGGAGGCCCT TGGTTCAATGGTTGGAAAGGCACGACTGTTTCAAACGAGATTGTGAACAACGTTGTTGGT ACCCAGGTCGATGTGGAGAGCCTCTTCCCTATCCCATTTCTCAAGCCCCCTGGTCTGTAG CATTGTTCAGGTCGAGCCATCGATAGGTAGAGATGAATAGGCCCTCCAATCTTGTCACAC CTTGAGTCTTGATCTGTTCCTCACTTAGCATCATGTTTTCAGCCAGAGAACTACAGAAAC AGTAAACCAATCAGCATGGAGTTTATTCTCGTTGGGTTAGAGAAAGGCGCCTTTCGGGTG AAATCATGTTGCACAAATTTTTACAGATCAGGAATGGATGCTGTAATTCAAGAAAATAAG TATAATTCATCTTAGGCAGTTCCATCCTTTTGTGCTCATCTGAACTTCTGAAGTATCATA AAGAAGTGATAGCTGGATGCCCGGGCCTGCATCTGCAATTGTGGAGGTCTTTCTGGTCAG AATTGGCTGGAAACAATTGTTGTTAGCACACTTCATATGGTAAATCTTTCAGAGGTACTG ACAGACAAAGACGTGTGTTTTCAATTATCATTGTACTAACAAGGATACCAGTGGGCCTAA CAGCACATGACGGAAGTTCTAGCCTGTTGGCATAACATTGGATTATAGTATTACAAAGCT GATTTTAAATTTT