Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0275200-02
CDS Infomation	cds chromosome:IRGSP-1.0:2:10088213:10089824:-1 gene:Os02g0275200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Xyloglucan fucosyltransferase family protein. (Os02t0275200-01);Hypothetical conserved gene. (Os02t0275200-02)
Sequence	AAGCCTTCCCCCTACCTCGTCGCCAAGCTCCGCAGCCACGAAGCGCTCCAGAAGCGCTGC GGCCCCGGCACGGCGCCGTACGACAAGGCGCTCCGGCAGCTCAAGTCCGGCGATGGCGCC GCCGCCGCTGATGGCGACGACGACTGCCGCTACCTCGTCTCCATCAGCTACAACCGCGGG CTAGGCAACCGCATCATCGCCATCGTCTCCGCCTTCCTCTACGCCGTCCTCACCGAGCGC GCGCTCCTCGTCGCGCCGTACAACGGCGACGTCGCCGCCCTCTTCTGCGAGCCCTTCCCG GGGACGACGTGGCTGCTCCCCGACGGCGGTCGGCGGTTCCCGCTCCTGCACCTCCGGGAC CTCGACGGTAAGTCCAAGGAGAGCCTGGGAGCCTTGCTGAAGAGCAACGGCATCGTCTCC GTCGCCGCCGGCGTGAACGGCAGCACGTCGTCGTCGTGGTCGGGCCGGCCGCCGCCGCCG TACGTGTACCTCCACCTCGACGGCGGCGCCGACTACCACGACAAGCTGTTCTACTGCGAC GAGCAGCAGCGCCTCCTCCGCGGCGTGCCGTGGCTGCTGATGAAGACGGACAGCTACCTC GTCCCGGGGCTCTTCCTCGTGCCGTCGCTCCGTGGCGAGCTCGAGCGGATGTTCCCGGAG AAGGACGCCGTGTTCCACCACCTCAGCCGCTACCTCCTCCACCCGGCCAACGCCGTCTGG CACGCCATCACGGCCTACCACCGCGACCACCTCGCCGGCGCCGGCCACCTCGTCGGCATA CAGATCCGCGTGTACCACGAGGAGACGCCGCCGGTGTCGCAGGTGGTGCTCGACCAGGTC CTCTCCTGCGCACGCAGGGAGAACCTCCTCCCGGCCGCAGGGAACACGTCGTCGTCGGAC CAGGCCGTGCTCGTGACGTCGCTGAGCTCGTGGTACTACGAGAAGATCCGCGACGAGCTC GGTGGCGGCGGCGGTGGCGTGCACCAGCCGAGCCACGAGGGGTTGCAGCGGATGGGCGAC ACGGCGCACGACATGAGGGCGCTGAGCGAGATGTACCTGCTCAGCACCTGCGACGCGCTG CTCACCACCGGCTTCTCCACCTTCGGCTACGTCGCGCAGGGGCTCGCGGGGTTGCGGCCG TGGATCATGCCGCGGCGGCCGTGGTGGGAGAAGGAGGCGGCCACGGCGGTGCCGGACCCG CCGTGCGCGCGGGTGGCGACGCCGGAGCCGTGCTTCCACTCGCCGTCGTACTACGAGTGC GCGGCGAGGCGGAACTACGACGACATTGGCAAGGTGGTGCCGTACGTGCGGCGCTGCGAG GACGTCAGCTGGGGCATCCAGCTCGTCAATGGAAGCAGCCAGAGCCAGTGGTAG

Peptide Sequence

PEP ID	Os02t0275200-02
PEP Infomation	pep chromosome:IRGSP-1.0:2:10088213:10089824:-1 gene:Os02g0275200 transcript:Os02t0275200-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Xyloglucan fucosyltransferase family protein. (Os02t0275200-01);Hypothetical conserved gene. (Os02t0275200-02)
Sequence	KPSPYLVAKLRSHEALQKRCGPGTAPYDKALRQLKSGDGAAAADGDDDCRYLVSISYNRG LGNRIIAIVSAFLYAVLTERALLVAPYNGDVAALFCEPFPGTTWLLPDGGRRFPLLHLRD LDGKSKESLGALLKSNGIVSVAAGVNGSTSSSWSGRPPPPYVYLHLDGGADYHDKLFYCD EQQRLLRGVPWLLMKTDSYLVPGLFLVPSLRGELERMFPEKDAVFHHLSRYLLHPANAVW HAITAYHRDHLAGAGHLVGIQIRVYHEETPPVSQVVLDQVLSCARRENLLPAAGNTSSSD QAVLVTSLSSWYYEKIRDELGGGGGGVHQPSHEGLQRMGDTAHDMRALSEMYLLSTCDAL LTTGFSTFGYVAQGLAGLRPWIMPRRPWWEKEAATAVPDPPCARVATPEPCFHSPSYYEC AARRNYDDIGKVVPYVRRCEDVSWGIQLVNGSSQSQW

Transcript Sequence

Transcript ID	Os02t0275200-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:10088213:10089824:-1 gene:Os02g0275200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Xyloglucan fucosyltransferase family protein. (Os02t0275200-01);Hypothetical conserved gene. (Os02t0275200-02)
Sequence	ACAAGCCTTCCCCCTACCTCGTCGCCAAGCTCCGCAGCCACGAAGCGCTCCAGAAGCGCT GCGGCCCCGGCACGGCGCCGTACGACAAGGCGCTCCGGCAGCTCAAGTCCGGCGATGGCG CCGCCGCCGCTGATGGCGACGACGACTGCCGCTACCTCGTCTCCATCAGCTACAACCGCG GGCTAGGCAACCGCATCATCGCCATCGTCTCCGCCTTCCTCTACGCCGTCCTCACCGAGC GCGCGCTCCTCGTCGCGCCGTACAACGGCGACGTCGCCGCCCTCTTCTGCGAGCCCTTCC CGGGGACGACGTGGCTGCTCCCCGACGGCGGTCGGCGGTTCCCGCTCCTGCACCTCCGGG ACCTCGACGGTAAGTCCAAGGAGAGCCTGGGAGCCTTGCTGAAGAGCAACGGCATCGTCT CCGTCGCCGCCGGCGTGAACGGCAGCACGTCGTCGTCGTGGTCGGGCCGGCCGCCGCCGC CGTACGTGTACCTCCACCTCGACGGCGGCGCCGACTACCACGACAAGCTGTTCTACTGCG ACGAGCAGCAGCGCCTCCTCCGCGGCGTGCCGTGGCTGCTGATGAAGACGGACAGCTACC TCGTCCCGGGGCTCTTCCTCGTGCCGTCGCTCCGTGGCGAGCTCGAGCGGATGTTCCCGG AGAAGGACGCCGTGTTCCACCACCTCAGCCGCTACCTCCTCCACCCGGCCAACGCCGTCT GGCACGCCATCACGGCCTACCACCGCGACCACCTCGCCGGCGCCGGCCACCTCGTCGGCA TACAGATCCGCGTGTACCACGAGGAGACGCCGCCGGTGTCGCAGGTGGTGCTCGACCAGG TCCTCTCCTGCGCACGCAGGGAGAACCTCCTCCCGGCCGCAGGGAACACGTCGTCGTCGG ACCAGGCCGTGCTCGTGACGTCGCTGAGCTCGTGGTACTACGAGAAGATCCGCGACGAGC TCGGTGGCGGCGGCGGTGGCGTGCACCAGCCGAGCCACGAGGGGTTGCAGCGGATGGGCG ACACGGCGCACGACATGAGGGCGCTGAGCGAGATGTACCTGCTCAGCACCTGCGACGCGC TGCTCACCACCGGCTTCTCCACCTTCGGCTACGTCGCGCAGGGGCTCGCGGGGTTGCGGC CGTGGATCATGCCGCGGCGGCCGTGGTGGGAGAAGGAGGCGGCCACGGCGGTGCCGGACC CGCCGTGCGCGCGGGTGGCGACGCCGGAGCCGTGCTTCCACTCGCCGTCGTACTACGAGT GCGCGGCGAGGCGGAACTACGACGACATTGGCAAGGTGGTGCCGTACGTGCGGCGCTGCG AGGACGTCAGCTGGGGCATCCAGCTCGTCAATGGAAGCAGCCAGAGCCAGTGGTAGTGTA AAACTGTAGATCACTGAATTGTATAGAGTAGAACATGTGTTCAGATGTTCCACAAAAATA CAAAAAGGCGCATGCATTGTACACCACAAATAATCAAATAATCTAGGCAGATGTAATGAT ATAATGGCAAGAAATAATCTTAGAAGTTAGAACACTGTGCCATTATACTTATAGCAATCT ATGACAGGATGTGACATTACGATATTAAATGTTTCATCTTAACCTGGTTGCT