Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0275100-01
CDS Infomation

cds chromosome:IRGSP-1.0:2:10084510:10087894:1 gene:Os02g0275100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CCMH description:Cytochrome C biogenesis protein family protein. (Os02t0275100-01)
Sequence

ATGGCCACTGAAGAGGATGTGAAGCAACGACAAATTATTGAAAGCCGTGCAAGAAATATT
AGCCACAATGTCCGATGCACCGAGTGCGGCAGCCAGTCCATTGAAGATTCACAAGCTGAC
ATTGCAATTCTGCTTAGGAAGCTAATTCGTGATGAAATCAAATCTGGAAAGAGTGATAAG
GAGATATACAAAAAACTACAAGCTGACTATGGAGAAACAATTCTATATACCCCTAAATTT
GATCTTCAAACTGCTGCCATATGGTTATCACCGGTGATCGTGGGTGGCGTAGCAGCTGGT
GTCTGGGCTTACCAAAAGCACAGGCAGAGGACTAACGTTCACATCATGGCTCTGAATCTT
GTCCGGGGGGTTCCACTGACACCAAGGGAGAAGGAGACCATGCTTGACGTACTTACACCA
CCACCTCCTGCCAACAAGTGGTGGTGGCCAGGCAAATGA

Peptide Sequence

PEP ID

Os02t0275100-01
PEP Infomation

pep chromosome:IRGSP-1.0:2:10084510:10087894:1 gene:Os02g0275100 transcript:Os02t0275100-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CCMH description:Cytochrome C biogenesis protein family protein. (Os02t0275100-01)
Sequence

MATEEDVKQRQIIESRARNISHNVRCTECGSQSIEDSQADIAILLRKLIRDEIKSGKSDK
EIYKKLQADYGETILYTPKFDLQTAAIWLSPVIVGGVAAGVWAYQKHRQRTNVHIMALNL
VRGVPLTPREKETMLDVLTPPPPANKWWWPGK

Transcript Sequence

Transcript ID

Os02t0275100-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:10084510:10087894:1 gene:Os02g0275100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CCMH description:Cytochrome C biogenesis protein family protein. (Os02t0275100-01)
Sequence

AGTTGAGGGGTTAGGTTAGGGACGCAGGAAGGCAGGAAAGAGAGGCGCACGCGTCGCGCC
GTCGTCTCCCCGCTCCTGTCGTCCGGCGCCGGCGGCCATCGACGCAGCAGAGGCCGCAGC
CATCGACCGCCCGGGGCCGCCATTCTCCCCGCCCCGCGTCGGGTCCCCTCGGCTCCTCGC
CCTCCCTGCTCTCCTCCTCTCGGCCCTCGCCATCTCCCTCTTCGGCTCTCCGTGACGACC
GAGACCGGCGAGCCCCCCCTGGCTTGGCTGGCTCTCCCCCTTTCAGCCTTTCCAGCTCTC
CTTCTGCCCGGGCAAAGTGCAACGGTTCTTATATACAGCTAATTGGCTATCATACGGAGC
ACATTGTCTTTTGTCATGGCCACTGAAGAGGATGTGAAGCAACGACAAATTATTGAAAGC
CGTGCAAGAAATATTAGCCACAATGTCCGATGCACCGAGTGCGGCAGCCAGTCCATTGAA
GATTCACAAGCTGACATTGCAATTCTGCTTAGGAAGCTAATTCGTGATGAAATCAAATCT
GGAAAGAGTGATAAGGAGATATACAAAAAACTACAAGCTGACTATGGAGAAACAATTCTA
TATACCCCTAAATTTGATCTTCAAACTGCTGCCATATGGTTATCACCGGTGATCGTGGGT
GGCGTAGCAGCTGGTGTCTGGGCTTACCAAAAGCACAGGCAGAGGACTAACGTTCACATC
ATGGCTCTGAATCTTGTCCGGGGGGTTCCACTGACACCAAGGGAGAAGGAGACCATGCTT
GACGTACTTACACCACCACCTCCTGCCAACAAGTGGTGGTGGCCAGGCAAATGATTTTTC
ATGTGCTTAATGAACACGAAGAACTCTCCTGTCCTATTTACTGGTGGCTTCACAAACTTG
ATAAGGAATTCAGGATTGCTAATTTTAGGGCACATTCTTTCTGAATGTCACACTTATCAA
CCTAAGATCGCGTATTTTGTAGTGTTGTATAGGCAGCTTCTGTCAGTATGGTAAACAACA
GTGTGCTACTCAGAACTCTGTACTGCATTCAGCAGTGTTTCTGACTGAACTCTGTTTTGT
CTTTCATCAGAAGCTCATGTCTGCTGATAAGCTGACAATAAGAAAACCCCGTTATGTAAG
AACAAACCCAACTTGTCTGAAAATAATACTCATCCCGTGTAATAAT