Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0273700-01
CDS Infomation	cds chromosome:IRGSP-1.0:2:9972735:9978051:1 gene:Os02g0273700 gene_biotype:protein_coding transcript_biotype:protein_coding description:VHS domain containing protein. (Os02t0273700-01)
Sequence	ATGCCGTCCGTGCTGGTCGACCGCGCGACGAACGACATGCTCATCGGCCCGGACTGGGCC ATGAACCTGGAGATCTGCGACACCCTCAATCGAGACCCAGGGCAAGCAAAAGATGTCGTG AAGTCTATCAAGAAACGAATTGCACACAGGAATGCGAAGGTCCAGCTTCTTGCTCTCACG TTACTGGAGACGATGATCAAAAACTGTGGGGACATTGTCCATATGCAAGTTGCTGAGAAA GACATACTTCATGAAATGGTGAAAATAGTCAAGAAAAGGCCTGATTTTCATGTGAAAGAG AAGATCCTCACTCTGATAGACACTTGGCAAGAAGTTTTTGGCGGGGTACGTGCAAGATAT CCACAATACTACGCAGCATATCAGGAGCTCTTGCGTGCTGGGGCCGTATTTCCTCAAAGA TCAAATGGTTCTGTTCCAATATTTACTCCTCCACAGACTCAACCTCTGCAAAACTATCCT GCATCTTTACGCAGTGCTCAGCAAGAGCCACCTGGATCATCAGTGCCAGATTTGCCTTCA TTGAGCCTAGCAGAAATTCAGAATGCACGAGGCATCATGGATGTTCTTTCCGAGATGTTG AATGCTTTGGATCCTAGTAACAGAGAGGGGCTTAGGCAAGAGGTCATTGTTGACCTGGTG GATCAATGCCGTTCATACAAGCAGAGAGTGGTAGAGCTAGTAAACACTACCTCGAATGAG GAGTTGCTCAGCCAGGGCCTTTCTTTGAATGATGATTTGCAGAGAGTTCTAGCAAAACAT GATGCTATTGCTGCAGGCGTTGCAGTTAGGTTGGAGAAAACAAAATCTCTCCAAACCAAA ATTGATAGTTCTCCACCCGCAAATCCTGGGACTTCAAAAGCACCAGTTCAAAGTTCTTCA GGGACTGCAAGTGCCAGCAACCAATCTACCTTAGCACTTCCTGCTCCAGCATCATCCAGT AGTCCAAAAGCTCCTGCAGCACCAGTACCGGTTATCGACCTTCTTAGTGGAGATGATTAC ATCAAACCTGAACCTGCAAACTCCCTTGCACTTGTTCCTGTCACAGAATATTCAGCAGCT GATCAGAATGTGCTAGCTCTTGCAGACATGTTTGAGCAAAATAATGCCAACAGAAGCAAC AATAACCTTACTAACTCTTTTAATACATCGGCACCAAATTCAAATTTCCCTGCATCACAA GCATATCCTGCTCCAGTGCAACCTGCTCTGCCTCAGCATCCTGTTGCTTATTCAAATGGG GTTTCATCCAATGCCATCGTACCTTACTATGATGATCAAAATGGAGGCCTTCCACCACCA CCATGGGAGATTCAGCAATCCATGGACAACCCACCCCAACCCACCCAACTTGGCCAGATG CCACTGCAACCAGGGCAACCAGTAGGGATGCACCCCCAATCACCACATTCTGGTCAGTTT GGCCAAGGATCATTCATGTCACCACAACAAATGGCAAATGGTCAGCTAGGAGGAACACAG CCGCGACAATCACCACAACCGCAGTCCGCACCGAATCTCCAATACGGAGGGATGATGATG TACCCCAATTCGATGCAAGTCAATCAGGGAGCTGGAATGTACTCCCAACCGATGTTTGGG GGACAGTTCTATGGCATGAGCCATCATCATCAGATGTATGCTGTTCAGATGGCTGGCTAT GGATTTGGCCAGCAACCTGGAGCTTACTACATCCCGAATGCGGCGTATGCTTATGTTAGC GCGAATGAGCTTACCCAGAGGATGAATGCGGTTTCGGTTCAGGAAGGTAATTCACATGGT GGAGCAATGGCATCCAGGCCTGAAGATTCACTCTTTGGTGATCTTGTCAGCATTGCCAAG ATGAAACAGAACAAACCTGCAGCTGGCAAGGTTGGTGGCTTGTAA

Peptide Sequence

PEP ID	Os02t0273700-01
PEP Infomation	pep chromosome:IRGSP-1.0:2:9972735:9978051:1 gene:Os02g0273700 transcript:Os02t0273700-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:VHS domain containing protein. (Os02t0273700-01)
Sequence	MPSVLVDRATNDMLIGPDWAMNLEICDTLNRDPGQAKDVVKSIKKRIAHRNAKVQLLALT LLETMIKNCGDIVHMQVAEKDILHEMVKIVKKRPDFHVKEKILTLIDTWQEVFGGVRARY PQYYAAYQELLRAGAVFPQRSNGSVPIFTPPQTQPLQNYPASLRSAQQEPPGSSVPDLPS LSLAEIQNARGIMDVLSEMLNALDPSNREGLRQEVIVDLVDQCRSYKQRVVELVNTTSNE ELLSQGLSLNDDLQRVLAKHDAIAAGVAVRLEKTKSLQTKIDSSPPANPGTSKAPVQSSS GTASASNQSTLALPAPASSSSPKAPAAPVPVIDLLSGDDYIKPEPANSLALVPVTEYSAA DQNVLALADMFEQNNANRSNNNLTNSFNTSAPNSNFPASQAYPAPVQPALPQHPVAYSNG VSSNAIVPYYDDQNGGLPPPPWEIQQSMDNPPQPTQLGQMPLQPGQPVGMHPQSPHSGQF GQGSFMSPQQMANGQLGGTQPRQSPQPQSAPNLQYGGMMMYPNSMQVNQGAGMYSQPMFG GQFYGMSHHHQMYAVQMAGYGFGQQPGAYYIPNAAYAYVSANELTQRMNAVSVQEGNSHG GAMASRPEDSLFGDLVSIAKMKQNKPAAGKVGGL

Transcript Sequence

Transcript ID	Os02t0273700-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:9972735:9978051:1 gene:Os02g0273700 gene_biotype:protein_coding transcript_biotype:protein_coding description:VHS domain containing protein. (Os02t0273700-01)
Sequence	AGACGAACAGCGCCACGGAATTCATCGAAAAAAAAATTATCGTGCTCGCCGAAAGCCGGC CGCTTTGAGACCATCCAAGAACCGCGAATCCTTCCTCCCTTCGACGACCTTAATTTCCTC TGCCATTTGAGCCCGCCAAAGGCGGCTCCGGTTTCGGATTTTTTGGTAGGAGAGTTGGTT GGTTTCCGGCGAGGGGGGGAGCAGGATGCCGTCCGTGCTGGTCGACCGCGCGACGAACGA CATGCTCATCGGCCCGGACTGGGCCATGAACCTGGAGATCTGCGACACCCTCAATCGAGA CCCAGGGCAAGCAAAAGATGTCGTGAAGTCTATCAAGAAACGAATTGCACACAGGAATGC GAAGGTCCAGCTTCTTGCTCTCACGTTACTGGAGACGATGATCAAAAACTGTGGGGACAT TGTCCATATGCAAGTTGCTGAGAAAGACATACTTCATGAAATGGTGAAAATAGTCAAGAA AAGGCCTGATTTTCATGTGAAAGAGAAGATCCTCACTCTGATAGACACTTGGCAAGAAGT TTTTGGCGGGGTACGTGCAAGATATCCACAATACTACGCAGCATATCAGGAGCTCTTGCG TGCTGGGGCCGTATTTCCTCAAAGATCAAATGGTTCTGTTCCAATATTTACTCCTCCACA GACTCAACCTCTGCAAAACTATCCTGCATCTTTACGCAGTGCTCAGCAAGAGCCACCTGG ATCATCAGTGCCAGATTTGCCTTCATTGAGCCTAGCAGAAATTCAGAATGCACGAGGCAT CATGGATGTTCTTTCCGAGATGTTGAATGCTTTGGATCCTAGTAACAGAGAGGGGCTTAG GCAAGAGGTCATTGTTGACCTGGTGGATCAATGCCGTTCATACAAGCAGAGAGTGGTAGA GCTAGTAAACACTACCTCGAATGAGGAGTTGCTCAGCCAGGGCCTTTCTTTGAATGATGA TTTGCAGAGAGTTCTAGCAAAACATGATGCTATTGCTGCAGGCGTTGCAGTTAGGTTGGA GAAAACAAAATCTCTCCAAACCAAAATTGATAGTTCTCCACCCGCAAATCCTGGGACTTC AAAAGCACCAGTTCAAAGTTCTTCAGGGACTGCAAGTGCCAGCAACCAATCTACCTTAGC ACTTCCTGCTCCAGCATCATCCAGTAGTCCAAAAGCTCCTGCAGCACCAGTACCGGTTAT CGACCTTCTTAGTGGAGATGATTACATCAAACCTGAACCTGCAAACTCCCTTGCACTTGT TCCTGTCACAGAATATTCAGCAGCTGATCAGAATGTGCTAGCTCTTGCAGACATGTTTGA GCAAAATAATGCCAACAGAAGCAACAATAACCTTACTAACTCTTTTAATACATCGGCACC AAATTCAAATTTCCCTGCATCACAAGCATATCCTGCTCCAGTGCAACCTGCTCTGCCTCA GCATCCTGTTGCTTATTCAAATGGGGTTTCATCCAATGCCATCGTACCTTACTATGATGA TCAAAATGGAGGCCTTCCACCACCACCATGGGAGATTCAGCAATCCATGGACAACCCACC CCAACCCACCCAACTTGGCCAGATGCCACTGCAACCAGGGCAACCAGTAGGGATGCACCC CCAATCACCACATTCTGGTCAGTTTGGCCAAGGATCATTCATGTCACCACAACAAATGGC AAATGGTCAGCTAGGAGGAACACAGCCGCGACAATCACCACAACCGCAGTCCGCACCGAA TCTCCAATACGGAGGGATGATGATGTACCCCAATTCGATGCAAGTCAATCAGGGAGCTGG AATGTACTCCCAACCGATGTTTGGGGGACAGTTCTATGGCATGAGCCATCATCATCAGAT GTATGCTGTTCAGATGGCTGGCTATGGATTTGGCCAGCAACCTGGAGCTTACTACATCCC GAATGCGGCGTATGCTTATGTTAGCGCGAATGAGCTTACCCAGAGGATGAATGCGGTTTC GGTTCAGGAAGGTAATTCACATGGTGGAGCAATGGCATCCAGGCCTGAAGATTCACTCTT TGGTGATCTTGTCAGCATTGCCAAGATGAAACAGAACAAACCTGCAGCTGGCAAGGTTGG TGGCTTGTAAGGATGAGTGATTGAGTGACTAGATTCATATTTTCTGGTCATTTGCAGCTG CAAAAACTTTTCCTGGCAGTACATAATTTTTTCTAGTTTTGCAGAAAGATAATACATAAT CCTTATCCTTATTGCCACTTTTTGTGCGACGCAAGAAGGCATACTACCCTATTGATGTAA TTTCAGTTTAGGCAGGATTGTAGGGATATAAATTGGAAAGTAGGTTGAGCCTTGAGATGC TTCTGGTGCCTCATGGCAAGGTTGTTTATGTATAAATTCTGAAGTCATGTCATAATCATA GCAGTTTCATCAATAATATCCTTATGTATAAATGTCTGATAACAGGTTTACAGC