Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0272600-01
CDS Infomation	cds chromosome:IRGSP-1.0:2:9902631:9907870:1 gene:Os02g0272600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Aph-1 family protein. (Os02t0272600-01);Similar to gamma-secretase subunit APH-1B. (Os02t0272600-02)
Sequence	ATGACGGTGGCGGCGGGGTTAGGGTACGCGCTGGTCGCGCTGGGCCCCGCCTTCTCCCTC TTCGCCGGCGTCGTCGCCAGGAAGCCCTTCCTCGTCCTCACCCTTCTCACCAGCACTTTA TTCTGGCTTATAAGTTTGATAATTCTCTCGGGAATATGGAGGGTATTTCTCCCTATAAGA TCAGGAGCTTGGTGGCCGTATGCAATTCTTATCCTTACATCTGTTGCATTTCAAGAAGGC ATTCGTCTTGTCTTTTGGAGGCTTTACAAGAAAATGGAAGAGATGCTGGATTCCTTTGCT GATAGAATATCTAAACCGCGCCTCTGTTTGACAGACAAGATGCTAATATCGTTGGCTGGT GGTTTAGGCCATGGAGTGGCTCATGCCGTCTTTTTCTGCCTCAGCCTTTTAACTCCAGCA TTCGGCAGAGCTACATTTTATGTTGAAAAGTGCTCAAGGATGCCATTTTTCCTTGTGTCA GCCATTATTTCTCTTGGATTCTTGGTCATCCACACATTCTCAATGATTATTGCTTTTAAT GGGTACGACGAGAGAAAGAGAAGTGATCAAGTATTTGTCCCAGTTGTTCATCTGATTGCT TCTGTAATGACACTAATCAATCTTGCACCTGGGGGCTGCGTAATTGGTACACCACTATTA TGCGTCATGGGTGCAGTGACGTTGCAATACTGCTGGCAAATGGTATGGCGGAGATTATCT GAGCAGCAGCATCGGCAGTTTAGCAGCTAG

Peptide Sequence

PEP ID	Os02t0272600-01
PEP Infomation	pep chromosome:IRGSP-1.0:2:9902631:9907870:1 gene:Os02g0272600 transcript:Os02t0272600-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Aph-1 family protein. (Os02t0272600-01);Similar to gamma-secretase subunit APH-1B. (Os02t0272600-02)
Sequence	MTVAAGLGYALVALGPAFSLFAGVVARKPFLVLTLLTSTLFWLISLIILSGIWRVFLPIR SGAWWPYAILILTSVAFQEGIRLVFWRLYKKMEEMLDSFADRISKPRLCLTDKMLISLAG GLGHGVAHAVFFCLSLLTPAFGRATFYVEKCSRMPFFLVSAIISLGFLVIHTFSMIIAFN GYDERKRSDQVFVPVVHLIASVMTLINLAPGGCVIGTPLLCVMGAVTLQYCWQMVWRRLS EQQHRQFSS

Transcript Sequence

Transcript ID	Os02t0272600-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:9902631:9907870:1 gene:Os02g0272600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Aph-1 family protein. (Os02t0272600-01);Similar to gamma-secretase subunit APH-1B. (Os02t0272600-02)
Sequence	ACTTCTGCTCATTCCGAAGCCTTCGCCGCGTCTCGCCGGCGTACGCCGCAGGCGCCCCAC CTCCTCCGGCGAGCCAGCTCGGAGCTAGACGCCTGCCCTCCCCACTCTCGCCGGCGGTGG GCGCGCGGGTGGAGCCCCTGCGTTGGCCGGACGGCGGGAGGAGATGACGGTGGCGGCGGG GTTAGGGTACGCGCTGGTCGCGCTGGGCCCCGCCTTCTCCCTCTTCGCCGGCGTCGTCGC CAGGAAGCCCTTCCTCGTCCTCACCCTTCTCACCAGCACTTTATTCTGGCTTATAAGTTT GATAATTCTCTCGGGAATATGGAGGGTATTTCTCCCTATAAGATCAGGAGCTTGGTGGCC GTATGCAATTCTTATCCTTACATCTGTTGCATTTCAAGAAGGCATTCGTCTTGTCTTTTG GAGGCTTTACAAGAAAATGGAAGAGATGCTGGATTCCTTTGCTGATAGAATATCTAAACC GCGCCTCTGTTTGACAGACAAGATGCTAATATCGTTGGCTGGTGGTTTAGGCCATGGAGT GGCTCATGCCGTCTTTTTCTGCCTCAGCCTTTTAACTCCAGCATTCGGCAGAGCTACATT TTATGTTGAAAAGTGCTCAAGGATGCCATTTTTCCTTGTGTCAGCCATTATTTCTCTTGG ATTCTTGGTCATCCACACATTCTCAATGATTATTGCTTTTAATGGGTACGACGAGAGAAA GAGAAGTGATCAAGTATTTGTCCCAGTTGTTCATCTGATTGCTTCTGTAATGACACTAAT CAATCTTGCACCTGGGGGCTGCGTAATTGGTACACCACTATTATGCGTCATGGGTGCAGT GACGTTGCAATACTGCTGGCAAATGGTATGGCGGAGATTATCTGAGCAGCAGCATCGGCA GTTTAGCAGCTAGTGCCTGGCAATGCTCCTTACATGTATCTTCTCATGTCCAATTTTAAT AATCTTTTGTTTGGGGTACTAGGGCAAGAAGTTGTAAACGTAGCGAATTAGCGATTATAC CACTAGTGGGATTCACATCTTATGAAAATTGCATGCAATTCAACGTCATGACTGAGACAT TGAAGCCCATCTGTTTGGTTGCTCATG