Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0272400-00
CDS Infomation

cds chromosome:IRGSP-1.0:2:9888890:9893654:-1 gene:Os02g0272400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to predicted protein. (Os02t0272400-00)
Sequence

ATGGCGCTGCTGGGCGACGCGCTGCGGCAGGCGTTCATGCCGCGGCGGGCGTACGCGGCG
CTGCGGGACGAGGAGCGCGCGCTGCCGCGGCTCCGCCGCCCGCTGGCGGCGGCCGCGGGG
GCGTGCGTGGCGGCCGCGGTGGCCGCCGCGGCCGGGGTCAGCCTCGGGATCGTGTTCCCC
GCCGAGCCCGCCGAGCGGCCCTTCTGCCGCGAGCGCCGCATGCTGGAGGCCCTCCCCGCC
GCGGCCAGCAGCAGGGAGGAGGAGCCCGAGGCGTACCGGTACCGCGGCGGGGCCTTCTAC
ATGACCACCGCCGAGGCCGCCGACTTCTACTGGATGGTCGTCTTCGTCCCGTCCGCCCTC
CTCTTCGCCGTCTCGTCTGCCTACCTTGTATCTGGCATATCTGTTGCATATGCTGCTCCA
AGAAGACATCCATTGATTTGTGTCGTCGAGAATAACTTCTGTGCTTCTAAAAGAGGTGGT
GTGCGTTGCTTGGCTATACTAAATGCAGTTTTTGCTGTCATATTTGGTCTCATGGCAATT
ATTCTTGGATCAACGCTTCTGGCTCTTGGAAGTAGTTGTTCTGTTCCTCTCTTCTGGTGC
TATGAAATTACAGCATGGGGTTTGGTAATCCTATATGCTGGCACTGCCTTCTTCTTGAGA
AGGAAAGCTGCGGTGATCCTTGATGAGGGTGATTACACTCCCCACAATGTGGGTCTAGAA
ATGCTGGAGACAACAATAGAAGTAACCCCAGAGATGCAGAGGCGAATTAATGATGGTTTC
AAGTCATGGATGGGGCCGTCTACTCTATCTTCTGATGATGAGGAGGAAGCTTCGGATGAC
TATATAGAGCACAATGTGCCTATCCCAACTGCGTCAGTTCAAGTCAGGCAAGAGAATGAT
CTAGAGAGTTGA

Peptide Sequence

PEP ID

Os02t0272400-00
PEP Infomation

pep chromosome:IRGSP-1.0:2:9888890:9893654:-1 gene:Os02g0272400 transcript:Os02t0272400-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to predicted protein. (Os02t0272400-00)
Sequence

MALLGDALRQAFMPRRAYAALRDEERALPRLRRPLAAAAGACVAAAVAAAAGVSLGIVFP
AEPAERPFCRERRMLEALPAAASSREEEPEAYRYRGGAFYMTTAEAADFYWMVVFVPSAL
LFAVSSAYLVSGISVAYAAPRRHPLICVVENNFCASKRGGVRCLAILNAVFAVIFGLMAI
ILGSTLLALGSSCSVPLFWCYEITAWGLVILYAGTAFFLRRKAAVILDEGDYTPHNVGLE
MLETTIEVTPEMQRRINDGFKSWMGPSTLSSDDEEEASDDYIEHNVPIPTASVQVRQEND
LES

Transcript Sequence

Transcript ID

Os02t0272400-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:9888890:9893654:-1 gene:Os02g0272400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to predicted protein. (Os02t0272400-00)
Sequence

CTTCCTCCCAAATCCCCCCATGCCTCCCAATTCCCACACCTACCCGCCTCACCGCGTCTA
GGGTTGCCGCCGCCGCCGCCGCCGCCGCCGCCGGCCACCGACACCTACCCCCCCACCCGC
TCTTCCAGGCGCCGCCGCTGCCGCTGCGGGCGATGGCGCTGCTGGGCGACGCGCTGCGGC
AGGCGTTCATGCCGCGGCGGGCGTACGCGGCGCTGCGGGACGAGGAGCGCGCGCTGCCGC
GGCTCCGCCGCCCGCTGGCGGCGGCCGCGGGGGCGTGCGTGGCGGCCGCGGTGGCCGCCG
CGGCCGGGGTCAGCCTCGGGATCGTGTTCCCCGCCGAGCCCGCCGAGCGGCCCTTCTGCC
GCGAGCGCCGCATGCTGGAGGCCCTCCCCGCCGCGGCCAGCAGCAGGGAGGAGGAGCCCG
AGGCGTACCGGTACCGCGGCGGGGCCTTCTACATGACCACCGCCGAGGCCGCCGACTTCT
ACTGGATGGTCGTCTTCGTCCCGTCCGCCCTCCTCTTCGCCGTCTCGTCTGCCTACCTTG
TATCTGGCATATCTGTTGCATATGCTGCTCCAAGAAGACATCCATTGATTTGTGTCGTCG
AGAATAACTTCTGTGCTTCTAAAAGAGGTGGTGTGCGTTGCTTGGCTATACTAAATGCAG
TTTTTGCTGTCATATTTGGTCTCATGGCAATTATTCTTGGATCAACGCTTCTGGCTCTTG
GAAGTAGTTGTTCTGTTCCTCTCTTCTGGTGCTATGAAATTACAGCATGGGGTTTGGTAA
TCCTATATGCTGGCACTGCCTTCTTCTTGAGAAGGAAAGCTGCGGTGATCCTTGATGAGG
GTGATTACACTCCCCACAATGTGGGTCTAGAAATGCTGGAGACAACAATAGAAGTAACCC
CAGAGATGCAGAGGCGAATTAATGATGGTTTCAAGTCATGGATGGGGCCGTCTACTCTAT
CTTCTGATGATGAGGAGGAAGCTTCGGATGACTATATAGAGCACAATGTGCCTATCCCAA
CTGCGTCAGTTCAAGTCAGGCAAGAGAATGATCTAGAGAGTTGACTAATGTATAAACAGA
TGTACATAGTGCTCCACTTATTCCTTGATGTTTGGTAATGTTTGTAAATGCTTGGCGTGG
GTTTTGACTGCTAACAAGTGATTTTGTTTGTTCTTTTCCCCTAGAGGAAACAAATGTTGA
GGGTTAGTTAGCCACTGAAGTTCATACAAGAGGTTACCTTTTT