Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0272300-01
CDS Infomation	cds chromosome:IRGSP-1.0:2:9885649:9888391:1 gene:Os02g0272300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:guanine nucleotide exchange factor for Rop 3 description:Similar to Pollen-specific kinase partner protein. (Os02t0272300-01)
Sequence	ATGGTGCGGTTCCTCCGGCGCCATAGCCTCGACAAGAACAGCGCGCAGTTCCATCGCCAG CTGAGCCACGACAGCAGCAGCAGCAGCAGCGACACCGCCGACATGCACGAGCCTCACGGC AATGGCAGCGGGGGCACTCCCCCGCTGCCCAACGGGAGAGCCGCCGCCGCAGGCGCGCCG CGCTCCCGCTTCGGCCGCGACGGGCCGCCCTCCGATTTGGACGTGATGAAGGAGAGGTTC GCGAAGCTCCTGCTGGGCGAGGACATGTCCGGCACCGGCAAGGGCGTGTCGTCGGCGCTG GCGCTGTCGAATGCGATCACGAACCTGGCGGCGTCCGTGTTCGGCGAGCACCGCAAGCTG GAGCCCATGGCGCCGGACACCAAGGAGCGGTGGAAGAAGGAGGTCGGGTGGCTCCTCTCC GTCACCGACCACATCGTCGAGTTCGTCCCCACCCGCCAGACCGCCGAGAACGGCACCACC ATGGAGATCATGTCCACCGCCCAGCGCCGCGACCTCCAGATGAACGTCCCCGCCCTCCGC AAGCTCGACGCCATGCTCATCGGGTACATGGACAACTTCGTGGACCAGAGCGAGTTCTGG TACGAGAAGGGAGGGGACAACAAGAGGGACGACGACAAGTGGTGGATGCCGACGGTGAAG GTGCCGGCGGAGGGGCTATCGGAGGTGACGAGGAAGTGGCTGCAGTACCAGAAGGAGTGC GTGAACCAGGTGCTGAAGGCGGCCATGGCGATCAACGCGCAGGTGCTGGTGGAGATGGAG ATCCCGGAGGTGTACATCGAGTCGCTGCCCAAGAAGGGCAAGACCAGCCTCGGCGACGCC ATCTACCGGAGCATCACCGACGAGGAGTTCGACCCGATCGAGTTCCTGGAAGGCGTGGAC CTGTCCACGGAGCACAAGGTGCTCGACCTCAAGAACCGCATCGAGGCGTCCACCATCATC TGGAAGCGCAAGATGCAGACCAAGCAGGAGGCCAAGTCGTCGTGGGGCTCCATCATCAGC TTCGAGAAGCGCGAGCAGTTCGAGGAGCGCGCCGAGACCATCCTCCACCTCCTCAAGCTC CAGTTCCCCGGCACCCCTCAGTCCCAGCTCGACATCTCCAAGATCCAATACAACCGGGAC GTGGGGTACGCGATACTGGAGAGCTACTCGAGGGTGCTGGAGAGCCTGGCGTACAGCGTG ATGTCGAGGATAGAGGACGTGCTGGGGGCGGACGCGGCGGCGCAGAACCTGACGGCGACG GAGGCGGCGAGGAGGCTGATGGACGGGGACGCGGCGGCGAGGAAGCTGGACGCCATGGAG GAGCTGGAGAAGCTCAACGAGGCGCCGGCGTCCATGACGCTCTACGACTTCATGGGGTGG CACTTCGACCAGGACGAGCTCATGAGGAAGAAGGAGGAAGGCACCCTCGACGAGGCCGGC GAGGCCAAGCTCAAGAAGGCCCCCAGCCTCGCCCCCAAGAAGTTCTCCTACGTCGACAGC CTCTCCGCCGGCGGCATGAGGAGCCCCTCCGCGCGCCACTGA

Peptide Sequence

PEP ID	Os02t0272300-01
PEP Infomation	pep chromosome:IRGSP-1.0:2:9885649:9888391:1 gene:Os02g0272300 transcript:Os02t0272300-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:guanine nucleotide exchange factor for Rop 3 description:Similar to Pollen-specific kinase partner protein. (Os02t0272300-01)
Sequence	MVRFLRRHSLDKNSAQFHRQLSHDSSSSSSDTADMHEPHGNGSGGTPPLPNGRAAAAGAP RSRFGRDGPPSDLDVMKERFAKLLLGEDMSGTGKGVSSALALSNAITNLAASVFGEHRKL EPMAPDTKERWKKEVGWLLSVTDHIVEFVPTRQTAENGTTMEIMSTAQRRDLQMNVPALR KLDAMLIGYMDNFVDQSEFWYEKGGDNKRDDDKWWMPTVKVPAEGLSEVTRKWLQYQKEC VNQVLKAAMAINAQVLVEMEIPEVYIESLPKKGKTSLGDAIYRSITDEEFDPIEFLEGVD LSTEHKVLDLKNRIEASTIIWKRKMQTKQEAKSSWGSIISFEKREQFEERAETILHLLKL QFPGTPQSQLDISKIQYNRDVGYAILESYSRVLESLAYSVMSRIEDVLGADAAAQNLTAT EAARRLMDGDAAARKLDAMEELEKLNEAPASMTLYDFMGWHFDQDELMRKKEEGTLDEAG EAKLKKAPSLAPKKFSYVDSLSAGGMRSPSARH

Transcript Sequence

Transcript ID	Os02t0272300-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:9885649:9888391:1 gene:Os02g0272300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:guanine nucleotide exchange factor for Rop 3 description:Similar to Pollen-specific kinase partner protein. (Os02t0272300-01)
Sequence	TCGCAAATCCGGCCGCGAGCGCGCGCGAGCGCGACATGCACCCCACGTTCGCGCGCGGCT TAAATTAGGCAAGAGGCGCGCCACGGTCGCGCCTTCTTTGTCTCTCCCTTGTTTTTTTTT AAATTTTTTTATAAGCTGCGAGGCCGCGTCGTCCGCCATTCTCTTCTTCTTCTTGTTGCA CACCGCCGGCCGGCCGTGCGTAGTGCGTGGCATGTCCGTGTTCCCCCTAGCAGCTGATTG ATTTGATTTGGTTTTTTTCTTTGCTTGATTACTTCCTTCGATCTTGCCCTGGTTGGTTGG TGGTGGTGGTGGGTTTTGCTATCTCTGCGTGCGTGTTCCGGCCGTGTCGGCGGCGGCGAG CGTGAGGAGGCGCGGCGGCGGAGGCGGCGGTGAGCGAACGGCGGGTGCCACGTGCCCACG CCTTGCGCGCGAAGCTCGAGGCGGTGGGCTGGGTGATGGTGCGGTTCCTCCGGCGCCATA GCCTCGACAAGAACAGCGCGCAGTTCCATCGCCAGCTGAGCCACGACAGCAGCAGCAGCA GCAGCGACACCGCCGACATGCACGAGCCTCACGGCAATGGCAGCGGGGGCACTCCCCCGC TGCCCAACGGGAGAGCCGCCGCCGCAGGCGCGCCGCGCTCCCGCTTCGGCCGCGACGGGC CGCCCTCCGATTTGGACGTGATGAAGGAGAGGTTCGCGAAGCTCCTGCTGGGCGAGGACA TGTCCGGCACCGGCAAGGGCGTGTCGTCGGCGCTGGCGCTGTCGAATGCGATCACGAACC TGGCGGCGTCCGTGTTCGGCGAGCACCGCAAGCTGGAGCCCATGGCGCCGGACACCAAGG AGCGGTGGAAGAAGGAGGTCGGGTGGCTCCTCTCCGTCACCGACCACATCGTCGAGTTCG TCCCCACCCGCCAGACCGCCGAGAACGGCACCACCATGGAGATCATGTCCACCGCCCAGC GCCGCGACCTCCAGATGAACGTCCCCGCCCTCCGCAAGCTCGACGCCATGCTCATCGGGT ACATGGACAACTTCGTGGACCAGAGCGAGTTCTGGTACGAGAAGGGAGGGGACAACAAGA GGGACGACGACAAGTGGTGGATGCCGACGGTGAAGGTGCCGGCGGAGGGGCTATCGGAGG TGACGAGGAAGTGGCTGCAGTACCAGAAGGAGTGCGTGAACCAGGTGCTGAAGGCGGCCA TGGCGATCAACGCGCAGGTGCTGGTGGAGATGGAGATCCCGGAGGTGTACATCGAGTCGC TGCCCAAGAAGGGCAAGACCAGCCTCGGCGACGCCATCTACCGGAGCATCACCGACGAGG AGTTCGACCCGATCGAGTTCCTGGAAGGCGTGGACCTGTCCACGGAGCACAAGGTGCTCG ACCTCAAGAACCGCATCGAGGCGTCCACCATCATCTGGAAGCGCAAGATGCAGACCAAGC AGGAGGCCAAGTCGTCGTGGGGCTCCATCATCAGCTTCGAGAAGCGCGAGCAGTTCGAGG AGCGCGCCGAGACCATCCTCCACCTCCTCAAGCTCCAGTTCCCCGGCACCCCTCAGTCCC AGCTCGACATCTCCAAGATCCAATACAACCGGGACGTGGGGTACGCGATACTGGAGAGCT ACTCGAGGGTGCTGGAGAGCCTGGCGTACAGCGTGATGTCGAGGATAGAGGACGTGCTGG GGGCGGACGCGGCGGCGCAGAACCTGACGGCGACGGAGGCGGCGAGGAGGCTGATGGACG GGGACGCGGCGGCGAGGAAGCTGGACGCCATGGAGGAGCTGGAGAAGCTCAACGAGGCGC CGGCGTCCATGACGCTCTACGACTTCATGGGGTGGCACTTCGACCAGGACGAGCTCATGA GGAAGAAGGAGGAAGGCACCCTCGACGAGGCCGGCGAGGCCAAGCTCAAGAAGGCCCCCA GCCTCGCCCCCAAGAAGTTCTCCTACGTCGACAGCCTCTCCGCCGGCGGCATGAGGAGCC CCTCCGCGCGCCACTGATCACCACCACCGCCGCCATTACACTCTCTCTCACACGCACAAG ATGATCGGCACCATCGCCGGAGTCGGACAAGATGACCGGCGCCGCCGCTTTCTTGCACGC TGTACATAACCGAACTCGACGGACACTAGAGATCAACGACGACACTGGAGTAGAGATCAG CTTGATTATTAATCTAATCAGCATCTAATCTCTTCTTACCAATGCCAATTAATGCTGGGA GGTAATTACTATTGATTTCTTTTTTTTTCTTCCTTCTCCATCTTTATTCTAGAGGGGGAA AAGAACAAAGGTGGTTTCATCTGCAATACCTGCAATTCGACGCCATTGCTACTGATCATG TAACTAGTACTGGTTTGTACCAAGCAGTTCTGAGTTCTCTTGAAAAAAGGAGAAGATGAA CTCCTTGGGATGTATGTATGTAACTGGGTGGACGGGGAACACACACTGTATTCTTTCATT TGTTTCAAACTAATCTTTTTGTT