Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0271900-01
CDS Infomation

cds chromosome:IRGSP-1.0:2:9848231:9852383:1 gene:Os02g0271900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Myb transcription factor domain containing protein. (Os02t0271900-01)
Sequence

ATGGCGAGCAGAGCAGTGGAGGGGGAAGGGGAGGGGGAGGAGGAGGGGGAGGGGAAGGGT
AACCTGGCTAATGCACCGGAAGACAGTCACAAGCATTGCCAAGGAGAAGAATTAGAAGCT
GGCCAGTCTTGCAAGATAAATTATCAAGACATCATGGACAAGTGCGGTATTGAAATATCT
GAAAAAAGAAGGCGGCGATGGTCAACAAAGGAGGATGAGTCACTTATTCAAATGATTAAC
ATATATGGGCATAACAACTGGGAAACTGTTGCACGCGCTATACCTGGTCGAAATGCACAA
CAATGCAGAGTAAGGTGGAAATTCAATCTAGACCCTGCAATCAGCAAACAGGCGTGGTCA
CGAGAGGAGGAGCTAAGATTGATTCATGTCCAACAAATTTTTGGAAATAAGTGGTGTAGA
ATGGCTGAACATTTCACAGGGAGGACAAGTGCTGCAATCAAAGAACACTGGAGAGGTCCT
ATGAAAAGAAAATTAAATTCGTATTTAGCTTCAGGATTGCTCAAAAAATCTCCTGGTCTG
CCTGAAAATCTATCAGTTTCGCAGAGTAGTGACTCAAATATTCTTCAGCAGTGTGATGTT
TCATCTGATGAGAATAAACTGTTATCAGATTTACGACCAAGCCTAAAATCTAAAGAAGGG
GTGAGCTCAAAATGTGATGGTTCATCTTCTGATAATCAACTGTTATCAGATTTACGAGCA
AGCCTAAAATCTAAAGGGGCAAGCTCAAAGTGTGATGGTTCATCTGGTGATAATCAACTG
TTATCAGATTTACGAGCAAGCCTAAAATCTAAAGGGGCAAGCTCAAAGTGTGATGGTTCA
TCTGGTGATAATCAACTGTTATCAGATTTACGAGCAAGCTTAAAATCTAAAGGGGCAAGC
TCAAAATGTGATGGTTCATCTGATGAGAATAAACTATTATCAGATTTACGAGCATGCTTA
AAATCTAAACAAGGGGCAAGCTCAAAATGTGATGGTTCATCTGGTGAGAATCAGTTGTTA
TCAGATTTACAAGCAAGTTTAATGTCTAAACAAAGAACAAGCTCAAAATATAAACAAGGG
GCAAGCTCCAAATATAAACAAGGGGCAAGCTCCAAATCTAAACAAGGGACAAGCTCAAAG
TCTAAACAAGGGTTCATAGACCTATGTGAAAATACTGATACATCAGAAGGAGAAAGTTCT
GAGTTGATATGTACAGAAAGACCAGATCCTGATTCAGGTGAAGCTTCTCAGAGGATAAGG
GATAGATTGAATTGGCGTAAAAGAGCAAGGAAGAAGCTGGTTTTCCTGTCAAGCCCGGTG
GAGCTCAAGGTGTCTGCTGTGGCAGAATCTGAAAGGCACTTACAGGAAAGTAAAGAAATG
AGTCCAGAAGTTAACATCGTTTCTCCACCAGCTGTACTCCAAGGTTTTTCACCAGAAGTT
CCATCAGTATGTGAAAAGATTGTCGAACCACCACTGGCTGATTTCAACCAAGCTAAGAAT
GTTTGTTCTTTGGAGACCTCCTCAGACCCATGCACACTGGAGCAACATCTGGCGAATGTC
TCAGATCTTCTAGACATGTCATACATCGATGGCTTGATGATCATTCCTCCTTCAGGTTGC
CCATACGATGGTGATTTCATATGA

Peptide Sequence

PEP ID

Os02t0271900-01
PEP Infomation

pep chromosome:IRGSP-1.0:2:9848231:9852383:1 gene:Os02g0271900 transcript:Os02t0271900-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Myb transcription factor domain containing protein. (Os02t0271900-01)
Sequence

MASRAVEGEGEGEEEGEGKGNLANAPEDSHKHCQGEELEAGQSCKINYQDIMDKCGIEIS
EKRRRRWSTKEDESLIQMINIYGHNNWETVARAIPGRNAQQCRVRWKFNLDPAISKQAWS
REEELRLIHVQQIFGNKWCRMAEHFTGRTSAAIKEHWRGPMKRKLNSYLASGLLKKSPGL
PENLSVSQSSDSNILQQCDVSSDENKLLSDLRPSLKSKEGVSSKCDGSSSDNQLLSDLRA
SLKSKGASSKCDGSSGDNQLLSDLRASLKSKGASSKCDGSSGDNQLLSDLRASLKSKGAS
SKCDGSSDENKLLSDLRACLKSKQGASSKCDGSSGENQLLSDLQASLMSKQRTSSKYKQG
ASSKYKQGASSKSKQGTSSKSKQGFIDLCENTDTSEGESSELICTERPDPDSGEASQRIR
DRLNWRKRARKKLVFLSSPVELKVSAVAESERHLQESKEMSPEVNIVSPPAVLQGFSPEV
PSVCEKIVEPPLADFNQAKNVCSLETSSDPCTLEQHLANVSDLLDMSYIDGLMIIPPSGC
PYDGDFI

Transcript Sequence

Transcript ID

Os02t0271900-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:9848231:9852383:1 gene:Os02g0271900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Myb transcription factor domain containing protein. (Os02t0271900-01)
Sequence

GTAAACGAAAATCTCCCGTCTCGTCTCCTCCGCTCCTTGCGCTTGCGCCAAGACGAGTCG
CGGCAGCCGATGGCGAGCAGAGCAGTGGAGGGGGAAGGGGAGGGGGAGGAGGAGGGGGAG
GGGAAGGGTAACCTGGCTAATGCACCGGAAGACAGTCACAAGCATTGCCAAGGAGAAGAA
TTAGAAGCTGGCCAGTCTTGCAAGATAAATTATCAAGACATCATGGACAAGTGCGGTATT
GAAATATCTGAAAAAAGAAGGCGGCGATGGTCAACAAAGGAGGATGAGTCACTTATTCAA
ATGATTAACATATATGGGCATAACAACTGGGAAACTGTTGCACGCGCTATACCTGGTCGA
AATGCACAACAATGCAGAGTAAGGTGGAAATTCAATCTAGACCCTGCAATCAGCAAACAG
GCGTGGTCACGAGAGGAGGAGCTAAGATTGATTCATGTCCAACAAATTTTTGGAAATAAG
TGGTGTAGAATGGCTGAACATTTCACAGGGAGGACAAGTGCTGCAATCAAAGAACACTGG
AGAGGTCCTATGAAAAGAAAATTAAATTCGTATTTAGCTTCAGGATTGCTCAAAAAATCT
CCTGGTCTGCCTGAAAATCTATCAGTTTCGCAGAGTAGTGACTCAAATATTCTTCAGCAG
TGTGATGTTTCATCTGATGAGAATAAACTGTTATCAGATTTACGACCAAGCCTAAAATCT
AAAGAAGGGGTGAGCTCAAAATGTGATGGTTCATCTTCTGATAATCAACTGTTATCAGAT
TTACGAGCAAGCCTAAAATCTAAAGGGGCAAGCTCAAAGTGTGATGGTTCATCTGGTGAT
AATCAACTGTTATCAGATTTACGAGCAAGCCTAAAATCTAAAGGGGCAAGCTCAAAGTGT
GATGGTTCATCTGGTGATAATCAACTGTTATCAGATTTACGAGCAAGCTTAAAATCTAAA
GGGGCAAGCTCAAAATGTGATGGTTCATCTGATGAGAATAAACTATTATCAGATTTACGA
GCATGCTTAAAATCTAAACAAGGGGCAAGCTCAAAATGTGATGGTTCATCTGGTGAGAAT
CAGTTGTTATCAGATTTACAAGCAAGTTTAATGTCTAAACAAAGAACAAGCTCAAAATAT
AAACAAGGGGCAAGCTCCAAATATAAACAAGGGGCAAGCTCCAAATCTAAACAAGGGACA
AGCTCAAAGTCTAAACAAGGGTTCATAGACCTATGTGAAAATACTGATACATCAGAAGGA
GAAAGTTCTGAGTTGATATGTACAGAAAGACCAGATCCTGATTCAGGTGAAGCTTCTCAG
AGGATAAGGGATAGATTGAATTGGCGTAAAAGAGCAAGGAAGAAGCTGGTTTTCCTGTCA
AGCCCGGTGGAGCTCAAGGTGTCTGCTGTGGCAGAATCTGAAAGGCACTTACAGGAAAGT
AAAGAAATGAGTCCAGAAGTTAACATCGTTTCTCCACCAGCTGTACTCCAAGGTTTTTCA
CCAGAAGTTCCATCAGTATGTGAAAAGATTGTCGAACCACCACTGGCTGATTTCAACCAA
GCTAAGAATGTTTGTTCTTTGGAGACCTCCTCAGACCCATGCACACTGGAGCAACATCTG
GCGAATGTCTCAGATCTTCTAGACATGTCATACATCGATGGCTTGATGATCATTCCTCCT
TCAGGTTGCCCATACGATGGTGATTTCATATGAGACATGAAAGGGGCACAGACAAGTAGA
CCGCGCTGGTATTGCACTAGCAATCCATTGTAAAAAAAAACAAGAAAACCGCTATGCTGC
TGTGCATCTTTTGATGAACTTACATAGTTCCTGTCTAATTATCTTTGCATTAGATCAAGA
ACCTATCTCGAAAAGAGCTAGCAATGTTGTTCTGTTAGCAATGTTGTCCTGTGCTGCATC
TTTTGACCCTCCATAGGTACAATATATGAGCATGTGGTATTGCG