Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0265400-02
CDS Infomation	cds chromosome:IRGSP-1.0:2:9458448:9463658:-1 gene:Os02g0265400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Vacuolar protein sorting 29 (Vesicle protein sorting 29) (hVPS29) (PEP11). Splice isoform 2. (Os02t0265400-01);Similar to Vacuolar protein sorting 29 (Vesicle protein sorting 29) (hVPS29) (PEP11). Splice isoform 2. (Os02t0265400-02)
Sequence	ATGGTGCTGGTGCTCGCGCTCGGGGATCTGCACGTGCCGCACCGGGCGGCCGACCTGCCG GCCAAGTTCAAGTCCATGCTCGTCCCGGGCAAGATCCAGCACATCATCTGCACGGGGAAC CTCTGCATCAAGGAAGTTCATGACTACCTGAAAAGCCTTTGTCCTGATCTCCATATAACC AGAGGTGAATATGATGAGGATGCTCGTTACCCAGAGACTAAGACACTTACTATTGGTCAG TTCAAGCTAGGGCTGTGCCATGGTCATCAGGTTGTTCCATGGGGCGATTTGGACTCCCTG GCGATGCTCCAACGGCAGCTGGACGTGGACATCCTCGTCACAGGGCACACCCACCAGTTC AAGGCGTACAAGCACGAGGGGGGAGTGGTCATCAACCCCGGCTCCGCCACGGGCGCCTAC AGCAGCATCACCTACGACGTGAACCCGAGCTTCGTGCTCATGGACATCGACGGCCTCCGC GTGGTCGTCTACGTGTACGAGCTGATCGACGGCGAGGTCAAGGTCGACAAGATCGACTTC AAGAAGACGGCGACGATGCACGCCTGA

Peptide Sequence

PEP ID	Os02t0265400-02
PEP Infomation	pep chromosome:IRGSP-1.0:2:9458448:9463658:-1 gene:Os02g0265400 transcript:Os02t0265400-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Vacuolar protein sorting 29 (Vesicle protein sorting 29) (hVPS29) (PEP11). Splice isoform 2. (Os02t0265400-01);Similar to Vacuolar protein sorting 29 (Vesicle protein sorting 29) (hVPS29) (PEP11). Splice isoform 2. (Os02t0265400-02)
Sequence	MVLVLALGDLHVPHRAADLPAKFKSMLVPGKIQHIICTGNLCIKEVHDYLKSLCPDLHIT RGEYDEDARYPETKTLTIGQFKLGLCHGHQVVPWGDLDSLAMLQRQLDVDILVTGHTHQF KAYKHEGGVVINPGSATGAYSSITYDVNPSFVLMDIDGLRVVVYVYELIDGEVKVDKIDF KKTATMHA

Transcript Sequence

Transcript ID	Os02t0265400-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:9458448:9463658:-1 gene:Os02g0265400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Vacuolar protein sorting 29 (Vesicle protein sorting 29) (hVPS29) (PEP11). Splice isoform 2. (Os02t0265400-01);Similar to Vacuolar protein sorting 29 (Vesicle protein sorting 29) (hVPS29) (PEP11). Splice isoform 2. (Os02t0265400-02)
Sequence	AGGATCGATCGAGCTCTCCCCCCCTCTCACTCACCTCGGGGGGCGCGGCGGTGGGGGGCT AGGGATTTGAGCCGGATCGCGGCGAGCTTGAAGGGGCGCGGACTGAGGCGGCGAGAGGAG CGGGTTTCCGGTTCGGGGGAAGGAGGGGAGGAGTAGTAGGAGGAGGAGGAGGAGATGGTG CTGGTGCTCGCGCTCGGGGATCTGCACGTGCCGCACCGGGCGGCCGACCTGCCGGCCAAG TTCAAGTCCATGCTCGTCCCGGGCAAGATCCAGCACATCATCTGCACGGGGAACCTCTGC ATCAAGGAAGTTCATGACTACCTGAAAAGCCTTTGTCCTGATCTCCATATAACCAGAGGT GAATATGATGAGGATGCTCGTTACCCAGAGACTAAGACACTTACTATTGGTCAGTTCAAG CTAGGGCTGTGCCATGGTCATCAGGTTGTTCCATGGGGCGATTTGGACTCCCTGGCGATG CTCCAACGGCAGCTGGACGTGGACATCCTCGTCACAGGGCACACCCACCAGTTCAAGGCG TACAAGCACGAGGGGGGAGTGGTCATCAACCCCGGCTCCGCCACGGGCGCCTACAGCAGC ATCACCTACGACGTGAACCCGAGCTTCGTGCTCATGGACATCGACGGCCTCCGCGTGGTC GTCTACGTGTACGAGCTGATCGACGGCGAGGTCAAGGTCGACAAGATCGACTTCAAGAAG ACGGCGACGATGCACGCCTGACCAAAAAACACATCAGAAAACCCTTCCCCGTCCTGCCCA GCCCTGCCCTTGTTTTTAGTTACCCTTTACCCTTCTTGCTTGATTCAGAGATCATCCCAT TTTCTCAAGCTTCCTTTTCTTCCTCGCTCTCGTCCTTGTGCAAAAGCTTGAGCCGTGTAT TCAGATTAGTTAATAATAAAAGATCGTCAAGAGTTGTCATGG