Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0260700-01
CDS Infomation	cds chromosome:IRGSP-1.0:2:9082763:9087989:1 gene:Os02g0260700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to GAMYB-binding protein (Fragment). (Os02t0260700-01);Similar to GAMYB-binding protein. (Os02t0260700-02)
Sequence	ATGGCCGGGAGCGAGGCGGCGGCGGCGCAGGAGGCGGAGATGGACCCGGACTTCTCGGGC GGGGGCGGTGGGGGCCCCAGCTTCGAGTTCGCCTTCAACTCGGTCAACTTCTCCGACCGG GTGCTCCGGATCGAGGTCGTCGCGGGGGACGACGACGACGACGACGACCACGCGCCCGGC TCCAGCCGGGACGGCGGGGCCGGCTCGCTCTCGGATTGGGCGCGCCACCGCAAGCGCCGC CGCGAGGAGCTCCTCAAGGAGAAAGAGTCTGAAGCAGTCATGCCAGACCAGATAAATTGC AAAGTAGAACCAGAAGAATGTGATGCATATGAAGAAAATCAAGAAGAACCTGTAGCAATG ATGGACGACTCTCCACCCAGTGTTGGCCCTGATGGTGATGATGGACCAAGTATGGACTCA CCTTGGAGTGGTGGGGTGAGCACACCAGTTCTAAGAGTAAAGAACATTTATATCAGTTCA GCGATTCTTGCAGCAAAAAGTCCTTTCTTTTTCAAGCTTTTCTCAAATGGCATGAAAGAA TCTGATGAGAGGCAGGCAACCCTTAGAATTACTGATTCAGAGGAAAATGCCCTTATGGAG CTTTTAAGCTTTATGTACAGTGGAAAGTTGACATCAACTGACCCTACTCTTCTACTGGAT ATTCTGATGGCTGCCGACAAGTTTGAGGTTATTTCGTGCATGAGGTACTGCAGTCAGTTG CTCACAAGCTTGACTATGACTACAGAATCTGCACTACTCTACCTAGATCTTCCATGCTCC ATTTCGATGGCTGCTGCAGTTCAACCTCTGACAGATGCAGCCAAGGAATATCTTTCCAAC AAATACAAGGATTTGACTAAGTTCCAAGATGAAGTGATGAACATCCCTCTTGCTGGAATC GAAGCCATCTTGTCAAGTAATGACCTCCAGGTGGCATCTGAAGATGCTATCTACGATTTC TTGATCAGGTGGGCTCGCGCACAATACCCTAAATCAGAGGAAAGGCGTGAGATCTTGAGT TCTCGTTTGCTTCCGCTCGTGCGATTCAGTCACATGACCTGTAGGAAGCTGCGGAAGGTC CTAATATGCACCGATCTGGACCATGAGCAAGCAACCAAGTGTGTCACTGAGGCACTTCTA TATAAAGCTGATGCTCCACACAGGCAACGTGCTCTCGCAGCAGACGTAACAACCTGTCAG AAATTTGCAGAGCGGGCTTACAAGTACAGACCTTTGAAAGTTGTTGAGTTTGACCGACCC TACCCACAGTGTATAGCATACTTGGATCTAAAGCGCGAAGAGTGCTCCCGGCTCTTCCCG TCAGGTCGGATGTACTCTCAAGCCTTCCATCTTGCAGGGCAGGGCTTCTTCCTCTCAGCA CACTGTAACATGGAACAGCAGAGTACGTTCTACTGCTTCGGTCTCTTCTTAGGGATGCAA GAGAAGGGCTCAATGAGCGTGACAGTAGATTATGAGTTTGCTGCAAGGACAAGACCGTCA GGAGAGTTTGTGAGCAAGTACAAGGGTAACTACACGTTCACCGGTGGGAAGGCGGTTGGT TACAGGAATCTCTTTGCGATACCATGGTCGACGTTCATGGCTGACGACAGCCTCTTCTTC CTCGACGGCGTGTTGCATCTGAGAGCTGAATTGACGATAAAGCAACCCACTGTCTAA

Peptide Sequence

PEP ID	Os02t0260700-01
PEP Infomation	pep chromosome:IRGSP-1.0:2:9082763:9087989:1 gene:Os02g0260700 transcript:Os02t0260700-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to GAMYB-binding protein (Fragment). (Os02t0260700-01);Similar to GAMYB-binding protein. (Os02t0260700-02)
Sequence	MAGSEAAAAQEAEMDPDFSGGGGGGPSFEFAFNSVNFSDRVLRIEVVAGDDDDDDDHAPG SSRDGGAGSLSDWARHRKRRREELLKEKESEAVMPDQINCKVEPEECDAYEENQEEPVAM MDDSPPSVGPDGDDGPSMDSPWSGGVSTPVLRVKNIYISSAILAAKSPFFFKLFSNGMKE SDERQATLRITDSEENALMELLSFMYSGKLTSTDPTLLLDILMAADKFEVISCMRYCSQL LTSLTMTTESALLYLDLPCSISMAAAVQPLTDAAKEYLSNKYKDLTKFQDEVMNIPLAGI EAILSSNDLQVASEDAIYDFLIRWARAQYPKSEERREILSSRLLPLVRFSHMTCRKLRKV LICTDLDHEQATKCVTEALLYKADAPHRQRALAADVTTCQKFAERAYKYRPLKVVEFDRP YPQCIAYLDLKREECSRLFPSGRMYSQAFHLAGQGFFLSAHCNMEQQSTFYCFGLFLGMQ EKGSMSVTVDYEFAARTRPSGEFVSKYKGNYTFTGGKAVGYRNLFAIPWSTFMADDSLFF LDGVLHLRAELTIKQPTV

Transcript Sequence

Transcript ID	Os02t0260700-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:9082763:9087989:1 gene:Os02g0260700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to GAMYB-binding protein (Fragment). (Os02t0260700-01);Similar to GAMYB-binding protein. (Os02t0260700-02)
Sequence	GCCCTTGTCGTCCAACCCTCCTCTCCTCCCCTCCTCGTCGCGGGGCTAGGGTTACGCCCC CTCCTCCTCCTCCTCCTCCTCCTCCTCGTGTGGGGGCATGGCCGGGAGCGAGGCGGCGGC GGCGCAGGAGGCGGAGATGGACCCGGACTTCTCGGGCGGGGGCGGTGGGGGCCCCAGCTT CGAGTTCGCCTTCAACTCGGTCAACTTCTCCGACCGGGTGCTCCGGATCGAGGTCGTCGC GGGGGACGACGACGACGACGACGACCACGCGCCCGGCTCCAGCCGGGACGGCGGGGCCGG CTCGCTCTCGGATTGGGCGCGCCACCGCAAGCGCCGCCGCGAGGAGCTCCTCAAGGAGAA AGAGTCTGAAGCAGTCATGCCAGACCAGATAAATTGCAAAGTAGAACCAGAAGAATGTGA TGCATATGAAGAAAATCAAGAAGAACCTGTAGCAATGATGGACGACTCTCCACCCAGTGT TGGCCCTGATGGTGATGATGGACCAAGTATGGACTCACCTTGGAGTGGTGGGGTGAGCAC ACCAGTTCTAAGAGTAAAGAACATTTATATCAGTTCAGCGATTCTTGCAGCAAAAAGTCC TTTCTTTTTCAAGCTTTTCTCAAATGGCATGAAAGAATCTGATGAGAGGCAGGCAACCCT TAGAATTACTGATTCAGAGGAAAATGCCCTTATGGAGCTTTTAAGCTTTATGTACAGTGG AAAGTTGACATCAACTGACCCTACTCTTCTACTGGATATTCTGATGGCTGCCGACAAGTT TGAGGTTATTTCGTGCATGAGGTACTGCAGTCAGTTGCTCACAAGCTTGACTATGACTAC AGAATCTGCACTACTCTACCTAGATCTTCCATGCTCCATTTCGATGGCTGCTGCAGTTCA ACCTCTGACAGATGCAGCCAAGGAATATCTTTCCAACAAATACAAGGATTTGACTAAGTT CCAAGATGAAGTGATGAACATCCCTCTTGCTGGAATCGAAGCCATCTTGTCAAGTAATGA CCTCCAGGTGGCATCTGAAGATGCTATCTACGATTTCTTGATCAGGTGGGCTCGCGCACA ATACCCTAAATCAGAGGAAAGGCGTGAGATCTTGAGTTCTCGTTTGCTTCCGCTCGTGCG ATTCAGTCACATGACCTGTAGGAAGCTGCGGAAGGTCCTAATATGCACCGATCTGGACCA TGAGCAAGCAACCAAGTGTGTCACTGAGGCACTTCTATATAAAGCTGATGCTCCACACAG GCAACGTGCTCTCGCAGCAGACGTAACAACCTGTCAGAAATTTGCAGAGCGGGCTTACAA GTACAGACCTTTGAAAGTTGTTGAGTTTGACCGACCCTACCCACAGTGTATAGCATACTT GGATCTAAAGCGCGAAGAGTGCTCCCGGCTCTTCCCGTCAGGTCGGATGTACTCTCAAGC CTTCCATCTTGCAGGGCAGGGCTTCTTCCTCTCAGCACACTGTAACATGGAACAGCAGAG TACGTTCTACTGCTTCGGTCTCTTCTTAGGGATGCAAGAGAAGGGCTCAATGAGCGTGAC AGTAGATTATGAGTTTGCTGCAAGGACAAGACCGTCAGGAGAGTTTGTGAGCAAGTACAA GGGTAACTACACGTTCACCGGTGGGAAGGCGGTTGGTTACAGGAATCTCTTTGCGATACC ATGGTCGACGTTCATGGCTGACGACAGCCTCTTCTTCCTCGACGGCGTGTTGCATCTGAG AGCTGAATTGACGATAAAGCAACCCACTGTCTAATGTACTGCTGCCAAACTCAAGTTGGC TTTGCGCTCGAGTGGGTGATAGTGCGAAACATCACATGCTGCAGATATCGTATTGTTTTT TTTCCCCTTCTTCTATGCTTAAACCCTTTTGTTGATAGAAACTTTGCAAATGACAAGTGG AAAAAAAAAGGACTAAAACCGGTCTCTTTTACTGGCATTGTGGAAGAAGCTTATGCTGCT CCAGTCGATTGTGAAAAGGTTACCATACCAGCTGAAGATATGATATATGAGCGCC