Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0258300-01
CDS Infomation	cds chromosome:IRGSP-1.0:2:8938210:8943482:-1 gene:Os02g0258300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, FYVE/PHD-type domain containing protein. (Os02t0258300-01);Similar to extra-large G-protein-related. (Os02t0258300-02)
Sequence	ATGGAGGCATTGGGAGATATGGAGGGGGAGGAGGGGCAGCGGCGGCAGCAGCAGATACGG GTGGTGCGGTGCCCCAAGTGCGAGAAGTTCTTGCCGGAGCTCCCCAACTACTCCGTCTAC GTCTGCGGCGGATGCGGCGCCACTCTCCAAGCAAAGAAGAACTCAGCATCTGAGAATTCC TCAGAGAAATCTGATGGTGGACATGTGAAGTACCTTGAAGTGCTGGAGAGTTCACCAGAT AACAAAGGAGCTGCATCTAAAGACACTTGTGAGGCTGCCCAAGAAGGAGAAGCCAAAAAT GGAGAAGCTAAAGCAGAAGAGAGACAGGTACTTCTTGACAGAATGGCAGCTTGTGATGAT AGCCGAATTCCAAGAGAACCAAATGCCTTGAAGCTTGAGGCTTCACTTAGAGATGACAGC AGGGAAATTCGGGAGGCCAAGTACCGGCGCATCCGCAGTGAGGACAAAGGAGAAGCAAAA CACACAGTGAGAGCCAGAGACAGATCGCCAAGATCAGTTGTTGATGCCATCCCTCCGAAT GCATATCCTGCAGAAGGCCCGTCTGACTACCATATTAAGTCAAGATTCAGACATACCAAT GGTGAGCAAGCTGATATGAGAAATTTGGAGGGCCTAAACAGAGTCAATGGTCTTGAAAAA GACCGTGCTGATCTGTTACGGATGCTTGATGAGCTGAGGGATCAGGTGCAGAGATCCTGT GAGATCACCAACAAGCCAAGTGGAAGTACTTCTACAGATAAAGCGGTGGATGCCTCAGGG TTATATAATCCTCGTGAGCGGTTGAGTCGGTTACGACATGGTTCACCTCAGTTGCAGCGG AGTGGTTCTCAGCAGTCACCATCCTTGAATGGGCAAGCTCCTTGCATTCCGCAAGCTTAT GCTCCAGGAACTGCTCAGCAAGATCTTCATGGATACGGGGAGCCAATGGCACACATGGGG GCTCCAAGCTATCCTGTTGGCACATATCCATGGAGAAATTTTGATAATTATTTTTATGGA CAGTATGATCCTGACCCTCTGATCTCTTACCACCATGATGGCTTCTACCATCAGCCTGCC TGTTCTTGTCTACATTGCTACCACCGTGAGTTCTTACCTGTTCAGGGGCCTCCTCTGGGT TTCAACCATCGCAGGGTACCACCGTATGTTATGAATAATCCTAGAGTTTACCCGGTTGAT GGTCCTGCAATGTTTGGCACACAGAATTACAATTCAAGAGTCAACGCTTCAATGCAGCGC AATCACATGAGGGCCGCTATGAGTAAAAAACCTGCACAGACTTGTGAACCGATTGCATGT GGTGCCCCATTCACTATATGCTACAACTGCTATGAAGTACTGCAACTTCCGAAGAAATCC CCCGTGCCAGGGAAGGATGAGTACAAATTACGTTGCGGGTCATGCTCACATGCGCTTGTG GTCAAGCTTGATGGAAGCAGGCTTGATGTTTCAGCACCTTCACCTATTTCACACATATCT GGCGGCAGCAAAATTAGTTCCAATGATGGCCAAGGAAGCAATGCGAATTCTGCTCCACAT GAGAGGGTGCTTCCACTTTATAGTTTTTCTGCAGCAAGTCATGGTTCTCAAGACCTACCC TCGAACTCAAGTGAAGCTGAAAAAATGCAAGGGATATCGTCTTCTTGCAGCATTTCTGAA GATGAGAACAGCCCTGCGAGATCTAATTCCCAGAGGGACACCCCTGGGTCTAGGGATCTT CATCCTGAAGCTGAGGTGTCTACCCGTGTTCCAAGTTTACATCTTCGTGATCATTTTGGA TACTCGCCATCTGAGAAGGTAGTTGATGGATCAGGGAAAGGAAGCAGAAGTACTCGATCT GAACATGAGAAGGCTGTGTTGACAGAAAGTTTCAAGCAGAACACTGTAAAAGATGTATCA GTAGTGAACATAATGGACTTGTCGGATGATGAGTATGATGATCCTGACTACATGCAAGAT CGAGGTGATGTGGCACAACCTGTAGATCACCCTCGGGCCGTGAAAACGGGTGATTCATTT TTCACCAATCTCATAAAGAAGAGCTTCAAAATTAACAACGGAATGGGCAATGGCAGAGCA AAGGTTTTCATTAATGGCTATCCCATCTCTGATCGGGCGGTCAGGAAGGCTGAGAAGATA GCTGGACCAATCTATCCTGGTGAATACTGGTATGATTACCGTGCTGGTTTCTGGGGTGTA ATGGGACAGTCTTGCCTCGGCATGATACCGCCATATATTCCAGAACTCAATTATCCTATG CCCAAGAAATGCGCTGCTGGAAATACAGGTGTATTTGTTAATGGGAGAGAACTTCACCAG AAGGATTTGGATTTACTTGTGGGTCGAGGACTCCCAGATTCTCCCGGTAGATCATACAGA GTTGAGATGTCCGGTAAAGTGTCGGATGAAGTCTCTGGTGAGGAGCTGTATTGTCTCGGC AAACTTGCACCAACCGTCGAGAAAATGAAGCGCGGATTTGGCATGAGAGTCCCCAGAATC ATCCCTTGA

Peptide Sequence

PEP ID	Os02t0258300-01
PEP Infomation	pep chromosome:IRGSP-1.0:2:8938210:8943482:-1 gene:Os02g0258300 transcript:Os02t0258300-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, FYVE/PHD-type domain containing protein. (Os02t0258300-01);Similar to extra-large G-protein-related. (Os02t0258300-02)
Sequence	MEALGDMEGEEGQRRQQQIRVVRCPKCEKFLPELPNYSVYVCGGCGATLQAKKNSASENS SEKSDGGHVKYLEVLESSPDNKGAASKDTCEAAQEGEAKNGEAKAEERQVLLDRMAACDD SRIPREPNALKLEASLRDDSREIREAKYRRIRSEDKGEAKHTVRARDRSPRSVVDAIPPN AYPAEGPSDYHIKSRFRHTNGEQADMRNLEGLNRVNGLEKDRADLLRMLDELRDQVQRSC EITNKPSGSTSTDKAVDASGLYNPRERLSRLRHGSPQLQRSGSQQSPSLNGQAPCIPQAY APGTAQQDLHGYGEPMAHMGAPSYPVGTYPWRNFDNYFYGQYDPDPLISYHHDGFYHQPA CSCLHCYHREFLPVQGPPLGFNHRRVPPYVMNNPRVYPVDGPAMFGTQNYNSRVNASMQR NHMRAAMSKKPAQTCEPIACGAPFTICYNCYEVLQLPKKSPVPGKDEYKLRCGSCSHALV VKLDGSRLDVSAPSPISHISGGSKISSNDGQGSNANSAPHERVLPLYSFSAASHGSQDLP SNSSEAEKMQGISSSCSISEDENSPARSNSQRDTPGSRDLHPEAEVSTRVPSLHLRDHFG YSPSEKVVDGSGKGSRSTRSEHEKAVLTESFKQNTVKDVSVVNIMDLSDDEYDDPDYMQD RGDVAQPVDHPRAVKTGDSFFTNLIKKSFKINNGMGNGRAKVFINGYPISDRAVRKAEKI AGPIYPGEYWYDYRAGFWGVMGQSCLGMIPPYIPELNYPMPKKCAAGNTGVFVNGRELHQ KDLDLLVGRGLPDSPGRSYRVEMSGKVSDEVSGEELYCLGKLAPTVEKMKRGFGMRVPRI IP

Transcript Sequence

Transcript ID	Os02t0258300-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:8938210:8943482:-1 gene:Os02g0258300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, FYVE/PHD-type domain containing protein. (Os02t0258300-01);Similar to extra-large G-protein-related. (Os02t0258300-02)
Sequence	AAGGCAAGAGGGGAAGCTTTGCATTTGCCCGGCCGACTCTCTTCTTGGTTCTTGGTTGTG GCGTCGGCGTCTCCGTGTTGTTTGGGCTGGCCACCGTTGCTCGCCGTTCTTGGGGGCAGG CAAACGGCACCGGCGGTATGGAGGCATTGGGAGATATGGAGGGGGAGGAGGGGCAGCGGC GGCAGCAGCAGATACGGGTGGTGCGGTGCCCCAAGTGCGAGAAGTTCTTGCCGGAGCTCC CCAACTACTCCGTCTACGTCTGCGGCGGATGCGGCGCCACTCTCCAAGCAAAGAAGAACT CAGCATCTGAGAATTCCTCAGAGAAATCTGATGGTGGACATGTGAAGTACCTTGAAGTGC TGGAGAGTTCACCAGATAACAAAGGAGCTGCATCTAAAGACACTTGTGAGGCTGCCCAAG AAGGAGAAGCCAAAAATGGAGAAGCTAAAGCAGAAGAGAGACAGGTACTTCTTGACAGAA TGGCAGCTTGTGATGATAGCCGAATTCCAAGAGAACCAAATGCCTTGAAGCTTGAGGCTT CACTTAGAGATGACAGCAGGGAAATTCGGGAGGCCAAGTACCGGCGCATCCGCAGTGAGG ACAAAGGAGAAGCAAAACACACAGTGAGAGCCAGAGACAGATCGCCAAGATCAGTTGTTG ATGCCATCCCTCCGAATGCATATCCTGCAGAAGGCCCGTCTGACTACCATATTAAGTCAA GATTCAGACATACCAATGGTGAGCAAGCTGATATGAGAAATTTGGAGGGCCTAAACAGAG TCAATGGTCTTGAAAAAGACCGTGCTGATCTGTTACGGATGCTTGATGAGCTGAGGGATC AGGTGCAGAGATCCTGTGAGATCACCAACAAGCCAAGTGGAAGTACTTCTACAGATAAAG CGGTGGATGCCTCAGGGTTATATAATCCTCGTGAGCGGTTGAGTCGGTTACGACATGGTT CACCTCAGTTGCAGCGGAGTGGTTCTCAGCAGTCACCATCCTTGAATGGGCAAGCTCCTT GCATTCCGCAAGCTTATGCTCCAGGAACTGCTCAGCAAGATCTTCATGGATACGGGGAGC CAATGGCACACATGGGGGCTCCAAGCTATCCTGTTGGCACATATCCATGGAGAAATTTTG ATAATTATTTTTATGGACAGTATGATCCTGACCCTCTGATCTCTTACCACCATGATGGCT TCTACCATCAGCCTGCCTGTTCTTGTCTACATTGCTACCACCGTGAGTTCTTACCTGTTC AGGGGCCTCCTCTGGGTTTCAACCATCGCAGGGTACCACCGTATGTTATGAATAATCCTA GAGTTTACCCGGTTGATGGTCCTGCAATGTTTGGCACACAGAATTACAATTCAAGAGTCA ACGCTTCAATGCAGCGCAATCACATGAGGGCCGCTATGAGTAAAAAACCTGCACAGACTT GTGAACCGATTGCATGTGGTGCCCCATTCACTATATGCTACAACTGCTATGAAGTACTGC AACTTCCGAAGAAATCCCCCGTGCCAGGGAAGGATGAGTACAAATTACGTTGCGGGTCAT GCTCACATGCGCTTGTGGTCAAGCTTGATGGAAGCAGGCTTGATGTTTCAGCACCTTCAC CTATTTCACACATATCTGGCGGCAGCAAAATTAGTTCCAATGATGGCCAAGGAAGCAATG CGAATTCTGCTCCACATGAGAGGGTGCTTCCACTTTATAGTTTTTCTGCAGCAAGTCATG GTTCTCAAGACCTACCCTCGAACTCAAGTGAAGCTGAAAAAATGCAAGGGATATCGTCTT CTTGCAGCATTTCTGAAGATGAGAACAGCCCTGCGAGATCTAATTCCCAGAGGGACACCC CTGGGTCTAGGGATCTTCATCCTGAAGCTGAGGTGTCTACCCGTGTTCCAAGTTTACATC TTCGTGATCATTTTGGATACTCGCCATCTGAGAAGGTAGTTGATGGATCAGGGAAAGGAA GCAGAAGTACTCGATCTGAACATGAGAAGGCTGTGTTGACAGAAAGTTTCAAGCAGAACA CTGTAAAAGATGTATCAGTAGTGAACATAATGGACTTGTCGGATGATGAGTATGATGATC CTGACTACATGCAAGATCGAGGTGATGTGGCACAACCTGTAGATCACCCTCGGGCCGTGA AAACGGGTGATTCATTTTTCACCAATCTCATAAAGAAGAGCTTCAAAATTAACAACGGAA TGGGCAATGGCAGAGCAAAGGTTTTCATTAATGGCTATCCCATCTCTGATCGGGCGGTCA GGAAGGCTGAGAAGATAGCTGGACCAATCTATCCTGGTGAATACTGGTATGATTACCGTG CTGGTTTCTGGGGTGTAATGGGACAGTCTTGCCTCGGCATGATACCGCCATATATTCCAG AACTCAATTATCCTATGCCCAAGAAATGCGCTGCTGGAAATACAGGTGTATTTGTTAATG GGAGAGAACTTCACCAGAAGGATTTGGATTTACTTGTGGGTCGAGGACTCCCAGATTCTC CCGGTAGATCATACAGAGTTGAGATGTCCGGTAAAGTGTCGGATGAAGTCTCTGGTGAGG AGCTGTATTGTCTCGGCAAACTTGCACCAACCGTCGAGAAAATGAAGCGCGGATTTGGCA TGAGAGTCCCCAGAATCATCCCTTGAGATCAGTGATTCTTCGGCACAACTGTAGAATTCA AGACCCCATTTTGGATGCTGTTTCGGTTCTTCTGCGAAATGCTTTGATGCTTGTTGGTTG TTGATTGTCCAGCCGTCTGTTTGCGTGGTCTCATGATCTGAGATGTATAATCTGTGGTTG CTTTGACTGGTGCTTGTCTGAAAAATTATCCAATGGAAATTTTGCAATGTGAAGTTTGTT TTGTGC