Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0258200-01
CDS Infomation

cds chromosome:IRGSP-1.0:2:8935193:8936223:-1 gene:Os02g0258200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to high mobility group family. (Os02t0258200-01)
Sequence

ATGCAGAGGACCGCCAAGGAGCTGCTCGAGCAGTATCTCAAGTTCCGGCAGGAGGCCGAC
GACGACGGCGACGGTGGTGACAACAAGAAGGCGAGCAAGAAAGGGAAGAAGAAGAAGAAG
GAGAAGGACCCCTCAAAGCCGAAGCAGCCCATGTCCGCCTACTTCGTCTACACCCAGCAG
CGCCGCGCGGCGCTCGTCGCCGAGAAGAAGAACGTCCCCGAGATCGGCAGGATCACCGGC
GAGGAGTGGAAGGCGATGTCCGAGGCGGAGAAGGCGCCGTTCGAGGCGGCGGCGCGGAAG
CAGAGGGAGGAGTACCAGGTGGAGATGGCGGCGTACCGGCAGAGGAAGCAGGAGGAGGCG
GCGTGCCAGGAGAAAGAGGAGGAGGAGCAGAAGAAGATCATGAAGCAGGAGGCGCTCCAG
CTGCTCAAGAAGAAGGAGAAGACGGACAACATCATCAAGAAGACCAAGGAGGAGCAGAGG
AAGAAGAAGGTGGGCGGCGCCGCCGCTGCCGCCGACCCGAACCGGCCCAAGAAGCCGGCG
TCGTCGTTCCTGCTGTTCAGCAAGGAGGCGAGGCGGCAGCTGGCGGAGGAGCGCCCCGGC
GTGGCGAGCTCCACGCTGACCGCGCTCGTGTCGGTGAAGTGGAAGGAGCTCGGGGAGGCG
GAGAAGCAGGCGTGGAACGGCAAGGCCGCGGAGGCCATGGCGGCGTACAAGAGGGACATG
GAGGAGTACACCAAGGCGGCGGCCAGCGGCGGCGGCGGCGGCGACGCCTCCCCCTGTACG
TCCTCCTCGGCCTCGTCCTAG

Peptide Sequence

PEP ID

Os02t0258200-01
PEP Infomation

pep chromosome:IRGSP-1.0:2:8935193:8936223:-1 gene:Os02g0258200 transcript:Os02t0258200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to high mobility group family. (Os02t0258200-01)
Sequence

MQRTAKELLEQYLKFRQEADDDGDGGDNKKASKKGKKKKKEKDPSKPKQPMSAYFVYTQQ
RRAALVAEKKNVPEIGRITGEEWKAMSEAEKAPFEAAARKQREEYQVEMAAYRQRKQEEA
ACQEKEEEEQKKIMKQEALQLLKKKEKTDNIIKKTKEEQRKKKVGGAAAAADPNRPKKPA
SSFLLFSKEARRQLAEERPGVASSTLTALVSVKWKELGEAEKQAWNGKAAEAMAAYKRDM
EEYTKAAASGGGGGDASPCTSSSASS

Transcript Sequence

Transcript ID

Os02t0258200-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:8935193:8936223:-1 gene:Os02g0258200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to high mobility group family. (Os02t0258200-01)
Sequence

GAGGAGCAGATGCAGAGGACCGCCAAGGAGCTGCTCGAGCAGTATCTCAAGTTCCGGCAG
GAGGCCGACGACGACGGCGACGGTGGTGACAACAAGAAGGCGAGCAAGAAAGGGAAGAAG
AAGAAGAAGGAGAAGGACCCCTCAAAGCCGAAGCAGCCCATGTCCGCCTACTTCGTCTAC
ACCCAGCAGCGCCGCGCGGCGCTCGTCGCCGAGAAGAAGAACGTCCCCGAGATCGGCAGG
ATCACCGGCGAGGAGTGGAAGGCGATGTCCGAGGCGGAGAAGGCGCCGTTCGAGGCGGCG
GCGCGGAAGCAGAGGGAGGAGTACCAGGTGGAGATGGCGGCGTACCGGCAGAGGAAGCAG
GAGGAGGCGGCGTGCCAGGAGAAAGAGGAGGAGGAGCAGAAGAAGATCATGAAGCAGGAG
GCGCTCCAGCTGCTCAAGAAGAAGGAGAAGACGGACAACATCATCAAGAAGACCAAGGAG
GAGCAGAGGAAGAAGAAGGTGGGCGGCGCCGCCGCTGCCGCCGACCCGAACCGGCCCAAG
AAGCCGGCGTCGTCGTTCCTGCTGTTCAGCAAGGAGGCGAGGCGGCAGCTGGCGGAGGAG
CGCCCCGGCGTGGCGAGCTCCACGCTGACCGCGCTCGTGTCGGTGAAGTGGAAGGAGCTC
GGGGAGGCGGAGAAGCAGGCGTGGAACGGCAAGGCCGCGGAGGCCATGGCGGCGTACAAG
AGGGACATGGAGGAGTACACCAAGGCGGCGGCCAGCGGCGGCGGCGGCGGCGACGCCTCC
CCCTGTACGTCCTCCTCGGCCTCGTCCTAGTCGCCATGGATGGCGATGGTGGTGGTGGTC
CTAACGCTGACGAGGATTCTCTTCTCTGAATCCAATGGAGAAAACAGTAGCTTTGGTGAT
TGGTGCGAAGTTATCTGTTGCGTTTGGTCTGGTTTAGGCGTAACATTTCGTATGGATTGG
GGTATTCTGCTTCAATTTTATAACTCAGCAAGCTTGAGAAATTTCAGCTTATTTTCATAC
ATTCTCGTATC