Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0256100-03
CDS Infomation	cds chromosome:IRGSP-1.0:2:8834599:8837476:1 gene:Os02g0256100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pectin lyase fold/virulence factor domain containing protein. (Os02t0256100-01);Pectin lyase fold/virulence factor domain containing protein. (Os02t0256100-02);Pectin lyase fold/virulence factor domain containing protein. (Os02t0256100-03)
Sequence	ATGGCCGCGTTGCATGGGCATGGCTTCGCGGTCACCGTGCTACTGGTGGTGTTGTTGGTG CAATGTGACGCGGCGGAGGCGACGACGTGCGCCGGTGCGGTGCCGGCGAGGCCACGGCCG GAGACGGTGTCCATCGCCGAGTTCGGCGGCGTGGGCGACGGCCGGACGGTGAACACGTGG GCGTTCCACAAGGCAGTGTACCGCATCCAGCACCAGCGCCGCCGCGGCGGCACCACGCTG CTCGTGCCGGCCGGAACGTGGCTCACCGGCAGCTTCAACCTCACCAGCCACATGACCCTC TTCCTCGCCAGGGGCGCCGTCCTCAAGGCCACACAGGAGACGAGGAGCTGGCCGCTGGCG GAGCCGCTGCCGTCGTACGGAAGGGGGAGGGAGCTGCCGGGGGCGAGGTACACCAGCTTC ATCCACGGCGACGGCCTCCGCGACATCGTGATTACAGGTGACAAGGGAATCATCGATGGA CAAGGTGATGTATGGTGGAACATGTGGAGGCAAAGGACACTTCAGCATACCAGGCCCAAC CTTCTGGAATTCATGCATTCCAGTGGCATTCACATCTCCAACATTGTTCTCAAGAATTCA CCCTTCTGGAACATCCATCCTGTTTATTGCGACAATGTGGTCATAACCAACATGATGATC ATCGCACCACATGACTCGCCCAACACCGATGGAGTTGATCCAGATTCTAGCACCAACGTA TGCATCGAGGACTCCTACATCTCAACCGGCGACGATCTCGTGGCCATCAAGAGCGGCTGG GACGAGTACGGCATCGCCTACGGGCGGCCGAGCTCGGGCATCACCATCAGGCGCGTCAGG GGCTCGTCCCCCTTCAGCGGCATCGCCATCGGCAGCGAGGCATCGGGAGGCGTCAGCAAC GTGCTGGTGGAGGACTGCAGCATCTTCAACAGCGGCTACGGCATCCACATCAAGACCAAC ATTGGGAGGGGCGGCTTCATCAGGAACATCACCGTTGACAACGTCCGCATGAACAGCGTC CGCAACGGGCTGCGCATCGCCGGCGATGTCGGTGACCACCCAGATGAGCACTTCAGCCAG CTCGCGCTGCCCACCGTGGATGCTGTCAGCATCAAGAACGTGTGGGGTGTCAATGTGCAG CAGCCCGGGTCGATCGAGGGGATCAGGAACTCGCCGTTCACGAGGATATGCCTCGCCAAC GTGAAGCTGTTTGGGTGGAGGAATAATGCAGCTTGGAAGTGCAGGGACGTCCATGGCGCG GCGCTGGGTGTGCAGCCGGGGCCGTGTGCAGAGCTCACGACCAGCCTTTCTTCAGGGTTC TGCAGCTATTAG

Peptide Sequence

PEP ID	Os02t0256100-03
PEP Infomation	pep chromosome:IRGSP-1.0:2:8834599:8837476:1 gene:Os02g0256100 transcript:Os02t0256100-03 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pectin lyase fold/virulence factor domain containing protein. (Os02t0256100-01);Pectin lyase fold/virulence factor domain containing protein. (Os02t0256100-02);Pectin lyase fold/virulence factor domain containing protein. (Os02t0256100-03)
Sequence	MAALHGHGFAVTVLLVVLLVQCDAAEATTCAGAVPARPRPETVSIAEFGGVGDGRTVNTW AFHKAVYRIQHQRRRGGTTLLVPAGTWLTGSFNLTSHMTLFLARGAVLKATQETRSWPLA EPLPSYGRGRELPGARYTSFIHGDGLRDIVITGDKGIIDGQGDVWWNMWRQRTLQHTRPN LLEFMHSSGIHISNIVLKNSPFWNIHPVYCDNVVITNMMIIAPHDSPNTDGVDPDSSTNV CIEDSYISTGDDLVAIKSGWDEYGIAYGRPSSGITIRRVRGSSPFSGIAIGSEASGGVSN VLVEDCSIFNSGYGIHIKTNIGRGGFIRNITVDNVRMNSVRNGLRIAGDVGDHPDEHFSQ LALPTVDAVSIKNVWGVNVQQPGSIEGIRNSPFTRICLANVKLFGWRNNAAWKCRDVHGA ALGVQPGPCAELTTSLSSGFCSY

Transcript Sequence

Transcript ID	Os02t0256100-03
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:8834599:8837476:1 gene:Os02g0256100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pectin lyase fold/virulence factor domain containing protein. (Os02t0256100-01);Pectin lyase fold/virulence factor domain containing protein. (Os02t0256100-02);Pectin lyase fold/virulence factor domain containing protein. (Os02t0256100-03)
Sequence	ATTTTTTCTTTGATGGCCGCGTTGCATGGGCATGGCTTCGCGGTCACCGTGCTACTGGTG GTGTTGTTGGTGCAATGTGACGCGGCGGAGGCGACGACGTGCGCCGGTGCGGTGCCGGCG AGGCCACGGCCGGAGACGGTGTCCATCGCCGAGTTCGGCGGCGTGGGCGACGGCCGGACG GTGAACACGTGGGCGTTCCACAAGGCAGTGTACCGCATCCAGCACCAGCGCCGCCGCGGC GGCACCACGCTGCTCGTGCCGGCCGGAACGTGGCTCACCGGCAGCTTCAACCTCACCAGC CACATGACCCTCTTCCTCGCCAGGGGCGCCGTCCTCAAGGCCACACAGGAGACGAGGAGC TGGCCGCTGGCGGAGCCGCTGCCGTCGTACGGAAGGGGGAGGGAGCTGCCGGGGGCGAGG TACACCAGCTTCATCCACGGCGACGGCCTCCGCGACATCGTGATTACAGGTGACAAGGGA ATCATCGATGGACAAGGTGATGTATGGTGGAACATGTGGAGGCAAAGGACACTTCAGCAT ACCAGGCCCAACCTTCTGGAATTCATGCATTCCAGTGGCATTCACATCTCCAACATTGTT CTCAAGAATTCACCCTTCTGGAACATCCATCCTGTTTATTGCGACAATGTGGTCATAACC AACATGATGATCATCGCACCACATGACTCGCCCAACACCGATGGAGTTGATCCAGATTCT AGCACCAACGTATGCATCGAGGACTCCTACATCTCAACCGGCGACGATCTCGTGGCCATC AAGAGCGGCTGGGACGAGTACGGCATCGCCTACGGGCGGCCGAGCTCGGGCATCACCATC AGGCGCGTCAGGGGCTCGTCCCCCTTCAGCGGCATCGCCATCGGCAGCGAGGCATCGGGA GGCGTCAGCAACGTGCTGGTGGAGGACTGCAGCATCTTCAACAGCGGCTACGGCATCCAC ATCAAGACCAACATTGGGAGGGGCGGCTTCATCAGGAACATCACCGTTGACAACGTCCGC ATGAACAGCGTCCGCAACGGGCTGCGCATCGCCGGCGATGTCGGTGACCACCCAGATGAG CACTTCAGCCAGCTCGCGCTGCCCACCGTGGATGCTGTCAGCATCAAGAACGTGTGGGGT GTCAATGTGCAGCAGCCCGGGTCGATCGAGGGGATCAGGAACTCGCCGTTCACGAGGATA TGCCTCGCCAACGTGAAGCTGTTTGGGTGGAGGAATAATGCAGCTTGGAAGTGCAGGGAC GTCCATGGCGCGGCGCTGGGTGTGCAGCCGGGGCCGTGTGCAGAGCTCACGACCAGCCTT TCTTCAGGGTTCTGCAGCTATTAGTGTGATCCAGTTGTATAATGTTTTTTGATTAGAAAG GTTGTGCTTGCTTTTTTTTTAGGTTTGACTGCTCCCTAATTGTGGTTGGGATTGATCAAT ATGTTAGGCTTGTGCTAATCAGTTAAGGAGTTTTAGGTGTCTTTTTGTTAGAGAAAGGTT TGGCTTCTAAGTTGTCAGTCTGAGTGCAAATATGTTCTAATCTGAATAATAAATCCCAGC TTGTGTG