Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0250300-01
CDS Infomation	cds chromosome:IRGSP-1.0:2:8490392:8498003:1 gene:Os02g0250300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:GENERAL TRANSCRIPTION FACTOR GROUP E4 description:Bromodomain containing protein. (Os02t0250300-01)
Sequence	ATGGCCTCGTCCCCTCCTGGCGCCGGCGCCGGCGGGGAGGAGCGGCCCGCGGCGAGCCCC GCGGCCCCGGCCGTGGCGGAGGCGGTGGAGGAGGGGCCGGTGACGTCGCGGTGGGCGCCG GAGATCAGGGTGTACCGGCGCAAGTACCCACGCAAAAACCCTAAACCCCCTCCGAACCCT AGCCCTAGCTCCAGCCCCCTCGCGCAAACCCTAGCCTCGATTCGGAGGTCGATTCGCCGC CCCGAGGATGGGCCTGCGGCGCCTCGGCCTGATCCGCCCGCCGCGCCCGCTTCCTCCCCC CATCCCCCTCCGCCGAGCGCCCCGGTTGCCCCCGCGCAGCAGGGGGAGCCCGCCGCGCCC GCTTCCGACGACGTCTCCGCGGGGCCTAATCGGGACGGCGGGGCCGTTCCCAACGGCCAT GGAGACGTCCGGGCGGCCGCCGAGGAGAAGGCGCGGAAGCGGAGGGCGCGGAGCGAGCTG CGGCGGCAGCTTGCGTCGGAGCTCGACCAGGTGCGTGGGCTTTCCAAGCGGCTGAAGGCG GCCGCTGAGGCCATCGCGGCTGAGTCTGCAGCGGCCCTTGCTTTGCCTGTGGTGGTGCCG CCGCCTCAGCTTCCTGTTGGGTATGCGCACTCGCAGTTCGCACTCGCTGATCCTGTGACG CCCATACCTGGTCAAGTTGCTGGTGCTATTGTTCCGGTCCGCTCAGTGATGCAGCGCGGG CCACTAACCGTGTCAGTGACTCACACAGAGTCCTTCGAGAAGGAGAAGCGGACACCAAAG GCGAATCAGTTGTATCAAAATTCAGAGTTCTTGCTTGCCAAGGATAAGTTTCCGCCTTCA GATTCACATGGTCGTAAGAAACCCAAGCACCACAAGAAGAAGCATCGTTCCTTAGCATCT CATGGTGCTGGTTATGATGCTGAGCAGAGGCTATACTCTCATGCTTTTAAGAAATCTATG TCGCTGCTTTCTAGGCTAATGAAGCACAAATTTGGTTGGGTGTTTAACAAGCCTGTAGAT GCTGTTGCGCTTGGTTTGCATGATTATTTTGCTATTATCAAGCACCCAATGGATCTTGGC ACGATAAAGACCCGACTCACGCATGGCCAGTACAGGAACCCGAGGGAGTTTGCTGATGAT GTACGGCTGACGTTCCATAATGCCATGACCTATAATCCCAAGGGGCAGGATGTGCATTTC ATGGCTGAGCAGTTGTTGGGAATCTTTGAGGCGCAGTGGCCCGAAATTGAGGCTGAGGTT CAGTACCTTGCCTCATGTCCGCCATTGCCAAATAAGTTTCCACCTCCACCAATTGACGTG CGCTTCCTTGATCGGTCAGATTCTGTAAAACACCATATGGTGTTGGACTCCAAGTCAAGG CCATTAAGTCATACTCCCACTTATAGTGCCAGGACTCCATCGATGAAGAAACCAAAGGCC AAGGATCCGGATAAGAGAGATATGACAATAGATGAGAAGCGGAAGCTTAGTAACAACCTT CAGAATTTGCCACCGGAGAAGCTTGATGTTGTTGTGCAGATCATTAAGAACAAGAATCTG TCTGTTAGACAGCATGATGATGAGATTGAGGTTGAAATAGATAGCATGGATACTGAGACA CTTTGGGAACTTGATAGATTTGTGGCCAACTACAAGAAGAACCTGAGCAAGCAAAAGAGG AAGGCTGAGCGAGCCATGCTTGCAAGGCAGGATGCAGAGTTGCATGCACAACATGTTGCC CCACAACAACCAAGTCAAGAGCCTAATATTGGTGTAAAATCTCCAAAGCAAAATTTGATT GTGGATGAGAAATTAGCTACTTCTGTGCCAGAACAAGCTGATAATAATGGACAAAATGCA AGTAGATCGAGCAGCTCTAGCAGCTCCAGCAGTGATACAGGATCCTCTTCTAGTGACTCA GACAGTGATAGCTCCTCTTCAGATGGATCAGATGCCGCCAATTCATCTTGA

Peptide Sequence

PEP ID	Os02t0250300-01
PEP Infomation	pep chromosome:IRGSP-1.0:2:8490392:8498003:1 gene:Os02g0250300 transcript:Os02t0250300-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:GENERAL TRANSCRIPTION FACTOR GROUP E4 description:Bromodomain containing protein. (Os02t0250300-01)
Sequence	MASSPPGAGAGGEERPAASPAAPAVAEAVEEGPVTSRWAPEIRVYRRKYPRKNPKPPPNP SPSSSPLAQTLASIRRSIRRPEDGPAAPRPDPPAAPASSPHPPPPSAPVAPAQQGEPAAP ASDDVSAGPNRDGGAVPNGHGDVRAAAEEKARKRRARSELRRQLASELDQVRGLSKRLKA AAEAIAAESAAALALPVVVPPPQLPVGYAHSQFALADPVTPIPGQVAGAIVPVRSVMQRG PLTVSVTHTESFEKEKRTPKANQLYQNSEFLLAKDKFPPSDSHGRKKPKHHKKKHRSLAS HGAGYDAEQRLYSHAFKKSMSLLSRLMKHKFGWVFNKPVDAVALGLHDYFAIIKHPMDLG TIKTRLTHGQYRNPREFADDVRLTFHNAMTYNPKGQDVHFMAEQLLGIFEAQWPEIEAEV QYLASCPPLPNKFPPPPIDVRFLDRSDSVKHHMVLDSKSRPLSHTPTYSARTPSMKKPKA KDPDKRDMTIDEKRKLSNNLQNLPPEKLDVVVQIIKNKNLSVRQHDDEIEVEIDSMDTET LWELDRFVANYKKNLSKQKRKAERAMLARQDAELHAQHVAPQQPSQEPNIGVKSPKQNLI VDEKLATSVPEQADNNGQNASRSSSSSSSSSDTGSSSSDSDSDSSSSDGSDAANSS

Transcript Sequence

Transcript ID	Os02t0250300-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:8490392:8498003:1 gene:Os02g0250300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:GENERAL TRANSCRIPTION FACTOR GROUP E4 description:Bromodomain containing protein. (Os02t0250300-01)
Sequence	GCGCACACGACCCCCCCGACCCGACGCCGCCACCACCCACCCCCGTCGCAGCAGCTCACC CCCACCTCCACCGCCATAGCCATAGCCAAGCCGCGGGAGCTCCAATCCGAGTCGACCCCG GCGGATTCCGGCAGGGCTAGGCGCGAATCCCTCGCCGCGGCGGCCGCCTGCATCGATCCG GGGCCTCGCGGGAGGGGGGGGACCGGATTTAGGGTTTAATTTATGCATGGCCTCGTCCCC TCCTGGCGCCGGCGCCGGCGGGGAGGAGCGGCCCGCGGCGAGCCCCGCGGCCCCGGCCGT GGCGGAGGCGGTGGAGGAGGGGCCGGTGACGTCGCGGTGGGCGCCGGAGATCAGGGTGTA CCGGCGCAAGTACCCACGCAAAAACCCTAAACCCCCTCCGAACCCTAGCCCTAGCTCCAG CCCCCTCGCGCAAACCCTAGCCTCGATTCGGAGGTCGATTCGCCGCCCCGAGGATGGGCC TGCGGCGCCTCGGCCTGATCCGCCCGCCGCGCCCGCTTCCTCCCCCCATCCCCCTCCGCC GAGCGCCCCGGTTGCCCCCGCGCAGCAGGGGGAGCCCGCCGCGCCCGCTTCCGACGACGT CTCCGCGGGGCCTAATCGGGACGGCGGGGCCGTTCCCAACGGCCATGGAGACGTCCGGGC GGCCGCCGAGGAGAAGGCGCGGAAGCGGAGGGCGCGGAGCGAGCTGCGGCGGCAGCTTGC GTCGGAGCTCGACCAGGTGCGTGGGCTTTCCAAGCGGCTGAAGGCGGCCGCTGAGGCCAT CGCGGCTGAGTCTGCAGCGGCCCTTGCTTTGCCTGTGGTGGTGCCGCCGCCTCAGCTTCC TGTTGGGTATGCGCACTCGCAGTTCGCACTCGCTGATCCTGTGACGCCCATACCTGGTCA AGTTGCTGGTGCTATTGTTCCGGTCCGCTCAGTGATGCAGCGCGGGCCACTAACCGTGTC AGTGACTCACACAGAGTCCTTCGAGAAGGAGAAGCGGACACCAAAGGCGAATCAGTTGTA TCAAAATTCAGAGTTCTTGCTTGCCAAGGATAAGTTTCCGCCTTCAGATTCACATGGTCG TAAGAAACCCAAGCACCACAAGAAGAAGCATCGTTCCTTAGCATCTCATGGTGCTGGTTA TGATGCTGAGCAGAGGCTATACTCTCATGCTTTTAAGAAATCTATGTCGCTGCTTTCTAG GCTAATGAAGCACAAATTTGGTTGGGTGTTTAACAAGCCTGTAGATGCTGTTGCGCTTGG TTTGCATGATTATTTTGCTATTATCAAGCACCCAATGGATCTTGGCACGATAAAGACCCG ACTCACGCATGGCCAGTACAGGAACCCGAGGGAGTTTGCTGATGATGTACGGCTGACGTT CCATAATGCCATGACCTATAATCCCAAGGGGCAGGATGTGCATTTCATGGCTGAGCAGTT GTTGGGAATCTTTGAGGCGCAGTGGCCCGAAATTGAGGCTGAGGTTCAGTACCTTGCCTC ATGTCCGCCATTGCCAAATAAGTTTCCACCTCCACCAATTGACGTGCGCTTCCTTGATCG GTCAGATTCTGTAAAACACCATATGGTGTTGGACTCCAAGTCAAGGCCATTAAGTCATAC TCCCACTTATAGTGCCAGGACTCCATCGATGAAGAAACCAAAGGCCAAGGATCCGGATAA GAGAGATATGACAATAGATGAGAAGCGGAAGCTTAGTAACAACCTTCAGAATTTGCCACC GGAGAAGCTTGATGTTGTTGTGCAGATCATTAAGAACAAGAATCTGTCTGTTAGACAGCA TGATGATGAGATTGAGGTTGAAATAGATAGCATGGATACTGAGACACTTTGGGAACTTGA TAGATTTGTGGCCAACTACAAGAAGAACCTGAGCAAGCAAAAGAGGAAGGCTGAGCGAGC CATGCTTGCAAGGCAGGATGCAGAGTTGCATGCACAACATGTTGCCCCACAACAACCAAG TCAAGAGCCTAATATTGGTGTAAAATCTCCAAAGCAAAATTTGATTGTGGATGAGAAATT AGCTACTTCTGTGCCAGAACAAGCTGATAATAATGGACAAAATGCAAGTAGATCGAGCAG CTCTAGCAGCTCCAGCAGTGATACAGGATCCTCTTCTAGTGACTCAGACAGTGATAGCTC CTCTTCAGATGGATCAGATGCCGCCAATTCATCTTGAAATATTCAGAACTTCATCCAATG AAGAATAACTGTCTAATTGTATTTGGCATGACAATGCCTCAGCAAGACTCAAGACATGCC TATCTTCGTCTATCTAGGAAATCTCCGAGTTGCAGCTAGGATGTCATCCGAAGGCAGGAT TCTGCAAAGGCCTGCTGAGCCTGATACAAGTTCCATTCTGCTGCTTCTGTGTACTTATGA TTGTAGGTTAACTTTGTACACTAGTCCATTTTCATTTGTTTGGCAGCAGAGTGCAGCTGT ATTATATGCACCTTGGCATTATGGATACCCCCAGCTGAAGGCAAGGTATTCACTAGGCTC AGATCCAATAAGACAGGCATGCATGCTGACGCTGATCTTATCTGGGTAGGAGTTCTGTAG CCTGTAGATTAGCCACAGCTGGAGCATTATTTACGTTTTGCCGCGTT