Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0249900-01
CDS Infomation

cds chromosome:IRGSP-1.0:2:8465066:8467035:1 gene:Os02g0249900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:GLUTELIN B1 description:Glutelin precursor. (Os02t0249900-01)
Sequence

ATGGCGAGTTCCGTTTTCTCTCGGTTTTCTATATACTTTTGTGTTCTTCTATTATGCCAT
GGTTCTATGGCCCAGCTATTTAATCCCAGCACAAACCCATGGCATAGTCCTCGGCAAGGA
AGTTTTAGGGAGTGTAGATTTGATAGACTACAAGCATTTGAACCACTTCGGAAAGTGAGG
TCAGAAGCTGGGGTGACTGAGTACTTCGATGAGAAGAATGAATTATTCCAGTGCACGGGT
ACTTTTGTGATCCGACGTGTCATTCAGCCTCAAGGCCTTTTGGTACCTCGATACACAAAT
ATTCCTGGCGTGGTCTACATCATCCAAGGGAGAGGTTCTATGGGTTTAACCTTCCCCGGT
TGCCCTGCGACTTACCAGCAACAATTCCAACAATTTTCATCTCAAGGCCAAAGTCAGAGC
CAAAAGTTTAGAGATGAGCACCAAAAGATTCATCAATTTAGGCAAGGAGACATTGTTGCA
CTCCCAGCTGGTGTTGCACATTGGTTCTACAATGATGGTGATGCACCTATTGTTGCCGTA
TATGTTTATGACGTAAACAACAACGCCAATCAGCTTGAACCTAGGCAAAAGGAGTTCCTA
TTAGCCGGCAACAACAATCGGGCTCAACAACAACAAGTATATGGTAGCTCAATTGAGCAA
CACTCTGGGCAAAACATATTCAGCGGATTTGGTGTTGAGATGCTAAGTGAGGCTTTAGGC
ATCAACGCAGTAGCAGCAAAGAGGCTACAGAGCCAAAATGATCAAAGAGGAGAGATCATA
CATGTGAAGAATGGCCTTCAATTGTTGAAACCGACTTTGACACAACAGCAAGAACAAGCA
CAAGCACAAGATCAATATCAACAAGTTCAATACAGTGAACGACAGCAAACATCTTCTCGA
TGGAACGGATTGGAGGAGAACTTTTGCACGATCAAGGTGAGAGTAAACATTGAAAATCCT
AGTCGTGCTGATTCATACAACCCACGTGCCGGAAGGATAACAAGTGTCAATAGTCAGAAG
TTCCCCATCCTTAACCTCATCCAAATGAGCGCTACCAGAGTAAACCTATACCAGAATGCT
ATTCTCTCGCCGTTCTGGAACGTCAATGCTCATAGTTTGGTCTATATGATTCAAGGGCGA
TCTCGAGTTCAAGTCGTTAGTAACTTTGGAAAGACTGTGTTTGATGGTGTCCTTCGCCCA
GGACAATTATTGATCATTCCGCAACATTATGCTGTCTTGAAGAAAGCAGAGCGTGAAGGA
TGCCAATATATCGCAATCAAGACAAACGCTAACGCCTTCGTCAGCCACCTTGCAGGGAAA
AACTCAGTATTCCGTGCCTTGCCAGTTGATGTAGTCGCTAATGCGTATCGCATCTCAAGG
GAGCAAGCCCGAAGCCTCAAGAACAACAGGGGAGAAGAGCACGGTGCCTTCACTCCTAGA
TTTCAACAACAATACTACCCAGGATTATCGAATGAGTCCGAAAGCGAGACCTCAGAGTAA

Peptide Sequence

PEP ID

Os02t0249900-01
PEP Infomation

pep chromosome:IRGSP-1.0:2:8465066:8467035:1 gene:Os02g0249900 transcript:Os02t0249900-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:GLUTELIN B1 description:Glutelin precursor. (Os02t0249900-01)
Sequence

MASSVFSRFSIYFCVLLLCHGSMAQLFNPSTNPWHSPRQGSFRECRFDRLQAFEPLRKVR
SEAGVTEYFDEKNELFQCTGTFVIRRVIQPQGLLVPRYTNIPGVVYIIQGRGSMGLTFPG
CPATYQQQFQQFSSQGQSQSQKFRDEHQKIHQFRQGDIVALPAGVAHWFYNDGDAPIVAV
YVYDVNNNANQLEPRQKEFLLAGNNNRAQQQQVYGSSIEQHSGQNIFSGFGVEMLSEALG
INAVAAKRLQSQNDQRGEIIHVKNGLQLLKPTLTQQQEQAQAQDQYQQVQYSERQQTSSR
WNGLEENFCTIKVRVNIENPSRADSYNPRAGRITSVNSQKFPILNLIQMSATRVNLYQNA
ILSPFWNVNAHSLVYMIQGRSRVQVVSNFGKTVFDGVLRPGQLLIIPQHYAVLKKAEREG
CQYIAIKTNANAFVSHLAGKNSVFRALPVDVVANAYRISREQARSLKNNRGEEHGAFTPR
FQQQYYPGLSNESESETSE

Transcript Sequence

Transcript ID

Os02t0249900-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:8465066:8467035:1 gene:Os02g0249900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:GLUTELIN B1 description:Glutelin precursor. (Os02t0249900-01)
Sequence

ACATCAATTAGCTTAAGTTTCCATAAGCAAGTACAAATAGCTATGGCGAGTTCCGTTTTC
TCTCGGTTTTCTATATACTTTTGTGTTCTTCTATTATGCCATGGTTCTATGGCCCAGCTA
TTTAATCCCAGCACAAACCCATGGCATAGTCCTCGGCAAGGAAGTTTTAGGGAGTGTAGA
TTTGATAGACTACAAGCATTTGAACCACTTCGGAAAGTGAGGTCAGAAGCTGGGGTGACT
GAGTACTTCGATGAGAAGAATGAATTATTCCAGTGCACGGGTACTTTTGTGATCCGACGT
GTCATTCAGCCTCAAGGCCTTTTGGTACCTCGATACACAAATATTCCTGGCGTGGTCTAC
ATCATCCAAGGGAGAGGTTCTATGGGTTTAACCTTCCCCGGTTGCCCTGCGACTTACCAG
CAACAATTCCAACAATTTTCATCTCAAGGCCAAAGTCAGAGCCAAAAGTTTAGAGATGAG
CACCAAAAGATTCATCAATTTAGGCAAGGAGACATTGTTGCACTCCCAGCTGGTGTTGCA
CATTGGTTCTACAATGATGGTGATGCACCTATTGTTGCCGTATATGTTTATGACGTAAAC
AACAACGCCAATCAGCTTGAACCTAGGCAAAAGGAGTTCCTATTAGCCGGCAACAACAAT
CGGGCTCAACAACAACAAGTATATGGTAGCTCAATTGAGCAACACTCTGGGCAAAACATA
TTCAGCGGATTTGGTGTTGAGATGCTAAGTGAGGCTTTAGGCATCAACGCAGTAGCAGCA
AAGAGGCTACAGAGCCAAAATGATCAAAGAGGAGAGATCATACATGTGAAGAATGGCCTT
CAATTGTTGAAACCGACTTTGACACAACAGCAAGAACAAGCACAAGCACAAGATCAATAT
CAACAAGTTCAATACAGTGAACGACAGCAAACATCTTCTCGATGGAACGGATTGGAGGAG
AACTTTTGCACGATCAAGGTGAGAGTAAACATTGAAAATCCTAGTCGTGCTGATTCATAC
AACCCACGTGCCGGAAGGATAACAAGTGTCAATAGTCAGAAGTTCCCCATCCTTAACCTC
ATCCAAATGAGCGCTACCAGAGTAAACCTATACCAGAATGCTATTCTCTCGCCGTTCTGG
AACGTCAATGCTCATAGTTTGGTCTATATGATTCAAGGGCGATCTCGAGTTCAAGTCGTT
AGTAACTTTGGAAAGACTGTGTTTGATGGTGTCCTTCGCCCAGGACAATTATTGATCATT
CCGCAACATTATGCTGTCTTGAAGAAAGCAGAGCGTGAAGGATGCCAATATATCGCAATC
AAGACAAACGCTAACGCCTTCGTCAGCCACCTTGCAGGGAAAAACTCAGTATTCCGTGCC
TTGCCAGTTGATGTAGTCGCTAATGCGTATCGCATCTCAAGGGAGCAAGCCCGAAGCCTC
AAGAACAACAGGGGAGAAGAGCACGGTGCCTTCACTCCTAGATTTCAACAACAATACTAC
CCAGGATTATCGAATGAGTCCGAAAGCGAGACCTCAGAGTAATGTAATTGAGAACTAGTA
TCGGCGTAGAGTAAAATAAAACACCACAAGTATGACACTTGGTGGTGATTCTGTTCGATA
TCAGTACTAAATAAAGGTTACAAACTTCTT