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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0249300-00
CDS Infomation

cds chromosome:IRGSP-1.0:2:8422881:8423702:1 gene:Os02g0249300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os02t0249300-00)
Sequence

ATGTCGTCGACGGCGGCGGGCGGCGCGCCGGGGCCGGCGGCGCAGCGTCATGGCGGCGGC
GGCGGTGGAGGGGGGTGCTGCAGCTCAGGCGTGACGCTGGAGCTCGTCGGCGCGTTCACG
GCGGTGTGCCTGGTGCTGTACGGGGTGATACTCTACTTCAACTACCTGTACGTGCGGTGG
AGCGGCCGCGACGGCGTGCACCGGACTTCGGGCGGCGGCGGCGGCGGAGGGCGTGGAGCG
GCGGCGAGGAAGAGGGGCGGCGGCGGCGGCCTCGACAAGGCGGCGCTGGCGGCCATTCCG
GTGTTCAGGTTCAAGGCGTCGGCGTCGGCGGCGGCGCTCGGCGGCGGCGAGGCGGAGTGC
GCGGTGTGCCTGAGCGGCATGCAGGACGGCGACGCGGTGCGCGCGCTGCCCGGGTGCGGC
CACGCCTTCCACGCCGGCTGCGTCGACGCCTGGCTCCGCGCCCACGGCACCTGCCCCGTC
TGCCGCGCGCGCCCCGCCGTGCCGCCTCCTCCGCCGGCGAAACCACCCTGCCTGAAGGCG
CCGGAGCCCGCCGCCGCCGCCGCCGGCCGGCAGCCGGTCGACCTGGAGAGCCATGTATAG

Peptide Sequence

PEP ID

Os02t0249300-00
PEP Infomation

pep chromosome:IRGSP-1.0:2:8422881:8423702:1 gene:Os02g0249300 transcript:Os02t0249300-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os02t0249300-00)
Sequence

MSSTAAGGAPGPAAQRHGGGGGGGGCCSSGVTLELVGAFTAVCLVLYGVILYFNYLYVRW
SGRDGVHRTSGGGGGGGRGAAARKRGGGGGLDKAALAAIPVFRFKASASAAALGGGEAEC
AVCLSGMQDGDAVRALPGCGHAFHAGCVDAWLRAHGTCPVCRARPAVPPPPPAKPPCLKA
PEPAAAAAGRQPVDLESHV

Transcript Sequence

Transcript ID

Os02t0249300-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:8422881:8423702:1 gene:Os02g0249300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os02t0249300-00)
Sequence

CTTTGCTTTGAGCTAAGCTTGGGCTGAGTGAGTGTGTGTGGCACATGTCGTCGACGGCGG
CGGGCGGCGCGCCGGGGCCGGCGGCGCAGCGTCATGGCGGCGGCGGCGGTGGAGGGGGGT
GCTGCAGCTCAGGCGTGACGCTGGAGCTCGTCGGCGCGTTCACGGCGGTGTGCCTGGTGC
TGTACGGGGTGATACTCTACTTCAACTACCTGTACGTGCGGTGGAGCGGCCGCGACGGCG
TGCACCGGACTTCGGGCGGCGGCGGCGGCGGAGGGCGTGGAGCGGCGGCGAGGAAGAGGG
GCGGCGGCGGCGGCCTCGACAAGGCGGCGCTGGCGGCCATTCCGGTGTTCAGGTTCAAGG
CGTCGGCGTCGGCGGCGGCGCTCGGCGGCGGCGAGGCGGAGTGCGCGGTGTGCCTGAGCG
GCATGCAGGACGGCGACGCGGTGCGCGCGCTGCCCGGGTGCGGCCACGCCTTCCACGCCG
GCTGCGTCGACGCCTGGCTCCGCGCCCACGGCACCTGCCCCGTCTGCCGCGCGCGCCCCG
CCGTGCCGCCTCCTCCGCCGGCGAAACCACCCTGCCTGAAGGCGCCGGAGCCCGCCGCCG
CCGCCGCCGGCCGGCAGCCGGTCGACCTGGAGAGCCATGTATAGCACTAAGCTAATCAAG
ACGGTTAGTTAATTTTAGCCATGTATAAAATCTAGTTAGCTCCTACTCCTACTACTACAT
GTTCCTTAATTAGTTTTTTTTTTTTTTTGCGTTCTTGAAATCAAACGCCATTTTCGTCAA
TAATCCAGCAACGCCATTGTTCCCATTGAGATGAACAATGCC