Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0249000-01
CDS Infomation

cds chromosome:IRGSP-1.0:2:8406709:8408682:-1 gene:Os02g0249000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:GLUTELIN D description:Glutelin, Seed strage protein (Os02t0249000-01)
Sequence

ATGGCAACTACTACCTCTCTATTGTCTTCCTGTCTCTGTGCTCTTCTCTTGGCTCCGCTC
TTTAGCCAAGGTGTAGATGCATGGGAAAGCCGACAAGGGGCTTCCAGGCAGTGCAGATTT
GATAGGTTACAAGCATTTGAGCCCCTAAGAAAGGTACGATCGGAAGCTGGGGACACAGAG
TACTTTGATGAGAGAAATGAGCAGTTTCGATGCGCTGGTGTCTTTGTCATTCGGCGCGTG
ATTGAGCCACAAGGCCTTGTGGTGCCTCGATACTCGAACACTCCTGCTCTAGCCTACATA
ATCCAAGGAAAAGGTTACGTAGGATTGACTTTTCCTGGTTGCCCAGCAACACACCAACAA
CAATTCCAACTATTTGAACAAAGACAGAGCGACCAAGCTCATAAGTTTAGAGATGAGCAC
CAGAAGATTCACGAATTTAGGCAAGGGGATGTTGTTGCACTTCCGGCTAGTGTTGCACAT
TGGTTCTACAATGGTGGTGATACACCGGCTGTTGTTGTCTATGTTTATGACATAAAAAGT
TTTGCTAATCAGCTTGAACCAAGGCAGAAGGAGTTTTTATTAGCTGGTAACAACCAGAGA
GGGCAACAAATATTTGAACATTCCATCTTTCAACACTCTGGACAAAATATATTTAGTGGG
TTCAATACTGAGGTACTTAGCGAGGCCCTTGGAATAAACACGGAGGCTTCCAAGAGGCTC
CAAAGTCAAAATGACCAAAGGGGAGATATCATTCGAGTGAAGCACGGGCTTCAATTGTTG
AAACCCACATTAACACAACGACAGGAAGAACATCGTCAATATCAACAAGTCCAGTATCGT
GAAGGACAATATAATGGATTGGACGAGAATTTCTGTACAATAAAGGCAAGGGTAAACATT
GAAAATCCTAGCCGCGCTGACTACTACAACCCTCGTGCTGGAAGGATAACCCTTCTTAAC
AACCAAAAGTTCCCTATTCTCAACCTTATTGGAATGGGTGCTGCAAGAGTAAACTTATAC
CAGAATGCTCTTCTCTCACCCTTCTGGAACATTAATGCCCATAGTGTAGTGTATATCATC
CAAGGAAGTGTGCGAGTACAGGTTGCCAATAATCAAGGAAGATCTGTGTTTAATGGTGTA
CTTCATCAGGGGCAACTATTAATCATACCACAAAACCATGCCGTCATTAAGAAAGCCGAG
CACAATGGGTGCCAGTATGTCGCAATAAAGACAATTTCGGACCCTACGGTGAGTTGGGTT
GCTGGAAAGAACTCCATATTACGTGCATTGCCTGTAGATGTTATTGCCAATGCTTATCGT
ATCTCGAGGGATGAAGCCCGACGTCTAAAGAATAATAGGGCAGATGAGATTGGCCCTTTT
ACTCCTCGTTTCCCCCAGAAGAGCCAGCGGGGTTACCAGTTCCTAACTGAAGGCCTCTCT
TTAATCGGCATGTAA

Peptide Sequence

PEP ID

Os02t0249000-01
PEP Infomation

pep chromosome:IRGSP-1.0:2:8406709:8408682:-1 gene:Os02g0249000 transcript:Os02t0249000-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:GLUTELIN D description:Glutelin, Seed strage protein (Os02t0249000-01)
Sequence

MATTTSLLSSCLCALLLAPLFSQGVDAWESRQGASRQCRFDRLQAFEPLRKVRSEAGDTE
YFDERNEQFRCAGVFVIRRVIEPQGLVVPRYSNTPALAYIIQGKGYVGLTFPGCPATHQQ
QFQLFEQRQSDQAHKFRDEHQKIHEFRQGDVVALPASVAHWFYNGGDTPAVVVYVYDIKS
FANQLEPRQKEFLLAGNNQRGQQIFEHSIFQHSGQNIFSGFNTEVLSEALGINTEASKRL
QSQNDQRGDIIRVKHGLQLLKPTLTQRQEEHRQYQQVQYREGQYNGLDENFCTIKARVNI
ENPSRADYYNPRAGRITLLNNQKFPILNLIGMGAARVNLYQNALLSPFWNINAHSVVYII
QGSVRVQVANNQGRSVFNGVLHQGQLLIIPQNHAVIKKAEHNGCQYVAIKTISDPTVSWV
AGKNSILRALPVDVIANAYRISRDEARRLKNNRADEIGPFTPRFPQKSQRGYQFLTEGLS
LIGM

Transcript Sequence

Transcript ID

Os02t0249000-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:8406709:8408682:-1 gene:Os02g0249000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:GLUTELIN D description:Glutelin, Seed strage protein (Os02t0249000-01)
Sequence

TCGATCAAATTTTAACTTCTCCAAATAGCTATGGCAACTACTACCTCTCTATTGTCTTCC
TGTCTCTGTGCTCTTCTCTTGGCTCCGCTCTTTAGCCAAGGTGTAGATGCATGGGAAAGC
CGACAAGGGGCTTCCAGGCAGTGCAGATTTGATAGGTTACAAGCATTTGAGCCCCTAAGA
AAGGTACGATCGGAAGCTGGGGACACAGAGTACTTTGATGAGAGAAATGAGCAGTTTCGA
TGCGCTGGTGTCTTTGTCATTCGGCGCGTGATTGAGCCACAAGGCCTTGTGGTGCCTCGA
TACTCGAACACTCCTGCTCTAGCCTACATAATCCAAGGAAAAGGTTACGTAGGATTGACT
TTTCCTGGTTGCCCAGCAACACACCAACAACAATTCCAACTATTTGAACAAAGACAGAGC
GACCAAGCTCATAAGTTTAGAGATGAGCACCAGAAGATTCACGAATTTAGGCAAGGGGAT
GTTGTTGCACTTCCGGCTAGTGTTGCACATTGGTTCTACAATGGTGGTGATACACCGGCT
GTTGTTGTCTATGTTTATGACATAAAAAGTTTTGCTAATCAGCTTGAACCAAGGCAGAAG
GAGTTTTTATTAGCTGGTAACAACCAGAGAGGGCAACAAATATTTGAACATTCCATCTTT
CAACACTCTGGACAAAATATATTTAGTGGGTTCAATACTGAGGTACTTAGCGAGGCCCTT
GGAATAAACACGGAGGCTTCCAAGAGGCTCCAAAGTCAAAATGACCAAAGGGGAGATATC
ATTCGAGTGAAGCACGGGCTTCAATTGTTGAAACCCACATTAACACAACGACAGGAAGAA
CATCGTCAATATCAACAAGTCCAGTATCGTGAAGGACAATATAATGGATTGGACGAGAAT
TTCTGTACAATAAAGGCAAGGGTAAACATTGAAAATCCTAGCCGCGCTGACTACTACAAC
CCTCGTGCTGGAAGGATAACCCTTCTTAACAACCAAAAGTTCCCTATTCTCAACCTTATT
GGAATGGGTGCTGCAAGAGTAAACTTATACCAGAATGCTCTTCTCTCACCCTTCTGGAAC
ATTAATGCCCATAGTGTAGTGTATATCATCCAAGGAAGTGTGCGAGTACAGGTTGCCAAT
AATCAAGGAAGATCTGTGTTTAATGGTGTACTTCATCAGGGGCAACTATTAATCATACCA
CAAAACCATGCCGTCATTAAGAAAGCCGAGCACAATGGGTGCCAGTATGTCGCAATAAAG
ACAATTTCGGACCCTACGGTGAGTTGGGTTGCTGGAAAGAACTCCATATTACGTGCATTG
CCTGTAGATGTTATTGCCAATGCTTATCGTATCTCGAGGGATGAAGCCCGACGTCTAAAG
AATAATAGGGCAGATGAGATTGGCCCTTTTACTCCTCGTTTCCCCCAGAAGAGCCAGCGG
GGTTACCAGTTCCTAACTGAAGGCCTCTCTTTAATCGGCATGTAAAACTTATAGATTATG
AGTACTATGCAAGCAAAAATAATAAAGCACATCAAGCTTGTTGTGGATGCTTTGCAATAG
TTTTATGTACTTTGTTTTGCAAAGAACAAAATTAAAACAAAACTGAGTTCATG