Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0247200-01
CDS Infomation	cds chromosome:IRGSP-1.0:2:8326165:8343175:-1 gene:Os02g0247200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to T-complex protein 1, gamma subunit (TCP-1-gamma) (CCT-gamma) (Matricin) (mTRiC-P5). (Os02t0247200-01)
Sequence	ATGGCATTGCACGCGCCGGTGCTCGTGCTCAAGGATTCTTTGAAGCGGGAGTCTGGCACC AAGGTGCATCATGCCAACATCCAGGCAGCCAAGGCTGTGGCGGATATCATACGCACAACA TTGGGCCCTCAGTCAATGTTGAAGATGCTTCTTGATGCTGCAGGAGGTATTGTTGTAACT AATGATGGCAATTGTATATTGCGGGAGCTAGACCTTGCACACCCAGCTGCAAAGTCTATG ATTGAGCTAAGCCGCACACAGGATGAAGAAGTAGGAGATGGCACGACATCTGTTATTGTT CTTGCTGGTGAAATGCTCCATGTTGCGCAAGCATTCATCGACAAGAACTACCATCCCACC GTTATTTGTAGAGCATACACCAAAGCTCTTGACGATGCTCTATCTGTTCTTGATAAGATT GCTATTCCTGTTGACGTGGACGACCGTGTTGCAATGCTTGGTCTGGTGAAGAGTTCCATC GGTACAAAATTTACTGGTCAGTTTGGTGACCTTATTGCGGATCTTGCTATCGATGCTACC ACAACAGCTGGTGTTGACCTGGGTCAAGGCATTCGTGAAGTTGATATCAAGAAGTACATC AAAGTAGAGAAGGTTCCTGGAGGCCAGCTGGAAGATTCCAAGGTTCTTAAAGGAGTTATG ATCAATAAAGATGTTGTTGCTCCTGGGAAAATGAGAAGAAAAATAGTTAACCCACGCATC ATTCTCCTGGATTGCCCTCTTGAATACAAGAAAGGAGAAAACCAGACCAATGCTGAGTTG ATGAAAGAAGAAGATTGGCAGGTGATGCTACAGATGGAAGAGGAATATATAGAGAACCTG TGTGCACAGATTCTGAAATTCAAGCCTGATTTGGTTATAACAGAGAAAGGGTTGAGTGAC CTAGCAGTCCATTATTTAGGAAAGGCTGGTGTAAGTGCAATTCGAAGGCTCAGGAAGACG GACAACAACAGGATCGCAAAGGCTTGTGGAGCAGTTATAGTGAATAGGCCAGAGGAACTT CAAGAATCTGATGTAGGAACAGGAGCTGGCCTCTTTGAGGTCAAGAAGTTTGGTGATGAG TTCTTTGCCTTCATTGTTGACTGCAAAGATCCCAAAGCATGTACTGTTTTGTTGAGGGGA GCAAGCAAGGATGTCTTGAATGAGGTTGAGAGGAACTTGCAGGATGCTATGTCTATGGCA AGGAACATTTGGAAAAACCCTAAACTGCTACCTGGAGGTGGTGCTACTGAATTAACTGTA TCTGCAACATTGAAACAAAAGAGTTCTTCAGTTGAAGGTGTAGAGAAGTGGCCCTATGAA GCTGCCGCATTAGCATTTGAGGCAATTCCAAGAACTCTTTTACAGAATTGTGGCCTGAAC GTTATTAGGACAATGACACAACTTCAGGGAAAGCATGCAAATGGTGAAAATGCTTGGGTT GGCATTGATGGAAGCAGTGGTGATATTGTGGATATGAAAGAGCGGAAGATCTGGGACTCG TACAGTGTCAAGGCGCAGACATTCAAGACAGCTATTGAGGCTGCCTGCATGCTCCTGAGG ATCGATGATATTGTCAGTGGCATCAAGAAGAAGCAAGCTCCTGGAGCCAGTTCAGCTCCA AAGCAACCTCAAATAGAACAAGAGGGTGATGCAGACAATGAACAGATGATCCCAGAGTAG

Peptide Sequence

PEP ID	Os02t0247200-01
PEP Infomation	pep chromosome:IRGSP-1.0:2:8326165:8343175:-1 gene:Os02g0247200 transcript:Os02t0247200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to T-complex protein 1, gamma subunit (TCP-1-gamma) (CCT-gamma) (Matricin) (mTRiC-P5). (Os02t0247200-01)
Sequence	MALHAPVLVLKDSLKRESGTKVHHANIQAAKAVADIIRTTLGPQSMLKMLLDAAGGIVVT NDGNCILRELDLAHPAAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVAQAFIDKNYHPT VICRAYTKALDDALSVLDKIAIPVDVDDRVAMLGLVKSSIGTKFTGQFGDLIADLAIDAT TTAGVDLGQGIREVDIKKYIKVEKVPGGQLEDSKVLKGVMINKDVVAPGKMRRKIVNPRI ILLDCPLEYKKGENQTNAELMKEEDWQVMLQMEEEYIENLCAQILKFKPDLVITEKGLSD LAVHYLGKAGVSAIRRLRKTDNNRIAKACGAVIVNRPEELQESDVGTGAGLFEVKKFGDE FFAFIVDCKDPKACTVLLRGASKDVLNEVERNLQDAMSMARNIWKNPKLLPGGGATELTV SATLKQKSSSVEGVEKWPYEAAALAFEAIPRTLLQNCGLNVIRTMTQLQGKHANGENAWV GIDGSSGDIVDMKERKIWDSYSVKAQTFKTAIEAACMLLRIDDIVSGIKKKQAPGASSAP KQPQIEQEGDADNEQMIPE

Transcript Sequence

Transcript ID	Os02t0247200-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:8326165:8343175:-1 gene:Os02g0247200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to T-complex protein 1, gamma subunit (TCP-1-gamma) (CCT-gamma) (Matricin) (mTRiC-P5). (Os02t0247200-01)
Sequence	GCGCGAACCAACCCCCGCCGCCGCCACCGCCACCGCCGCCGCCGCCGCATCCTCCTCCTC GCGCCTCTCGCTATCCATGGCATTGCACGCGCCGGTGCTCGTGCTCAAGGATTCTTTGAA GCGGGAGTCTGGCACCAAGGTGCATCATGCCAACATCCAGGCAGCCAAGGCTGTGGCGGA TATCATACGCACAACATTGGGCCCTCAGTCAATGTTGAAGATGCTTCTTGATGCTGCAGG AGGTATTGTTGTAACTAATGATGGCAATTGTATATTGCGGGAGCTAGACCTTGCACACCC AGCTGCAAAGTCTATGATTGAGCTAAGCCGCACACAGGATGAAGAAGTAGGAGATGGCAC GACATCTGTTATTGTTCTTGCTGGTGAAATGCTCCATGTTGCGCAAGCATTCATCGACAA GAACTACCATCCCACCGTTATTTGTAGAGCATACACCAAAGCTCTTGACGATGCTCTATC TGTTCTTGATAAGATTGCTATTCCTGTTGACGTGGACGACCGTGTTGCAATGCTTGGTCT GGTGAAGAGTTCCATCGGTACAAAATTTACTGGTCAGTTTGGTGACCTTATTGCGGATCT TGCTATCGATGCTACCACAACAGCTGGTGTTGACCTGGGTCAAGGCATTCGTGAAGTTGA TATCAAGAAGTACATCAAAGTAGAGAAGGTTCCTGGAGGCCAGCTGGAAGATTCCAAGGT TCTTAAAGGAGTTATGATCAATAAAGATGTTGTTGCTCCTGGGAAAATGAGAAGAAAAAT AGTTAACCCACGCATCATTCTCCTGGATTGCCCTCTTGAATACAAGAAAGGAGAAAACCA GACCAATGCTGAGTTGATGAAAGAAGAAGATTGGCAGGTGATGCTACAGATGGAAGAGGA ATATATAGAGAACCTGTGTGCACAGATTCTGAAATTCAAGCCTGATTTGGTTATAACAGA GAAAGGGTTGAGTGACCTAGCAGTCCATTATTTAGGAAAGGCTGGTGTAAGTGCAATTCG AAGGCTCAGGAAGACGGACAACAACAGGATCGCAAAGGCTTGTGGAGCAGTTATAGTGAA TAGGCCAGAGGAACTTCAAGAATCTGATGTAGGAACAGGAGCTGGCCTCTTTGAGGTCAA GAAGTTTGGTGATGAGTTCTTTGCCTTCATTGTTGACTGCAAAGATCCCAAAGCATGTAC TGTTTTGTTGAGGGGAGCAAGCAAGGATGTCTTGAATGAGGTTGAGAGGAACTTGCAGGA TGCTATGTCTATGGCAAGGAACATTTGGAAAAACCCTAAACTGCTACCTGGAGGTGGTGC TACTGAATTAACTGTATCTGCAACATTGAAACAAAAGAGTTCTTCAGTTGAAGGTGTAGA GAAGTGGCCCTATGAAGCTGCCGCATTAGCATTTGAGGCAATTCCAAGAACTCTTTTACA GAATTGTGGCCTGAACGTTATTAGGACAATGACACAACTTCAGGGAAAGCATGCAAATGG TGAAAATGCTTGGGTTGGCATTGATGGAAGCAGTGGTGATATTGTGGATATGAAAGAGCG GAAGATCTGGGACTCGTACAGTGTCAAGGCGCAGACATTCAAGACAGCTATTGAGGCTGC CTGCATGCTCCTGAGGATCGATGATATTGTCAGTGGCATCAAGAAGAAGCAAGCTCCTGG AGCCAGTTCAGCTCCAAAGCAACCTCAAATAGAACAAGAGGGTGATGCAGACAATGAACA GATGATCCCAGAGTAGAATGTCACATGAATGCATCAATCACACTTAACCTAACATATAAA TCAGTCTGTTGAAATTCTTTAAATTTTTGTGGTAGCCTTTATAATCATTTCCCAACACAA CTTTTGTATCTGTCAGTTTGTATGGCTGTTAGCCATCCATGTTTATGTTGGTCACATAGT TGAGTACTC