Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0244600-01
CDS Infomation

cds chromosome:IRGSP-1.0:2:8164661:8169145:1 gene:Os02g0244600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Nucleotide-binding, alpha-beta plait domain containing protein. (Os02t0244600-01)
Sequence

ATGGTGGCCATCGAGGCGGCGGCGGCGGCGGCGGCGGCGGAGAGGGGCCCGATCCGGGCG
GTGGCGGAGGCGGAGGCGGAGGCGGAGGCGAAGGTGGTGGATGTGGAGGGGAAGGAGGAG
GAGGAGGAGGCGGCCAAGGTGGAGGAGGAGGAGGAGGAGGAGAGGGAGTACAAGAGCGAC
ATGAGGAAGCTGGAGGAGCTCATGTCCAAGCTGAACCCGCGCGCGCAGGAGTTCGTGCCA
TCGTCGCGCCGCGCGCCGCCGGCGGCGGCGGCGCAGGCGGCGGGCGGGCTGTCCGCCGAC
GCGCCGGTGTTCGTCTCCGCCGCCGAGTACTTCGGCGGGGCCGGCGCCGGAGCCGGGCAG
CTGCAGGTGGGCGGCGGCGGCGGGAGGGACTCCAGCAGCGACGGATCCAGCAACGGCGGC
GGGCAGCCGCAGAATCGCCGGAGAAGGAGTGGATTCAACCAGGGAAGGAGGAGGACGGGA
GGCCGGACACGACGCGCCGATAGGGAGGATAGTGTGCGGAGGACCGTCTATGTCTCTGAC
ATTGATCAGCAAGTGACTGAACAGAAGCTTGCCGAAGTGTTTTCTAACTGTGGACAAGTG
GTAGATTGCCGTATCTGTGGTGATCCACACTCAGTCTTGCGTTTTGCTTTCATTGAATTT
GCTGATGATGCCGGTGCAAGGGCCGCACTAACACTAGGAGGAACCATGCTTGGTTACTAC
CCTGTTAGAGTTTTGCCTTCCAAAACAGCTATTCTGCCTGTGAATCCTAAATTTCTTCCT
CGGACGGAAGATGAAAAAGAGATGGTCTCAAGGACTGTATATTGTACTAACATAGATAAG
AAGGTTACAGAAGAAGATGTAAAGATTTTCTTTCAGCAGCTTTGTGGGAAGGTTTCTCGG
CTGAGGCTCCTTGGTGATTATGTGCACTCGACGTGCATTGCATTTGTTGAGTTTGCTCAA
GCAGAAAGCGCCATTCTAGCCCTGAACTATAGTGGAATGGTTCTTGGCACACTTCCTATC
AGGGTGAGCCCTTCCAAGACACCCGTGCGTCCGCGGTCGCCTCGCGTGATGTCAAACTGA

Peptide Sequence

PEP ID

Os02t0244600-01
PEP Infomation

pep chromosome:IRGSP-1.0:2:8164661:8169145:1 gene:Os02g0244600 transcript:Os02t0244600-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Nucleotide-binding, alpha-beta plait domain containing protein. (Os02t0244600-01)
Sequence

MVAIEAAAAAAAAERGPIRAVAEAEAEAEAKVVDVEGKEEEEEAAKVEEEEEEEREYKSD
MRKLEELMSKLNPRAQEFVPSSRRAPPAAAAQAAGGLSADAPVFVSAAEYFGGAGAGAGQ
LQVGGGGGRDSSSDGSSNGGGQPQNRRRRSGFNQGRRRTGGRTRRADREDSVRRTVYVSD
IDQQVTEQKLAEVFSNCGQVVDCRICGDPHSVLRFAFIEFADDAGARAALTLGGTMLGYY
PVRVLPSKTAILPVNPKFLPRTEDEKEMVSRTVYCTNIDKKVTEEDVKIFFQQLCGKVSR
LRLLGDYVHSTCIAFVEFAQAESAILALNYSGMVLGTLPIRVSPSKTPVRPRSPRVMSN

Transcript Sequence

Transcript ID

Os02t0244600-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:8164661:8169145:1 gene:Os02g0244600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Nucleotide-binding, alpha-beta plait domain containing protein. (Os02t0244600-01)
Sequence

TTCACTGTTTCTCCTTCACCATTCGCCTCCTCCTCCTCTCGAGGGAGAGAAGAAAAAAGC
TAACGCCGCCGCAAGAATCCAAGAAGGAGAAGAGAGAGAATTTGATCTCTTCCTCTCCTT
CCCCGAGGCTCTGAGGCGAGGTAGGTTGTCGCGGGATCAATAATGGTGGCCATCGAGGCG
GCGGCGGCGGCGGCGGCGGCGGAGAGGGGCCCGATCCGGGCGGTGGCGGAGGCGGAGGCG
GAGGCGGAGGCGAAGGTGGTGGATGTGGAGGGGAAGGAGGAGGAGGAGGAGGCGGCCAAG
GTGGAGGAGGAGGAGGAGGAGGAGAGGGAGTACAAGAGCGACATGAGGAAGCTGGAGGAG
CTCATGTCCAAGCTGAACCCGCGCGCGCAGGAGTTCGTGCCATCGTCGCGCCGCGCGCCG
CCGGCGGCGGCGGCGCAGGCGGCGGGCGGGCTGTCCGCCGACGCGCCGGTGTTCGTCTCC
GCCGCCGAGTACTTCGGCGGGGCCGGCGCCGGAGCCGGGCAGCTGCAGGTGGGCGGCGGC
GGCGGGAGGGACTCCAGCAGCGACGGATCCAGCAACGGCGGCGGGCAGCCGCAGAATCGC
CGGAGAAGGAGTGGATTCAACCAGGGAAGGAGGAGGACGGGAGGCCGGACACGACGCGCC
GATAGGGAGGATAGTGTGCGGAGGACCGTCTATGTCTCTGACATTGATCAGCAAGTGACT
GAACAGAAGCTTGCCGAAGTGTTTTCTAACTGTGGACAAGTGGTAGATTGCCGTATCTGT
GGTGATCCACACTCAGTCTTGCGTTTTGCTTTCATTGAATTTGCTGATGATGCCGGTGCA
AGGGCCGCACTAACACTAGGAGGAACCATGCTTGGTTACTACCCTGTTAGAGTTTTGCCT
TCCAAAACAGCTATTCTGCCTGTGAATCCTAAATTTCTTCCTCGGACGGAAGATGAAAAA
GAGATGGTCTCAAGGACTGTATATTGTACTAACATAGATAAGAAGGTTACAGAAGAAGAT
GTAAAGATTTTCTTTCAGCAGCTTTGTGGGAAGGTTTCTCGGCTGAGGCTCCTTGGTGAT
TATGTGCACTCGACGTGCATTGCATTTGTTGAGTTTGCTCAAGCAGAAAGCGCCATTCTA
GCCCTGAACTATAGTGGAATGGTTCTTGGCACACTTCCTATCAGGGTGAGCCCTTCCAAG
ACACCCGTGCGTCCGCGGTCGCCTCGCGTGATGTCAAACTGAGTCCGGGTTGTTCCTGAA
GCTTGAGGCTGTCACCAATGGCAGGCAGAGCTTGAAACTCTAGTCATGGCGTTTAGAAAT
GCTGTCGCTTCGCGGAATCGGTAACTGCCGTTTCTGAGAGTATCATCTCATCATCTCTTA
GGTCCAAGTAGAAGGCCGACCTGCTGATGTTCGTCTGTTCAGAGACCCATCTGTAGGTTG
GGAGAGGCTACATTTTCGTTTCTTTTGTTCAGTATGCTATGTTCAGTATCCTATAACAGC
CTTTGCAGGCAATTCCGACAATAATATCTACGTATTTTCTGTCTCATTCACACTGTTCAT
GTGAATATGTGATAGTTGAAATTCCATATCTGACGGTGAACTTAGGGTTTTATTTTTCAT
TACTAGTGAAATTGAAATGATTAATGTGAAAATTCCTC