Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0235900-01
CDS Infomation

cds chromosome:IRGSP-1.0:2:7690242:7692086:1 gene:Os02g0235900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Oxygen oxidoreductase covalent FAD-binding site domain containing protein. (Os02t0235900-01)
Sequence

ATGGAGCCAAGCCGCCCGCGCCTCCCTCTCCTCCTCCTCCTCCTCCTCCACTTCTCGCTG
CTCGCCTCGCCGTGTTCCGCGCGGTGGCGAGACGGCTGCGGCGTTGGCGATCTGCGCGAG
AGCTTCCTCCGGTGCGTCGCGCGGCGGTCGCCGGCGACCGCCGCCGACCCGTCGCGGCTC
GTGCACGCGCCGGGCGACGCCTCCTACCCGTCGCTGCTCGACTCCACCATCCAGAACCTC
CGCTTCGCCTCGCCGCGGACGCCCCGCCCGGCGCTGGTGCTCACGCCCGTGACCGCCGAC
GAGGTGCGCGCCTGCGTCGTCTGCTGCCGCGCCCACGGCCTCACCGTCCGCGCGCGCAGC
GGCGGGCACGACTACGAGGGCCTCTCGTACCGCTCGCTCGGCCGGTCCCCGAGGTTCGCC
GTCGTCGACGTCGCGGCGCTCCGGGCGGTGCGGGTGGACGCGGCGAGGGGCGTGGCGCGC
GCCGAGGCGGGGGCCACGCTCGGGGAGCTCTACTACGCGGTGGCGGAGGGGAGCGGCGGG
CGGCTCGGGTTCCCCGCCGGAATCTGCCCGACGGTCTGCGTCGGCGGGCACCTCAGCGGC
GGCGGGTTCGGCCCGATGATGCGCAAGTACGGCCTCGCCGCCGACAACGTGGTGGACGCG
GAGGTGGTGGACGCCGAGGGGAGGCTCCTGGACAGGGCGGCCATGGGGGAGGGCCTCTTC
TGGGCGATCAGGGGCGGCGGCGGCGGCAGCGTCGGCATCGTCGTCTCCTGGACCGTCAAC
CTCGTCCCCGTCCCGGCCGTCGTCTCCGCCTTCACCGTCCACCGCCTCCTACTCCGGCGA
GGTGGCCACGACGAGCAATCTCTCCTCCGCCTCCTCACCAAATGGCAAGCCGTGGCGCAC
GCTCTCCCCGACAACCTGTTCGTCAAAATGTCCATGGAGGCCAAGACCATCAACGACGGC
GACGACTCAACTCGTCATCCATTGGTGACGTTCAAATCATTGTTTCTTGGAAATTGCAGC
GACATGATCACCCAAATCGACCACCATTTGCCCGAACTCGGCATCAAACCAACCGATTGC
AGGGAGATGAACTGGCTGCAATCCATGCTGTACTCCTACGGCTACACCAATGGCCAACCA
GCAGAGGTGCTTCTTGACAGGACACTGCAACCCAAGGACTACTACAAGATCAAGCTCGAC
TACCTAACCTCACCAATTCCGACACCCGGCCTGATCGAATTGCTCACCAAGATCGTCGAA
GACGAAGACGGCTCCATCGACATTGACCCACAAGGCGGCGAGATGAGCCGGATACCGGAA
TCCGGCACGCCGTACGCTCACCGGAGCGGATACCTCTACAACCTGCAATACTTTGTCAAG
TGGGGAGGTGACAAGAATGTGTCCTATGAGGATGATCATCTGAGCTGGGTGAGGGGGTTG
CATGAGCTGATGACACCCTATGTGAGCAAGAACCCCAGGGCTGCATACATCAACTACAGG
GACCTGGATTTGGGGCAGAATGTGGAGGGAAACACAAGCTATGAGGAGGCCAGGGTGTGG
GGGGAGAAGTACTTCAGGGGAAACTTCAGGAGGCTGGCAATGGTGAAGGGTGAGGTGGAT
CCTGATCAGCTGTTCTGGAGTGAGCAGAGCATCCCTCCTCTGGTTGTGAGCACAAGGGAT
GCTGGATTGGTTTCAGATAGCTGA

Peptide Sequence

PEP ID

Os02t0235900-01
PEP Infomation

pep chromosome:IRGSP-1.0:2:7690242:7692086:1 gene:Os02g0235900 transcript:Os02t0235900-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Oxygen oxidoreductase covalent FAD-binding site domain containing protein. (Os02t0235900-01)
Sequence

MEPSRPRLPLLLLLLLHFSLLASPCSARWRDGCGVGDLRESFLRCVARRSPATAADPSRL
VHAPGDASYPSLLDSTIQNLRFASPRTPRPALVLTPVTADEVRACVVCCRAHGLTVRARS
GGHDYEGLSYRSLGRSPRFAVVDVAALRAVRVDAARGVARAEAGATLGELYYAVAEGSGG
RLGFPAGICPTVCVGGHLSGGGFGPMMRKYGLAADNVVDAEVVDAEGRLLDRAAMGEGLF
WAIRGGGGGSVGIVVSWTVNLVPVPAVVSAFTVHRLLLRRGGHDEQSLLRLLTKWQAVAH
ALPDNLFVKMSMEAKTINDGDDSTRHPLVTFKSLFLGNCSDMITQIDHHLPELGIKPTDC
REMNWLQSMLYSYGYTNGQPAEVLLDRTLQPKDYYKIKLDYLTSPIPTPGLIELLTKIVE
DEDGSIDIDPQGGEMSRIPESGTPYAHRSGYLYNLQYFVKWGGDKNVSYEDDHLSWVRGL
HELMTPYVSKNPRAAYINYRDLDLGQNVEGNTSYEEARVWGEKYFRGNFRRLAMVKGEVD
PDQLFWSEQSIPPLVVSTRDAGLVSDS

Transcript Sequence

Transcript ID

Os02t0235900-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:7690242:7692086:1 gene:Os02g0235900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Oxygen oxidoreductase covalent FAD-binding site domain containing protein. (Os02t0235900-01)
Sequence

GTTCGACGCAGTGGGAGCGGAGCTGAGCAAAGCTCCGGCCGCGACCTCGAGCAAGACGAC
GATGGAGCCAAGCCGCCCGCGCCTCCCTCTCCTCCTCCTCCTCCTCCTCCACTTCTCGCT
GCTCGCCTCGCCGTGTTCCGCGCGGTGGCGAGACGGCTGCGGCGTTGGCGATCTGCGCGA
GAGCTTCCTCCGGTGCGTCGCGCGGCGGTCGCCGGCGACCGCCGCCGACCCGTCGCGGCT
CGTGCACGCGCCGGGCGACGCCTCCTACCCGTCGCTGCTCGACTCCACCATCCAGAACCT
CCGCTTCGCCTCGCCGCGGACGCCCCGCCCGGCGCTGGTGCTCACGCCCGTGACCGCCGA
CGAGGTGCGCGCCTGCGTCGTCTGCTGCCGCGCCCACGGCCTCACCGTCCGCGCGCGCAG
CGGCGGGCACGACTACGAGGGCCTCTCGTACCGCTCGCTCGGCCGGTCCCCGAGGTTCGC
CGTCGTCGACGTCGCGGCGCTCCGGGCGGTGCGGGTGGACGCGGCGAGGGGCGTGGCGCG
CGCCGAGGCGGGGGCCACGCTCGGGGAGCTCTACTACGCGGTGGCGGAGGGGAGCGGCGG
GCGGCTCGGGTTCCCCGCCGGAATCTGCCCGACGGTCTGCGTCGGCGGGCACCTCAGCGG
CGGCGGGTTCGGCCCGATGATGCGCAAGTACGGCCTCGCCGCCGACAACGTGGTGGACGC
GGAGGTGGTGGACGCCGAGGGGAGGCTCCTGGACAGGGCGGCCATGGGGGAGGGCCTCTT
CTGGGCGATCAGGGGCGGCGGCGGCGGCAGCGTCGGCATCGTCGTCTCCTGGACCGTCAA
CCTCGTCCCCGTCCCGGCCGTCGTCTCCGCCTTCACCGTCCACCGCCTCCTACTCCGGCG
AGGTGGCCACGACGAGCAATCTCTCCTCCGCCTCCTCACCAAATGGCAAGCCGTGGCGCA
CGCTCTCCCCGACAACCTGTTCGTCAAAATGTCCATGGAGGCCAAGACCATCAACGACGG
CGACGACTCAACTCGTCATCCATTGGTGACGTTCAAATCATTGTTTCTTGGAAATTGCAG
CGACATGATCACCCAAATCGACCACCATTTGCCCGAACTCGGCATCAAACCAACCGATTG
CAGGGAGATGAACTGGCTGCAATCCATGCTGTACTCCTACGGCTACACCAATGGCCAACC
AGCAGAGGTGCTTCTTGACAGGACACTGCAACCCAAGGACTACTACAAGATCAAGCTCGA
CTACCTAACCTCACCAATTCCGACACCCGGCCTGATCGAATTGCTCACCAAGATCGTCGA
AGACGAAGACGGCTCCATCGACATTGACCCACAAGGCGGCGAGATGAGCCGGATACCGGA
ATCCGGCACGCCGTACGCTCACCGGAGCGGATACCTCTACAACCTGCAATACTTTGTCAA
GTGGGGAGGTGACAAGAATGTGTCCTATGAGGATGATCATCTGAGCTGGGTGAGGGGGTT
GCATGAGCTGATGACACCCTATGTGAGCAAGAACCCCAGGGCTGCATACATCAACTACAG
GGACCTGGATTTGGGGCAGAATGTGGAGGGAAACACAAGCTATGAGGAGGCCAGGGTGTG
GGGGGAGAAGTACTTCAGGGGAAACTTCAGGAGGCTGGCAATGGTGAAGGGTGAGGTGGA
TCCTGATCAGCTGTTCTGGAGTGAGCAGAGCATCCCTCCTCTGGTTGTGAGCACAAGGGA
TGCTGGATTGGTTTCAGATAGCTGATGATGGTTCAGTCTGCAGCTTGATGTATAGTAAGA
ATCTGTGCCTTTTCTTCAGCATATATTTCTCCAATAATGTGTGCT