Gene sequences

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SNP Detection
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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0234300-01
CDS Infomation	cds chromosome:IRGSP-1.0:2:7613261:7615346:1 gene:Os02g0234300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:plant U-box-containing protein 4, U-box protein 4 description:Armadillo-like helical domain containing protein. (Os02t0234300-01)
Sequence	CTCGACGTCCTCCCGGCGGCATCACTCCGCCTCTCGCACGACGCCACCGGCCTGCTCGAC CTCCTCCGCGCCCACTGCCGCTGCCGCGCGCCCGCGCAATACCATGACCCCGACGAGGCG GCGCTCCGGGAACGCCTCATGGATGCGCTCCGCCAGTTCGACCTCGGCCAGCCACCTGAC CACCCCTCGCTCCAATCGCTCCTCGCCGACATGGGCATCTCCACCGCGGCTTCTTGCCGC GCAGAAATCGATTACCTGGAGGAGCAAATCTTGAGCCAAGAAGAGGACACCGACCTGCCG CTCGTCGGCAGCGTCCTCGCCTTGCTCCGCTACTGCCTATTCGCCGTGTTCGACCCTAGC AACGCGAAGGCGCTCCGGGATTGGCCGTTGTCGGGCAACAGGCAGCGGCTTCTCTCGATT GGCGGCGGCGATGACACCTCCTTCTCGGTGCCAAAGGAGTTCTCATGCCCAATTTCTCTG GATTTGATGCGTGATCCCGTGGTGGCGTCCACCGGGCAGACGTATGACCGGCCGTCGATC ATACAGTGGATCGAGGAGGGCCATTCCACCTGCCCCAACTCCGGCCAAACCCTTGCAGAT CACCGGCTTGTGCCGAACCGTGCTCTCCGCAGCTTGATTTCACAGTGGTGTGGGGTGTAT GGCTTGCAGTATGATTCGCCCGAGAGCAACGAGGGGATGGCGGAATGTGTTGCTGCATCT TGCAGTAGTCGGGCTGCAATGGAGGCAAACAAGGCCACAGCTAGGATTTTGGTCAGGATG CTGGAGGACGGGTCAGAAAATGTAAAGGCAGTCGCTGCTAAGGAAATTCGGTTGCTGGCA AAGACCGGGAAGCAAAACCGGGCTTTCATCGCCGACTTGGGTGCGATTCCGCTGCTTTGC AGGTTGCTCTTGTCGAATGATTGGATGGCACAAGAGAATGCAGTGACAGCGCTGCTCAAT TTGTCAATCTTCGAGCCAAACAAGGGACGGATTATGGAACAGGAAGGCTGCTTGCGGCTT ATCGTCGGTGTTCTACAGAATGGATGGACTACGGAAGCGAAGGAGAATGCTGCGGCCACT CTGTTTAGTCTATCAGTGGTCCATAATTTCAAAAAACTGATCATGAATGAGCCTGGGGCT GTTGAGGAGCTGGCTAGTATGCTGACCAAGGGGACATCAAGGGGGAAGAAAGATGCGGTG ATGGCACTCTTCAACCTCTCAACACATCCAGAAAGCTCAGCTCGGATGCTCGAGTCATGC GCAGTTGTAGCTTTAATTCAGTCGCTGAGGAATGACACCGTGTCGGAGGAAGCTGCTGGT GCTTTGGCCCTGCTGATGAAGCAACCATCCATCGTGCATCTTGTTGGGAGCTCTGAAACT GTGATCACTAGCCTTGTTGGGTTAATGCGGCGGGGAACTCCAAAAGGTAAGGAAAATGCA GTCTCAGCTTTATATGAGATTTGTCGTCGGGGCGGCTCTGCTTTGGTGCAGAGAGTAGCA AAGATTCCAGGGTTGAACACAGTAATACAGACCATCACCCTCAACGGAACAAAGCGCGCC AAGAAGAAAGCAAGCCTGATTGTCAAGATGTGCCAGAGAAGCCAAATGCCATCAGCAATG GCACTAGGGAGCACATTGACAGTCGTTGATCGTTCATTGGTAGGGAACAACACATTAAGG CGTGCTGCGAGCTTTGGCAGTGGAGAATTGTCAAACCCGATTTCGATATCAGTGCAGGTG CCCTAG

Peptide Sequence

PEP ID	Os02t0234300-01
PEP Infomation	pep chromosome:IRGSP-1.0:2:7613261:7615346:1 gene:Os02g0234300 transcript:Os02t0234300-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:plant U-box-containing protein 4, U-box protein 4 description:Armadillo-like helical domain containing protein. (Os02t0234300-01)
Sequence	LDVLPAASLRLSHDATGLLDLLRAHCRCRAPAQYHDPDEAALRERLMDALRQFDLGQPPD HPSLQSLLADMGISTAASCRAEIDYLEEQILSQEEDTDLPLVGSVLALLRYCLFAVFDPS NAKALRDWPLSGNRQRLLSIGGGDDTSFSVPKEFSCPISLDLMRDPVVASTGQTYDRPSI IQWIEEGHSTCPNSGQTLADHRLVPNRALRSLISQWCGVYGLQYDSPESNEGMAECVAAS CSSRAAMEANKATARILVRMLEDGSENVKAVAAKEIRLLAKTGKQNRAFIADLGAIPLLC RLLLSNDWMAQENAVTALLNLSIFEPNKGRIMEQEGCLRLIVGVLQNGWTTEAKENAAAT LFSLSVVHNFKKLIMNEPGAVEELASMLTKGTSRGKKDAVMALFNLSTHPESSARMLESC AVVALIQSLRNDTVSEEAAGALALLMKQPSIVHLVGSSETVITSLVGLMRRGTPKGKENA VSALYEICRRGGSALVQRVAKIPGLNTVIQTITLNGTKRAKKKASLIVKMCQRSQMPSAM ALGSTLTVVDRSLVGNNTLRRAASFGSGELSNPISISVQVP

Transcript Sequence

Transcript ID	Os02t0234300-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:7613261:7615346:1 gene:Os02g0234300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:plant U-box-containing protein 4, U-box protein 4 description:Armadillo-like helical domain containing protein. (Os02t0234300-01)
Sequence	TCCTCGACGTCCTCCCGGCGGCATCACTCCGCCTCTCGCACGACGCCACCGGCCTGCTCG ACCTCCTCCGCGCCCACTGCCGCTGCCGCGCGCCCGCGCAATACCATGACCCCGACGAGG CGGCGCTCCGGGAACGCCTCATGGATGCGCTCCGCCAGTTCGACCTCGGCCAGCCACCTG ACCACCCCTCGCTCCAATCGCTCCTCGCCGACATGGGCATCTCCACCGCGGCTTCTTGCC GCGCAGAAATCGATTACCTGGAGGAGCAAATCTTGAGCCAAGAAGAGGACACCGACCTGC CGCTCGTCGGCAGCGTCCTCGCCTTGCTCCGCTACTGCCTATTCGCCGTGTTCGACCCTA GCAACGCGAAGGCGCTCCGGGATTGGCCGTTGTCGGGCAACAGGCAGCGGCTTCTCTCGA TTGGCGGCGGCGATGACACCTCCTTCTCGGTGCCAAAGGAGTTCTCATGCCCAATTTCTC TGGATTTGATGCGTGATCCCGTGGTGGCGTCCACCGGGCAGACGTATGACCGGCCGTCGA TCATACAGTGGATCGAGGAGGGCCATTCCACCTGCCCCAACTCCGGCCAAACCCTTGCAG ATCACCGGCTTGTGCCGAACCGTGCTCTCCGCAGCTTGATTTCACAGTGGTGTGGGGTGT ATGGCTTGCAGTATGATTCGCCCGAGAGCAACGAGGGGATGGCGGAATGTGTTGCTGCAT CTTGCAGTAGTCGGGCTGCAATGGAGGCAAACAAGGCCACAGCTAGGATTTTGGTCAGGA TGCTGGAGGACGGGTCAGAAAATGTAAAGGCAGTCGCTGCTAAGGAAATTCGGTTGCTGG CAAAGACCGGGAAGCAAAACCGGGCTTTCATCGCCGACTTGGGTGCGATTCCGCTGCTTT GCAGGTTGCTCTTGTCGAATGATTGGATGGCACAAGAGAATGCAGTGACAGCGCTGCTCA ATTTGTCAATCTTCGAGCCAAACAAGGGACGGATTATGGAACAGGAAGGCTGCTTGCGGC TTATCGTCGGTGTTCTACAGAATGGATGGACTACGGAAGCGAAGGAGAATGCTGCGGCCA CTCTGTTTAGTCTATCAGTGGTCCATAATTTCAAAAAACTGATCATGAATGAGCCTGGGG CTGTTGAGGAGCTGGCTAGTATGCTGACCAAGGGGACATCAAGGGGGAAGAAAGATGCGG TGATGGCACTCTTCAACCTCTCAACACATCCAGAAAGCTCAGCTCGGATGCTCGAGTCAT GCGCAGTTGTAGCTTTAATTCAGTCGCTGAGGAATGACACCGTGTCGGAGGAAGCTGCTG GTGCTTTGGCCCTGCTGATGAAGCAACCATCCATCGTGCATCTTGTTGGGAGCTCTGAAA CTGTGATCACTAGCCTTGTTGGGTTAATGCGGCGGGGAACTCCAAAAGGTAAGGAAAATG CAGTCTCAGCTTTATATGAGATTTGTCGTCGGGGCGGCTCTGCTTTGGTGCAGAGAGTAG CAAAGATTCCAGGGTTGAACACAGTAATACAGACCATCACCCTCAACGGAACAAAGCGCG CCAAGAAGAAAGCAAGCCTGATTGTCAAGATGTGCCAGAGAAGCCAAATGCCATCAGCAA TGGCACTAGGGAGCACATTGACAGTCGTTGATCGTTCATTGGTAGGGAACAACACATTAA GGCGTGCTGCGAGCTTTGGCAGTGGAGAATTGTCAAACCCGATTTCGATATCAGTGCAGG TGCCCTAGGTGAAAGGTTTCTACCCTGGATTATATGGATGGTTACATTTGGTGAGTTTTG TCCCCAAAATTCTTTCATTTCATGCTCCAATGAAGGTATACAAAATTTAATCCAAAGGAT TTAATACTCGAAATATATCAGATGTTCCTATGTTTGTGTGTGAAATGTGGATAACTGTGC AGACATATAGATGTGCAATTAGAGTTCCAGCTTGATGTTCCTCCTTGGCAAGCTCGGAAA TTGTCCAATTTTTGTTTTATTTTTTTATAAAAAAGCACCAAATATGTATGCTGTATGCTG TAAACTGTTTAAATTAATTAGAAGCTTTACACTGAGGCAACAGTGG