Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0230200-01
CDS Infomation

cds chromosome:IRGSP-1.0:2:7321447:7322881:1 gene:Os02g0230200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os02t0230200-01)
Sequence

ATGGACGCCTTCCTCGCCGGAATCCCGCAGCTCCGCAGGCCGGCGGCGCTGATCGCGTCG
TGCTGCGCGCTGGTCCTCCTCGCCACCGTCCTCCTCCTCCCGCGCGCTCCTCCCGCCGCC
CCGGAGCAGCTTGCCTCCGCCGCCGCCGCCGCCGCCGTCCGCCTCGACGCGAGGGTCGAG
CGGAGGAGCGGCAACGAGGTGCTGTGGCAGCTGCCGCCGCCGACGACGCCTCCCCGCGCC
GCGGTGTTCGTGGCCCCGGGGTGCACCATCCGCGCCACCGACTTCTTCGACGCCTCGCCG
GGGTGCCCGCGCTGCGCGGGGCTCCCCGAGGAGCGCCGCTTCACGCGCGAGGCGCTCCGC
CGCGGGTACGCCGTGCTCGCGGTGTCCAGCCGCGCGGAGTGCTGGTCCCTCGACACCGGG
GACGGGGGCGAGCTCGCCGCCGTGGAGTCCATCATCGAGTGGTGGGTCAAGGAGAGGCAC
CCCAACCAGCTCGCCGGCCTCCCGCTCGTCGGGATCGGCGCCTCTTCAGGCGGGTACTTC
CTCTCCGCGCTGGCGGCGAGGGTCAGGTTCAGCAGCGTCGCAATCATGATCGCCGAGGGC
GTGTTCGCCACGATGGAGGAGATCCCGGCGAGGTACCCGCCGGCGCTGTTCGTGCAAATG
CCCAAGGACGGCGAGAGGGCGCGGGAGGTGGCGGCGAGCATGGGCAAGCTCAGAGGGAGC
CGCGTCAGCGTGCGGGAGATCCAATGCGGCGAGTTCGCCGTGAGCGCCCAGTTCTTGGCG
GCGAGGATACCCGGGTTGACCCTCGCCGTCGCCGATGGGCTGGTCGATGTGCTTCGCCGG
AAGGGGTTCGTGGATGAGAAGGGGTTTCTGAAGAATGACGGGAGGAGCACGCCGTGGAAG
AAGGCGGCGGAGGAGGCGAAGATCTTGCCGGAGGAATTCCGGCTGGAGAGGCATGTCACG
GAGGAGCTGAATCTTGCATATGCGTACCATGAGTTTACCAGCCTCAAGAATGGGGAAATC
TTCGACTGGTTTGAGTCGCATATGGATCATAAGAGCTGA

Peptide Sequence

PEP ID

Os02t0230200-01
PEP Infomation

pep chromosome:IRGSP-1.0:2:7321447:7322881:1 gene:Os02g0230200 transcript:Os02t0230200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os02t0230200-01)
Sequence

MDAFLAGIPQLRRPAALIASCCALVLLATVLLLPRAPPAAPEQLASAAAAAAVRLDARVE
RRSGNEVLWQLPPPTTPPRAAVFVAPGCTIRATDFFDASPGCPRCAGLPEERRFTREALR
RGYAVLAVSSRAECWSLDTGDGGELAAVESIIEWWVKERHPNQLAGLPLVGIGASSGGYF
LSALAARVRFSSVAIMIAEGVFATMEEIPARYPPALFVQMPKDGERAREVAASMGKLRGS
RVSVREIQCGEFAVSAQFLAARIPGLTLAVADGLVDVLRRKGFVDEKGFLKNDGRSTPWK
KAAEEAKILPEEFRLERHVTEELNLAYAYHEFTSLKNGEIFDWFESHMDHKS

Transcript Sequence

Transcript ID

Os02t0230200-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:7321447:7322881:1 gene:Os02g0230200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os02t0230200-01)
Sequence

ATCCGAGCTTAAGATCTCTCTCTCCATTAGCGCCGCCGCCGCCGCCGCCGCCAAAAATCG
CCGGCGAAATGGACGCCTTCCTCGCCGGAATCCCGCAGCTCCGCAGGCCGGCGGCGCTGA
TCGCGTCGTGCTGCGCGCTGGTCCTCCTCGCCACCGTCCTCCTCCTCCCGCGCGCTCCTC
CCGCCGCCCCGGAGCAGCTTGCCTCCGCCGCCGCCGCCGCCGCCGTCCGCCTCGACGCGA
GGGTCGAGCGGAGGAGCGGCAACGAGGTGCTGTGGCAGCTGCCGCCGCCGACGACGCCTC
CCCGCGCCGCGGTGTTCGTGGCCCCGGGGTGCACCATCCGCGCCACCGACTTCTTCGACG
CCTCGCCGGGGTGCCCGCGCTGCGCGGGGCTCCCCGAGGAGCGCCGCTTCACGCGCGAGG
CGCTCCGCCGCGGGTACGCCGTGCTCGCGGTGTCCAGCCGCGCGGAGTGCTGGTCCCTCG
ACACCGGGGACGGGGGCGAGCTCGCCGCCGTGGAGTCCATCATCGAGTGGTGGGTCAAGG
AGAGGCACCCCAACCAGCTCGCCGGCCTCCCGCTCGTCGGGATCGGCGCCTCTTCAGGCG
GGTACTTCCTCTCCGCGCTGGCGGCGAGGGTCAGGTTCAGCAGCGTCGCAATCATGATCG
CCGAGGGCGTGTTCGCCACGATGGAGGAGATCCCGGCGAGGTACCCGCCGGCGCTGTTCG
TGCAAATGCCCAAGGACGGCGAGAGGGCGCGGGAGGTGGCGGCGAGCATGGGCAAGCTCA
GAGGGAGCCGCGTCAGCGTGCGGGAGATCCAATGCGGCGAGTTCGCCGTGAGCGCCCAGT
TCTTGGCGGCGAGGATACCCGGGTTGACCCTCGCCGTCGCCGATGGGCTGGTCGATGTGC
TTCGCCGGAAGGGGTTCGTGGATGAGAAGGGGTTTCTGAAGAATGACGGGAGGAGCACGC
CGTGGAAGAAGGCGGCGGAGGAGGCGAAGATCTTGCCGGAGGAATTCCGGCTGGAGAGGC
ATGTCACGGAGGAGCTGAATCTTGCATATGCGTACCATGAGTTTACCAGCCTCAAGAATG
GGGAAATCTTCGACTGGTTTGAGTCGCATATGGATCATAAGAGCTGAAAGTGTTCTAGTG
GCAATGCTACTGAAACTGATTTGAAGCGAGCAATTCGATGGTGGATCCAGCTGATGCTTC
TGATTTTGAGGAATGGAATGCACAATCATTGATTCAAGAGAGATGGGAAGATGGAGGAAA
ACCTCGTAAGGCTTCTTCTCGCAGTTTACCGTTCACAATGCCCACTTGTAGTTTCTAATA
CAATTACGTTCCATTCTTCCATTGTTGTTGTTGATGTAACAGGCGTTTTATTACCATTGT
ATCTTGTAACAGAGGAATTACTTCAATCCACAGAAAAATGATAAAGATGCCGAAC