Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0228900-01
CDS Infomation

cds chromosome:IRGSP-1.0:2:7245057:7248588:-1 gene:Os02g0228900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:IAA7 description:Similar to Auxin-responsive protein IAA18 (Indoleacetic acid-induced protein 18). (Os02t0228900-01)
Sequence

ATGGGGGAGGCGTCGGAGAGCATGAAGAAGATCAGCAGAGGCCGTCTCGGCGGAAGCTGG
ATGGGGGAGCCAAGCGATCACCATCGCCATGGCGATGAACAGGAGGAGGAGGAGAAGACG
CTGGAGCTCAGCCTTGGGCTCCCCGGAGGAGGATGGCGAGCGGCGTGCAGGGACAAGGGG
ACGACGACGAAGCACTCCATTGCAGCAGCTGCTGCTGCTGATGATGATGATGGTGACAAG
AGCTCCATGCTCTCCCTGGGCTACTCCACACTCGTCTCCCACTCGCAAGGCAAGGCAAAC
AAAAACAAGGGGTCCCCAGAGGAAGAAGAGGCACATCCACCACCAGCTACAGGGAATAAT
GCACTTGCATCCAACAATAATGGCTGCTTCCAGACAAGATCTCCTAGTACTCCTGTTGTT
GGTTGGCCTCCGGTTCGAACATTCAGAAGAAATCTGGCTACATCCAGCAAAGCATCTCTT
GAACTGCAGAATGGAAAGAAGGCTGCAAAAGCAGAAGAGATCAAGAGAGCTCCATTCATA
AAGATAAACATGGATGGTGTCCCTATTGGTAGAAAGATCGATCTGAATGCTTTTGATAGC
TATGAGAAGCTTTCTTTAGCGGTTGACAAGCTATTCCGAGGCCTTCTTGCAGCCCAAAGA
GACCCCCTCACTGCTGGAGCAAAGGACTGCCAGCAGGAAGATGTGGCAATATCTGGCTTG
CTAGATGGAACTGGGGAGTACACTTTGGTTTATGAGGATTATGAAGGCGACAAGGTGCTT
GTTGGAGATGTGCCATGGGGGATGTTTGTTTCTTCAGTTAAGAGACTGAGAGTACTGAAG
ACATCTGACCTCTCTTCATCTCTAATAACCTCTGGACGGAAAAGAACAGCTGCTGAGTGT
TGA

Peptide Sequence

PEP ID

Os02t0228900-01
PEP Infomation

pep chromosome:IRGSP-1.0:2:7245057:7248588:-1 gene:Os02g0228900 transcript:Os02t0228900-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:IAA7 description:Similar to Auxin-responsive protein IAA18 (Indoleacetic acid-induced protein 18). (Os02t0228900-01)
Sequence

MGEASESMKKISRGRLGGSWMGEPSDHHRHGDEQEEEEKTLELSLGLPGGGWRAACRDKG
TTTKHSIAAAAAADDDDGDKSSMLSLGYSTLVSHSQGKANKNKGSPEEEEAHPPPATGNN
ALASNNNGCFQTRSPSTPVVGWPPVRTFRRNLATSSKASLELQNGKKAAKAEEIKRAPFI
KINMDGVPIGRKIDLNAFDSYEKLSLAVDKLFRGLLAAQRDPLTAGAKDCQQEDVAISGL
LDGTGEYTLVYEDYEGDKVLVGDVPWGMFVSSVKRLRVLKTSDLSSSLITSGRKRTAAEC

Transcript Sequence

Transcript ID

Os02t0228900-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:7245057:7248588:-1 gene:Os02g0228900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:IAA7 description:Similar to Auxin-responsive protein IAA18 (Indoleacetic acid-induced protein 18). (Os02t0228900-01)
Sequence

GGGCGGCATCTCAGCTCAGCTCAGGCTCAGCTAGACGCTACTCGCATCGGAGCATCACAT
TGCCGTGTGCCGTTGCTCGCATTGCAGCTGCAGCTACTACTACCATTCCCACACCTTTTC
TAGCTCTCTGTTCCACACCTCTCCCTCTTGCATTGCAGCCAAGACAGCAACCAGCAGCAG
CAGCAGCTCAGCTAGCTAGTTTCTGCTTTCTTGATTTGTTCTTGGATTTGGGCGAGCTGT
ACATCTAGAGAGCGGGTGATGGGGGAGGCGTCGGAGAGCATGAAGAAGATCAGCAGAGGC
CGTCTCGGCGGAAGCTGGATGGGGGAGCCAAGCGATCACCATCGCCATGGCGATGAACAG
GAGGAGGAGGAGAAGACGCTGGAGCTCAGCCTTGGGCTCCCCGGAGGAGGATGGCGAGCG
GCGTGCAGGGACAAGGGGACGACGACGAAGCACTCCATTGCAGCAGCTGCTGCTGCTGAT
GATGATGATGGTGACAAGAGCTCCATGCTCTCCCTGGGCTACTCCACACTCGTCTCCCAC
TCGCAAGGCAAGGCAAACAAAAACAAGGGGTCCCCAGAGGAAGAAGAGGCACATCCACCA
CCAGCTACAGGGAATAATGCACTTGCATCCAACAATAATGGCTGCTTCCAGACAAGATCT
CCTAGTACTCCTGTTGTTGGTTGGCCTCCGGTTCGAACATTCAGAAGAAATCTGGCTACA
TCCAGCAAAGCATCTCTTGAACTGCAGAATGGAAAGAAGGCTGCAAAAGCAGAAGAGATC
AAGAGAGCTCCATTCATAAAGATAAACATGGATGGTGTCCCTATTGGTAGAAAGATCGAT
CTGAATGCTTTTGATAGCTATGAGAAGCTTTCTTTAGCGGTTGACAAGCTATTCCGAGGC
CTTCTTGCAGCCCAAAGAGACCCCCTCACTGCTGGAGCAAAGGACTGCCAGCAGGAAGAT
GTGGCAATATCTGGCTTGCTAGATGGAACTGGGGAGTACACTTTGGTTTATGAGGATTAT
GAAGGCGACAAGGTGCTTGTTGGAGATGTGCCATGGGGGATGTTTGTTTCTTCAGTTAAG
AGACTGAGAGTACTGAAGACATCTGACCTCTCTTCATCTCTAATAACCTCTGGACGGAAA
AGAACAGCTGCTGAGTGTTGACCTTCTTTTTTGGAGCTGCTTTGACACATTCAGTGACCT
GCTGTGAAGAAGAATATGATCTTCTGAGCTTGTATCATCGTCTCTTTCTCTCAATGTCTT
GCTGTGCTGATCTTTTGGGGTTTTCCTGTTCCTACTTAACCAACTTGCTTCCTTCTGTTT
AAGACACTTGTGTGAAGTGAGTGCAATTTGACATGACCATCATGTAAATGTTCAGCTAAA
TGCTCTACATTTATGCAGTTTATTCTC