Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0227000-01
CDS Infomation	cds chromosome:IRGSP-1.0:2:7126763:7132072:1 gene:Os02g0227000 gene_biotype:protein_coding transcript_biotype:protein_coding description:HAD superfamily hydrolase-like, type 3 domain containing protein. (Os02t0227000-01)
Sequence	ATGGCGCGCCTCCACCACCTCCTCCTCTCCCGCGCGCTCGCCTCCCACCCCCTCCACCAC CACCTCCTCCCGTCTCCGCCGCCCTCCTCCAGCCTCCTCCCACCGCTGCTCCCCTCGCCA CCGCGTCCTCCTTCTCCTCCTTCTCCGCTTCCCGGTGGTCGCGGCGTGCCCCACTCCTCG CTCGCCGCGGCCTCGCGGCACTACGCGTCGTCGACACCTGGACGCCGGAGGCGAGCGCCG CCGATGCTGCTGAGGCGGAGGAGGGCGAGGCGGCCGCCGCGGGAGGGCCCCGCCGAGCTC AACGTGCAGATTGGCATCGAGGAAGCCCTCCCCGACGACCCCACTATCCTGAGCATTGCA GAAGCGCTTCAAATGGATGTTGCTAAGGCAGCGAAGGTGGCCTTTGACCACCTCGAAAAC TCGGAGTACAAAACCAGAGACAATTGTATAAGCGATGTGAATAAGTACGATACTGTTGAG GTCTCTATACTGCTTTGTGATGACGATTTCATTCGGAAACTGAATAAGGAATGGAGGGAC GAGGATCACGCTACGGATGTTCTATCAATGTCGCAGCATATCCCCGGGCTGGACATTCCC ATTCTGCAGTTGGGTGACATAGTAATCTCTATTGACACTGCACAACGGCAAGCGGAAGAA AGGGGCCATACACTGCATGATGAGATAAGAATTCTCATGGTGCACGGATTATTGCATTTA TTGGGCTTTGATCATGAGCTCAGCAAAGTGGCTGAAGAAGAGATGGAGAGCGGGGAAGAA CATATCTTAAATTCTCTAGATTGGAAAGGGAAAGGACTTATTAAGAGTGCATATGATTCC ATTCATGACATGGATCATTCACAAAGTTATGTTGAGGCCAGTAGAGATTCAGATGAAATT AACCTACGGGAAGTTCATCAACCAAAACTGAGCCATATCGTATGTGATATAGATGGCATT GTGGATAATGAAGGATACCCGCATGAAGAATCAATAGAATCTTTGAGAGAGGCAGTTTCA AGGGGAATAAACGTTATCACGGTGACTGGAAAGACCCGGGCTTCCACAATAAGAACTTTC AGGCTTCTTGATTTGGGAGGGAAATATCGTTTTATATCAGAGAGTTCACCTGGTGTATTT CTACAGGGTTCACTTGTTTATGGAAGGCACGGCCAAGAGATTTACAGAGCAAACTTAGGT TTGGATATCTGCAAGGAGGCATTTTTGTACTCCTTGAAGTATAGTATACCTCTTGTTGCA TACCATGAGGAACAATGTTTGACCCTCTTTGAACATCCTTTGGTTGATTTGTTGCACACA ATCCACTATGAGACCAAGGTAAAAGTGGTGCCTTCAGTTGAGGACCTCTTGGGGTATTCA TCTTTTCAGAAGTTGCTTTTCCTTGACAAAGTGGATGGGGATTCATCTGTACTGAGACAG CATTGGTCAGAACTAACACAAGGAAGAGCACGTGTTATCAAAGCGCATTCAAGTATGATT GAGATTGTTCCACTTAATGCTTCAAAGGGTGGTGGTATAAGGATTTTACTTGATCATCTT GGAATAACTGAAGATTCTGATCTTGATGCTGTGGGAGACTACACAAGATGGCTAAGCAAC ATATTTACTTAA

Peptide Sequence

PEP ID	Os02t0227000-01
PEP Infomation	pep chromosome:IRGSP-1.0:2:7126763:7132072:1 gene:Os02g0227000 transcript:Os02t0227000-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:HAD superfamily hydrolase-like, type 3 domain containing protein. (Os02t0227000-01)
Sequence	MARLHHLLLSRALASHPLHHHLLPSPPPSSSLLPPLLPSPPRPPSPPSPLPGGRGVPHSS LAAASRHYASSTPGRRRRAPPMLLRRRRARRPPREGPAELNVQIGIEEALPDDPTILSIA EALQMDVAKAAKVAFDHLENSEYKTRDNCISDVNKYDTVEVSILLCDDDFIRKLNKEWRD EDHATDVLSMSQHIPGLDIPILQLGDIVISIDTAQRQAEERGHTLHDEIRILMVHGLLHL LGFDHELSKVAEEEMESGEEHILNSLDWKGKGLIKSAYDSIHDMDHSQSYVEASRDSDEI NLREVHQPKLSHIVCDIDGIVDNEGYPHEESIESLREAVSRGINVITVTGKTRASTIRTF RLLDLGGKYRFISESSPGVFLQGSLVYGRHGQEIYRANLGLDICKEAFLYSLKYSIPLVA YHEEQCLTLFEHPLVDLLHTIHYETKVKVVPSVEDLLGYSSFQKLLFLDKVDGDSSVLRQ HWSELTQGRARVIKAHSSMIEIVPLNASKGGGIRILLDHLGITEDSDLDAVGDYTRWLSN IFT

Transcript Sequence

Transcript ID	Os02t0227000-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:7126763:7132072:1 gene:Os02g0227000 gene_biotype:protein_coding transcript_biotype:protein_coding description:HAD superfamily hydrolase-like, type 3 domain containing protein. (Os02t0227000-01)
Sequence	CTCCTCCGGCTAAAAACCTTCTAGAATCTTCTAGACCCCTCGCGCTCCTCCATGGCGCGC CTCCACCACCTCCTCCTCTCCCGCGCGCTCGCCTCCCACCCCCTCCACCACCACCTCCTC CCGTCTCCGCCGCCCTCCTCCAGCCTCCTCCCACCGCTGCTCCCCTCGCCACCGCGTCCT CCTTCTCCTCCTTCTCCGCTTCCCGGTGGTCGCGGCGTGCCCCACTCCTCGCTCGCCGCG GCCTCGCGGCACTACGCGTCGTCGACACCTGGACGCCGGAGGCGAGCGCCGCCGATGCTG CTGAGGCGGAGGAGGGCGAGGCGGCCGCCGCGGGAGGGCCCCGCCGAGCTCAACGTGCAG ATTGGCATCGAGGAAGCCCTCCCCGACGACCCCACTATCCTGAGCATTGCAGAAGCGCTT CAAATGGATGTTGCTAAGGCAGCGAAGGTGGCCTTTGACCACCTCGAAAACTCGGAGTAC AAAACCAGAGACAATTGTATAAGCGATGTGAATAAGTACGATACTGTTGAGGTCTCTATA CTGCTTTGTGATGACGATTTCATTCGGAAACTGAATAAGGAATGGAGGGACGAGGATCAC GCTACGGATGTTCTATCAATGTCGCAGCATATCCCCGGGCTGGACATTCCCATTCTGCAG TTGGGTGACATAGTAATCTCTATTGACACTGCACAACGGCAAGCGGAAGAAAGGGGCCAT ACACTGCATGATGAGATAAGAATTCTCATGGTGCACGGATTATTGCATTTATTGGGCTTT GATCATGAGCTCAGCAAAGTGGCTGAAGAAGAGATGGAGAGCGGGGAAGAACATATCTTA AATTCTCTAGATTGGAAAGGGAAAGGACTTATTAAGAGTGCATATGATTCCATTCATGAC ATGGATCATTCACAAAGTTATGTTGAGGCCAGTAGAGATTCAGATGAAATTAACCTACGG GAAGTTCATCAACCAAAACTGAGCCATATCGTATGTGATATAGATGGCATTGTGGATAAT GAAGGATACCCGCATGAAGAATCAATAGAATCTTTGAGAGAGGCAGTTTCAAGGGGAATA AACGTTATCACGGTGACTGGAAAGACCCGGGCTTCCACAATAAGAACTTTCAGGCTTCTT GATTTGGGAGGGAAATATCGTTTTATATCAGAGAGTTCACCTGGTGTATTTCTACAGGGT TCACTTGTTTATGGAAGGCACGGCCAAGAGATTTACAGAGCAAACTTAGGTTTGGATATC TGCAAGGAGGCATTTTTGTACTCCTTGAAGTATAGTATACCTCTTGTTGCATACCATGAG GAACAATGTTTGACCCTCTTTGAACATCCTTTGGTTGATTTGTTGCACACAATCCACTAT GAGACCAAGGTAAAAGTGGTGCCTTCAGTTGAGGACCTCTTGGGGTATTCATCTTTTCAG AAGTTGCTTTTCCTTGACAAAGTGGATGGGGATTCATCTGTACTGAGACAGCATTGGTCA GAACTAACACAAGGAAGAGCACGTGTTATCAAAGCGCATTCAAGTATGATTGAGATTGTT CCACTTAATGCTTCAAAGGGTGGTGGTATAAGGATTTTACTTGATCATCTTGGAATAACT GAAGATTCTGATCTTGATGCTGTGGGAGACTACACAAGATGGCTAAGCAACATATTTACT TAACCATTCTTAAGCAAAAGCTTGGTGATAAGCTTGAGATAAGAAGAAATGACATGCATA TGTGATGCACAAAAAGGAAAACAAACAAGGATTCCACATTGGACATGTCTATTTTGAAGC ATGTAAGAAAACAAACTTCATACCACCGTCCTTTTGGGCTGGAAGAGAAATTACTGTACC CTTAAACTTTTGAAAGGGATATGGGTGTGGATGGAAAGTTTGCTACTTCCTTCAGATCTC ATTTATGGAGGTGTGTTGGAAATAAAATCAGACCAGCCCATCTGTGATGTCAAGAAAACA AACATCAAGAAAGTGCAATTTGCAACTAGTGAAAATTTTATGTGAGACTATTAGTGTTCC TTTGCTCTGAGCAAACGTGTCAAATTCATGCCAATTTTGTTTTTCTGTAGAATACCTGTA TAGCTGCGCTGCACAAAGCATTGCTAGTTGTTGCTCGATCATGTAATGCAAGAGTACTCT AGTTCCCAGCTGATAGGATTTTGCTTATTAGCTAGCTGTATTTCATTCCACCCGTTTTTA GTAGTTGAATTTCAAATGGATGGACTTAAGGAAATGTAAGAAGCCAGGTTGATCCCAGAA GAAAAAAAATAGTTGAGTTTCCTTGTGAAAAGGAGCAGT