Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0226200-01
CDS Infomation

cds chromosome:IRGSP-1.0:2:7078703:7079848:1 gene:Os02g0226200 gene_biotype:protein_coding transcript_biotype:protein_coding description:HAD-superfamily subfamily IB hydrolase, hypothetical 1 protein. (Os02t0226200-01)
Sequence

ATGGCGGCGAGCGGCGGCGGCAATGGCGTGGTGGTGGTGTTCGACTTCGACAAGACCATC
ATCGACTGCGACAGCGACAACTGGGTCGTCGACGCGCTCGGCGCCACCGCCCGCTTCGAC
GACCTCCTCTGCCGCCTCCCCTGGAACTCCGCCATCGACGCCATGATGGGGGAGCTGCAC
GCGGAGGGGAGGACGGTGGAGGAGGTGGCGGCGAGCCTGAGGGCAGCGCCGCTGTCGCCG
CGCGTGGCGGCGGCCGTCGAGACGGCGCGCGCGCTCGGGTGCGAGCTCAGGGTGCTCAGC
GACGCCAACGCCTTCTTCGTCGGCGCCGTCCTCGACCACCACGGCCTCGCCGGCTGCTTC
TCGGCGGTCGACACCAACCCGGCCGCCGTCGACGCCGACGGCCGCCTCCGGATCCTCCCC
TACCACGGCCTCCCCGGCCATGGCTGCCCCCTCGCCACCTGCCCTCCCAACATGTGCAAG
GGCAAGGTCATGGAGAGGATCATCGACGAGCTATCCTGCGGCTGCGGTGGCGCGCTGGCG
GCGAGGAGGAGGAGGGTGGTGTACGTCGGCGACGGGAGAGGCGACTACTGCCCGTCGCTG
AAGCTGACGGAGATGGACTACGTGATGCCGAGGAAGGGGTACCCGGTGTGGGACCTCATC
GCCGGCGGCGACCGCGCCGCCGTCCGGGCCGACGTCCGCGAGTGGGCGGACTTCGAGGAC
CTCGAGGCGGTGCTGCTCGGCATCGTCGCCGAGTGCCTCACGTCGGAACACGACGACGCC
GACGACGATGGCGGCGAGGCGGCGCCGCCGGCGGAGTGCCGTGCGCTGCCGGCGACGCTG
GCTTCCGGTCAGGAGGCAATTCTGCCCAAGGCAGTTCACGTGCCTAATTGA

Peptide Sequence

PEP ID

Os02t0226200-01
PEP Infomation

pep chromosome:IRGSP-1.0:2:7078703:7079848:1 gene:Os02g0226200 transcript:Os02t0226200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:HAD-superfamily subfamily IB hydrolase, hypothetical 1 protein. (Os02t0226200-01)
Sequence

MAASGGGNGVVVVFDFDKTIIDCDSDNWVVDALGATARFDDLLCRLPWNSAIDAMMGELH
AEGRTVEEVAASLRAAPLSPRVAAAVETARALGCELRVLSDANAFFVGAVLDHHGLAGCF
SAVDTNPAAVDADGRLRILPYHGLPGHGCPLATCPPNMCKGKVMERIIDELSCGCGGALA
ARRRRVVYVGDGRGDYCPSLKLTEMDYVMPRKGYPVWDLIAGGDRAAVRADVREWADFED
LEAVLLGIVAECLTSEHDDADDDGGEAAPPAECRALPATLASGQEAILPKAVHVPN

Transcript Sequence

Transcript ID

Os02t0226200-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:7078703:7079848:1 gene:Os02g0226200 gene_biotype:protein_coding transcript_biotype:protein_coding description:HAD-superfamily subfamily IB hydrolase, hypothetical 1 protein. (Os02t0226200-01)
Sequence

AGCAGCAGCAAGAAGAAGACGCGACGACGTAGCTAGCTAGATCGAGAGATCAATGGCGGC
GAGCGGCGGCGGCAATGGCGTGGTGGTGGTGTTCGACTTCGACAAGACCATCATCGACTG
CGACAGCGACAACTGGGTCGTCGACGCGCTCGGCGCCACCGCCCGCTTCGACGACCTCCT
CTGCCGCCTCCCCTGGAACTCCGCCATCGACGCCATGATGGGGGAGCTGCACGCGGAGGG
GAGGACGGTGGAGGAGGTGGCGGCGAGCCTGAGGGCAGCGCCGCTGTCGCCGCGCGTGGC
GGCGGCCGTCGAGACGGCGCGCGCGCTCGGGTGCGAGCTCAGGGTGCTCAGCGACGCCAA
CGCCTTCTTCGTCGGCGCCGTCCTCGACCACCACGGCCTCGCCGGCTGCTTCTCGGCGGT
CGACACCAACCCGGCCGCCGTCGACGCCGACGGCCGCCTCCGGATCCTCCCCTACCACGG
CCTCCCCGGCCATGGCTGCCCCCTCGCCACCTGCCCTCCCAACATGTGCAAGGGCAAGGT
CATGGAGAGGATCATCGACGAGCTATCCTGCGGCTGCGGTGGCGCGCTGGCGGCGAGGAG
GAGGAGGGTGGTGTACGTCGGCGACGGGAGAGGCGACTACTGCCCGTCGCTGAAGCTGAC
GGAGATGGACTACGTGATGCCGAGGAAGGGGTACCCGGTGTGGGACCTCATCGCCGGCGG
CGACCGCGCCGCCGTCCGGGCCGACGTCCGCGAGTGGGCGGACTTCGAGGACCTCGAGGC
GGTGCTGCTCGGCATCGTCGCCGAGTGCCTCACGTCGGAACACGACGACGCCGACGACGA
TGGCGGCGAGGCGGCGCCGCCGGCGGAGTGCCGTGCGCTGCCGGCGACGCTGGCTTCCGG
TCAGGAGGCAATTCTGCCCAAGGCAGTTCACGTGCCTAATTGACTGGGCCAGATGATAGA
TTAACGAACTAGTATTAATTAATTAATTAATTAATTAATTAATCAAACATGCTTAAGTAA
TTATATATTCAGTAATAAACTTCACCTGTGTTGTTGC