Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0219400-01
CDS Infomation

cds chromosome:IRGSP-1.0:2:6668862:6672904:-1 gene:Os02g0219400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Yarrowia lipolytica chromosome F of strain CLIB99 of Yarrowia lipolytica. (Os02t0219400-01)
Sequence

ATGGCGTCCGGCCGCGGCGGGATCCCCGGGCCCTCTCGCGCCCTCCTCGTCCTCCTCCTC
CCGGCGTTGCTGATGCTCCTGGCCTTCTCCACCTCCTCCTCCGCGGCGGCGTCGTCGCCG
GGCGCGATGCACAACAACAACTGGGCCGTGCTCGTCTGCACCTCACGCTTCTGGTTTAAT
TATCGACATATGGCAAATACTCTGTCTCTGTACAGGACAGTTAAGAGATTAGGAATACCC
GACGAGCGGATCATACTTATGTTGGCGGATGATATGGCTTGTAACCCTAGGAATAACTAT
CCTGCCCAAGTGTTCAATAATGAGAACCACCAGCTTAATCTATATGGTGACAACGTTGAG
GTTGATTACCGAGGTTATGAGGTGACAGTTGAAAACTTTTTGAGAGTTTTGACTGGAAGA
CATGAAAGTGCTGTACCAAGATCAAAGCGTCTTTTAAGTGATGAAGGAAGCCATATTCTC
TTGTATATGACAGGACATGGTGGGGATGAGTTTTTGAAGTTCCAAGATTCTGAAGAACTT
CAGAGCCATGATTTAGCAGATGCAGTAAAGCAAATGAAGGAGAAGCATAGATTTAAAGAG
TTGTTGATAATGGTAGATACATGCCAAGCTGCCACTCTCTTTTCACAGCTTCAATCACCT
GGTGTTTTAACGATTGGTAGCAGCATGAAGGGTGAAAACTCTTATTCTCATCATCTTGAT
TCAGACATTGGTGTTTCTGTTGTGGATAGGTTTACCTTTTATACACTTGCTTTCTTTGAG
AAACTCAACATGTATAGCAATGCCTCATTGAACAGTCTTTTCAACTCCTATAATCCTTCT
ATGCTGTTGTCGACTGCGTATTATCGGATGGATCTTTATGAACGGCCATTAAATGAGGTC
CCTGTGACAAATTTCTTTGGATCAGTCATGAATACTATCCACACAGATTCTGCCTACTCA
GGCTTCTTAGCTGCAGATGATATTGGAACCATCCCATCCACTGGAGATAATCTACTGAAC
CATGCTGTGTTACAGAATAAGGCTAGCCAAAGAAGATCAAACATTGAAGAAGTGAAAGAA
GCACAAGTAAGGTCCCATGGGTGGACAGATGTTCTGCTGGAACAGCTTGATGTCAAGAAT
GCTGACACTATTGTCATGTATGGTCTGGGAACAATGGGTATACTGTTAGCAATTTCAACC
TGGTTATCAATGTAG

Peptide Sequence

PEP ID

Os02t0219400-01
PEP Infomation

pep chromosome:IRGSP-1.0:2:6668862:6672904:-1 gene:Os02g0219400 transcript:Os02t0219400-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Yarrowia lipolytica chromosome F of strain CLIB99 of Yarrowia lipolytica. (Os02t0219400-01)
Sequence

MASGRGGIPGPSRALLVLLLPALLMLLAFSTSSSAAASSPGAMHNNNWAVLVCTSRFWFN
YRHMANTLSLYRTVKRLGIPDERIILMLADDMACNPRNNYPAQVFNNENHQLNLYGDNVE
VDYRGYEVTVENFLRVLTGRHESAVPRSKRLLSDEGSHILLYMTGHGGDEFLKFQDSEEL
QSHDLADAVKQMKEKHRFKELLIMVDTCQAATLFSQLQSPGVLTIGSSMKGENSYSHHLD
SDIGVSVVDRFTFYTLAFFEKLNMYSNASLNSLFNSYNPSMLLSTAYYRMDLYERPLNEV
PVTNFFGSVMNTIHTDSAYSGFLAADDIGTIPSTGDNLLNHAVLQNKASQRRSNIEEVKE
AQVRSHGWTDVLLEQLDVKNADTIVMYGLGTMGILLAISTWLSM

Transcript Sequence

Transcript ID

Os02t0219400-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:6668862:6672904:-1 gene:Os02g0219400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Yarrowia lipolytica chromosome F of strain CLIB99 of Yarrowia lipolytica. (Os02t0219400-01)
Sequence

GGCGACCAGCCCCGGCTGCCCTTCACCCTGCGCCGCCCCAGTCCACCGCCGCGTTCGCCG
GAGCGACGATCTCGCGCCGCCGCCTCCTCCTCCTCCCCTAGATTCCTGACCCGGCCACGC
CGGCGGCGCTCCCCCTCCGCCGGAGGCTGGCATGGCGTCCGGCCGCGGCGGGATCCCCGG
GCCCTCTCGCGCCCTCCTCGTCCTCCTCCTCCCGGCGTTGCTGATGCTCCTGGCCTTCTC
CACCTCCTCCTCCGCGGCGGCGTCGTCGCCGGGCGCGATGCACAACAACAACTGGGCCGT
GCTCGTCTGCACCTCACGCTTCTGGTTTAATTATCGACATATGGCAAATACTCTGTCTCT
GTACAGGACAGTTAAGAGATTAGGAATACCCGACGAGCGGATCATACTTATGTTGGCGGA
TGATATGGCTTGTAACCCTAGGAATAACTATCCTGCCCAAGTGTTCAATAATGAGAACCA
CCAGCTTAATCTATATGGTGACAACGTTGAGGTTGATTACCGAGGTTATGAGGTGACAGT
TGAAAACTTTTTGAGAGTTTTGACTGGAAGACATGAAAGTGCTGTACCAAGATCAAAGCG
TCTTTTAAGTGATGAAGGAAGCCATATTCTCTTGTATATGACAGGACATGGTGGGGATGA
GTTTTTGAAGTTCCAAGATTCTGAAGAACTTCAGAGCCATGATTTAGCAGATGCAGTAAA
GCAAATGAAGGAGAAGCATAGATTTAAAGAGTTGTTGATAATGGTAGATACATGCCAAGC
TGCCACTCTCTTTTCACAGCTTCAATCACCTGGTGTTTTAACGATTGGTAGCAGCATGAA
GGGTGAAAACTCTTATTCTCATCATCTTGATTCAGACATTGGTGTTTCTGTTGTGGATAG
GTTTACCTTTTATACACTTGCTTTCTTTGAGAAACTCAACATGTATAGCAATGCCTCATT
GAACAGTCTTTTCAACTCCTATAATCCTTCTATGCTGTTGTCGACTGCGTATTATCGGAT
GGATCTTTATGAACGGCCATTAAATGAGGTCCCTGTGACAAATTTCTTTGGATCAGTCAT
GAATACTATCCACACAGATTCTGCCTACTCAGGCTTCTTAGCTGCAGATGATATTGGAAC
CATCCCATCCACTGGAGATAATCTACTGAACCATGCTGTGTTACAGAATAAGGCTAGCCA
AAGAAGATCAAACATTGAAGAAGTGAAAGAAGCACAAGTAAGGTCCCATGGGTGGACAGA
TGTTCTGCTGGAACAGCTTGATGTCAAGAATGCTGACACTATTGTCATGTATGGTCTGGG
AACAATGGGTATACTGTTAGCAATTTCAACCTGGTTATCAATGTAGAAACAAAGAAGTAT
GAAGTGTGCTGTTCACACATCATCCTCTTCTAGATAAATGAATCATCCTAACCCCTGGAT
AGAGATCAAAAAGGAAGAAACTTTGGAGGTTAACTCTTTGTATATTTTTTCTCTTTGGTA
ATGTCCATTCAGCTGGGACATAATTTTGTATTTAGTTTTTGTATGCCACGTTCAACTTTT
TGTCAGGATACTCATTATTTGCC