Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0218800-01
CDS Infomation	cds chromosome:IRGSP-1.0:2:6637973:6639828:1 gene:Os02g0218800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ALLENE OXIDE SYNTHASE 4 description:Allene oxide synthase (CYP74A4), Fatty acid 9-/13-hydroperoxide lyase (CYP74C), Biosynthesis of jasmonic acid (JA), Plant defense (Os02t0218800-01)
Sequence	ATGGCGCCGCCGCGAGCCAACTCCGGCGACGGTAACGACGGCGCCGTCGGAGGGCAGAGC AAGCTCTCGCCGTCGGGCCTGCTGATACGCGAGATTCCGGGCGGCTACGGCGTGCCCTTC CTCTCGCCGCTGCGCGACCGCCTCGACTACTATTACTTCCAGGGCGCCGACGAGTTCTTC CGCTCACGCGTCGCCCGCCACGGCGGCGCCACCGTGCTCCGCGTCAACATGCCGCCCGGC CCCTTCCTCGCCGGCGACCCCCGCGTCGTCGCCCTCCTCGACGCGCGCAGCTTCCGCGTC CTCCTCGACGACTCCATGGTGGACAAGGCCGACACGCTCGACGGCACCTTCATGCCGTCG CTCGCGCTCTTCGGCGGCCACCGCCCGCTCGCCTTCCTCGACGCCGCCGACCCTCGCCAC GCCAAGATCAAGCGCGTCGTGATGTCGCTCGCCGCGGCGAGGATGCACCACGTCGCGCCG GCGTTCCGCGCCGCCTTCGCCGCCATGTTCGACGAGGTCGACGCCGGCCTCGTCGCCGGC GGCCCCGTCGAGTTCAACAAGCTCAACATGCGGTACATGCTCGACTTCACCTGCGCCGCG CTGTTCGGCGGCGCGCCGCCGAGCAAGGCCATGGGCGACGCTGCCGTGACGAAGGCGGTG AAGTGGCTCATCTTCCAGCTTCACCCGCTCGCCAGCAAGGTCGTCAAGCCGTGGCCGCTG GAGGACCTCCTCCTCCACACCTTCCGCCTGCCGCCGTTCCTGGTGCGCCGCGAGTACGGC GAGATCACGGCGTACTTCGCCGCCGCCGCCGCGGCCATCCTCGACGACGCCGAGAAGAAC CACCCGGGAATCCCGCGCGACGAGCTCCTCCACAACCTCGTGTTCGTCGCCGTCTTCAAC GCCTACGGCGGCTTCAAGATCTTCCTGCCACACATCGTCAAGTGGCTCGCCCGCGCCGGC CCGGAGCTCCACGCCAAGCTAGCCTCCGAGGTCCGCGCCGCCGCGCCCGCCGGCGGCGGC GAGATCACCATCTCCGCCGTGGAGAAGGAGATGCCGCTGGTGAAGTCGGTGGTGTGGGAG GCGCTGCGCATGAACCCGCCGGTGGAGTTCCAGTACGGGCGCGCGCGGCGCGACATGGTC GTCGAGAGCCACGACGCGGCGTACGAGGTCCGCAAGGGGGAGCTGCTGTTCGGGTACCAG CCGCTCGCCACCCGCGACGAGAAGGTGTTCGACCGCGCCGGCGAGTTCGTCCCCGACCGG TTCGTCTCCGGCGCCGGAAGCGCCGCCCGGCCGCTGCTGGAGCACGTGGTGTGGTCGAAC GGGCCGGAGACCGGGACGCCATCGGAGGGGAACAAGCAGTGCCCCGGGAAGGACATGGTG GTGGCGGTGGGGCGGCTGATGGTGGCGGGGCTGTTCCGGCGGTACGACACGTTCGCCGCC GACGTGGAGGAGCTGCCGCTTGAGCCGGTGGTCACGTTCACGTCGCTGACCCGCGCCGCC GACGGCGACGGCGCCGCGCGGCGCGGAGTATAA

Peptide Sequence

PEP ID	Os02t0218800-01
PEP Infomation	pep chromosome:IRGSP-1.0:2:6637973:6639828:1 gene:Os02g0218800 transcript:Os02t0218800-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ALLENE OXIDE SYNTHASE 4 description:Allene oxide synthase (CYP74A4), Fatty acid 9-/13-hydroperoxide lyase (CYP74C), Biosynthesis of jasmonic acid (JA), Plant defense (Os02t0218800-01)
Sequence	MAPPRANSGDGNDGAVGGQSKLSPSGLLIREIPGGYGVPFLSPLRDRLDYYYFQGADEFF RSRVARHGGATVLRVNMPPGPFLAGDPRVVALLDARSFRVLLDDSMVDKADTLDGTFMPS LALFGGHRPLAFLDAADPRHAKIKRVVMSLAAARMHHVAPAFRAAFAAMFDEVDAGLVAG GPVEFNKLNMRYMLDFTCAALFGGAPPSKAMGDAAVTKAVKWLIFQLHPLASKVVKPWPL EDLLLHTFRLPPFLVRREYGEITAYFAAAAAAILDDAEKNHPGIPRDELLHNLVFVAVFN AYGGFKIFLPHIVKWLARAGPELHAKLASEVRAAAPAGGGEITISAVEKEMPLVKSVVWE ALRMNPPVEFQYGRARRDMVVESHDAAYEVRKGELLFGYQPLATRDEKVFDRAGEFVPDR FVSGAGSAARPLLEHVVWSNGPETGTPSEGNKQCPGKDMVVAVGRLMVAGLFRRYDTFAA DVEELPLEPVVTFTSLTRAADGDGAARRGV

Transcript Sequence

Transcript ID	Os02t0218800-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:6637973:6639828:1 gene:Os02g0218800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ALLENE OXIDE SYNTHASE 4 description:Allene oxide synthase (CYP74A4), Fatty acid 9-/13-hydroperoxide lyase (CYP74C), Biosynthesis of jasmonic acid (JA), Plant defense (Os02t0218800-01)
Sequence	GTGGCTGTGACGATCCGACACCTGCACGCTAGTACGTAGTGCGTATACGTAGCCAGTACC CTACTCCCGTCCATGGCGCCGCCGCGAGCCAACTCCGGCGACGGTAACGACGGCGCCGTC GGAGGGCAGAGCAAGCTCTCGCCGTCGGGCCTGCTGATACGCGAGATTCCGGGCGGCTAC GGCGTGCCCTTCCTCTCGCCGCTGCGCGACCGCCTCGACTACTATTACTTCCAGGGCGCC GACGAGTTCTTCCGCTCACGCGTCGCCCGCCACGGCGGCGCCACCGTGCTCCGCGTCAAC ATGCCGCCCGGCCCCTTCCTCGCCGGCGACCCCCGCGTCGTCGCCCTCCTCGACGCGCGC AGCTTCCGCGTCCTCCTCGACGACTCCATGGTGGACAAGGCCGACACGCTCGACGGCACC TTCATGCCGTCGCTCGCGCTCTTCGGCGGCCACCGCCCGCTCGCCTTCCTCGACGCCGCC GACCCTCGCCACGCCAAGATCAAGCGCGTCGTGATGTCGCTCGCCGCGGCGAGGATGCAC CACGTCGCGCCGGCGTTCCGCGCCGCCTTCGCCGCCATGTTCGACGAGGTCGACGCCGGC CTCGTCGCCGGCGGCCCCGTCGAGTTCAACAAGCTCAACATGCGGTACATGCTCGACTTC ACCTGCGCCGCGCTGTTCGGCGGCGCGCCGCCGAGCAAGGCCATGGGCGACGCTGCCGTG ACGAAGGCGGTGAAGTGGCTCATCTTCCAGCTTCACCCGCTCGCCAGCAAGGTCGTCAAG CCGTGGCCGCTGGAGGACCTCCTCCTCCACACCTTCCGCCTGCCGCCGTTCCTGGTGCGC CGCGAGTACGGCGAGATCACGGCGTACTTCGCCGCCGCCGCCGCGGCCATCCTCGACGAC GCCGAGAAGAACCACCCGGGAATCCCGCGCGACGAGCTCCTCCACAACCTCGTGTTCGTC GCCGTCTTCAACGCCTACGGCGGCTTCAAGATCTTCCTGCCACACATCGTCAAGTGGCTC GCCCGCGCCGGCCCGGAGCTCCACGCCAAGCTAGCCTCCGAGGTCCGCGCCGCCGCGCCC GCCGGCGGCGGCGAGATCACCATCTCCGCCGTGGAGAAGGAGATGCCGCTGGTGAAGTCG GTGGTGTGGGAGGCGCTGCGCATGAACCCGCCGGTGGAGTTCCAGTACGGGCGCGCGCGG CGCGACATGGTCGTCGAGAGCCACGACGCGGCGTACGAGGTCCGCAAGGGGGAGCTGCTG TTCGGGTACCAGCCGCTCGCCACCCGCGACGAGAAGGTGTTCGACCGCGCCGGCGAGTTC GTCCCCGACCGGTTCGTCTCCGGCGCCGGAAGCGCCGCCCGGCCGCTGCTGGAGCACGTG GTGTGGTCGAACGGGCCGGAGACCGGGACGCCATCGGAGGGGAACAAGCAGTGCCCCGGG AAGGACATGGTGGTGGCGGTGGGGCGGCTGATGGTGGCGGGGCTGTTCCGGCGGTACGAC ACGTTCGCCGCCGACGTGGAGGAGCTGCCGCTTGAGCCGGTGGTCACGTTCACGTCGCTG ACCCGCGCCGCCGACGGCGACGGCGCCGCGCGGCGCGGAGTATAATAGTGTCAAGCGGCG GCGCGCGTGAGCGGCGAGTGTTGGTGCGGCGACGACGCTGTCCATGCATGGTCGCTGTCA GTTGGTCAGATTTGCATGGATTTCTTTTTTCTTTGACCTAAAAAAATTGGGAAAAAGGTG TACTTTCGCGTGCTTGTGGGGGCAGGTTCTTAAGTATAGGGATTCGGTTTGTCATTGTGT GAAGTTCAATACGATGTTTGAAGTTGAATAAAATTATGTGCGTTCCTCGTGGTTTT