Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0215200-02
CDS Infomation	cds chromosome:IRGSP-1.0:2:6447083:6453014:1 gene:Os02g0215200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CLASS-1 TYPE HISTONE DEACETYLASE 2 description:Class-I type histone deacetylase, Vegetative growth (Os02t0215200-01);Similar to Histone deacetylase. (Os02t0215200-02);Similar to Histone deacetylase. (Os02t0215200-03)
Sequence	ATGGACCCCTCGTCGGCGGGCGCCGGCGGCAACTCGCTGGCGTCGGCGTCGTGCGGCGAC GCGCAGAAGCGGCGGGTGTGCTACTTCTACGATCCGGAGGTGGGCAACTACTACTACGGG CAGGGTCACCCGATGAAGCCCCACCGCGTGAGGATGACCCACGCGCTGCTCGCCCACTAC GGCCTCCTCGCCCCGGCCAAGATGCAGGTGCTCCGCCCGCTCCCCGCCCGCGACCGCGAC CTCTGCCGCTTCCACTCCGACGACTACGTCGCCTTCCTCCGCGCCGTCACCCCGGAGACC CAGTTCGACCAGATCCGCTCCCTCCGCCGCTTCAACGTCGGCGAGGACTGCCCCGTCTTC GACGGCCTCTACGCCTACTGCCAGACCTACGCGGGGGCCTCCGTCGGCGCCGCCGTCAAG CTCAACCACGGCACCCACGACATCGCCATCAACTGGTCCGGCGGGTTGCACCACGCCAAG AAGTCCGAGGCCTCCGGCTTCTGCTACGTCAACGACATCGTCCTCGCCATCCTCGAGCTC CTCAAGCTCCATGAGCGAGTTCTGTATATTGATATTGATATCCATCATGGAGATGGAGTT GAGGAGGCATTCTACACAACAAACAGGGTTATGACAGTCTCATTTCACAAGTTTGGGGAT TATTTCCCGGGAACAGGGGACATCCGCGATATTGGGTATTCAGAAGGGAAGTATTACTGC CTGAATGTCCCGCTGGATGATGGAATTGATGATGACAGCTACCAGTCCATCTTCAAGCCG ATCATCAGCAAAGTCATGGAGATGTATCGTCCTGGTGCAGTCGTGCTTCAGTGCGGCGCT GATTCGTTGTCCGGTGATAGGTTGGGCTGTTTCAATCTCTCAGGCAAAGGTCATGCTGAA TGTGTTAAGTTCATGAGGTCTTTCAATGTTCCGTTGCTTCTTCTTGGTGGTGGTGGATAT ACCATAAGAAATGTTGCACGCTGCTGGTGTTACGAGACAGGAGTTGCACTTGGTGAAGAG CTACGGGAGAAGTTGCCTTATAACGAGTATTATGAATATTTTGGTCCAGAATACAGTCTT TACGTTGCAGCAAGTAACATGGAGAACAGAAATACAAACAAGCAATTGGAGGAAATAAAA TGCAACATTCTGGACAATCTCTCAAAACTTCAACATGCTCCTAGTGTCCAATTTGAAGAG CGAATTCCTGAAACAAAGCTACCTGAGCCAGATGAAGATCAAGATGATCCAGATGAAAGG CACGACCCTGACTCTGATATGCTGTTGGATGATCACAAACCTATGGGACACTCAGCAAGA AGCCTTATTCACAACATCGGAGTTAAGAGAGAAATTACTGAAACAGAGACCAAAGATCAG CATGGTAAGAGATTAACAACTGAACATAAAGTACCAGAACCGATGGCAGACGATCTTGGT TCCTCCAAGCAAGTTCCTACTGCGGATGCAAATTCGATGGCCATCAACGCGCCAGGCAAC GCCAAGAATGAACCGGGAAGCTCACTATGA

Peptide Sequence

PEP ID	Os02t0215200-02
PEP Infomation	pep chromosome:IRGSP-1.0:2:6447083:6453014:1 gene:Os02g0215200 transcript:Os02t0215200-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CLASS-1 TYPE HISTONE DEACETYLASE 2 description:Class-I type histone deacetylase, Vegetative growth (Os02t0215200-01);Similar to Histone deacetylase. (Os02t0215200-02);Similar to Histone deacetylase. (Os02t0215200-03)
Sequence	MDPSSAGAGGNSLASASCGDAQKRRVCYFYDPEVGNYYYGQGHPMKPHRVRMTHALLAHY GLLAPAKMQVLRPLPARDRDLCRFHSDDYVAFLRAVTPETQFDQIRSLRRFNVGEDCPVF DGLYAYCQTYAGASVGAAVKLNHGTHDIAINWSGGLHHAKKSEASGFCYVNDIVLAILEL LKLHERVLYIDIDIHHGDGVEEAFYTTNRVMTVSFHKFGDYFPGTGDIRDIGYSEGKYYC LNVPLDDGIDDDSYQSIFKPIISKVMEMYRPGAVVLQCGADSLSGDRLGCFNLSGKGHAE CVKFMRSFNVPLLLLGGGGYTIRNVARCWCYETGVALGEELREKLPYNEYYEYFGPEYSL YVAASNMENRNTNKQLEEIKCNILDNLSKLQHAPSVQFEERIPETKLPEPDEDQDDPDER HDPDSDMLLDDHKPMGHSARSLIHNIGVKREITETETKDQHGKRLTTEHKVPEPMADDLG SSKQVPTADANSMAINAPGNAKNEPGSSL

Transcript Sequence

Transcript ID	Os02t0215200-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:6447083:6453014:1 gene:Os02g0215200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CLASS-1 TYPE HISTONE DEACETYLASE 2 description:Class-I type histone deacetylase, Vegetative growth (Os02t0215200-01);Similar to Histone deacetylase. (Os02t0215200-02);Similar to Histone deacetylase. (Os02t0215200-03)
Sequence	GGCATCGCTCGCCTCCTCTGCTTCGCTTCCTTCTCCAGCAAGCACCCGACCACAACACAC ACGCGAGCTCCTCGACCTCGAGAGAGAGAGAAAACCCAACCCCGAATTCGGCGGCGGAGG CGGAGGCAGCGGCGATGGACCCCTCGTCGGCGGGCGCCGGCGGCAACTCGCTGGCGTCGG CGTCGTGCGGCGACGCGCAGAAGCGGCGGGTGTGCTACTTCTACGATCCGGAGGTGGGCA ACTACTACTACGGGCAGGGTCACCCGATGAAGCCCCACCGCGTGAGGATGACCCACGCGC TGCTCGCCCACTACGGCCTCCTCGCCCCGGCCAAGATGCAGGTGCTCCGCCCGCTCCCCG CCCGCGACCGCGACCTCTGCCGCTTCCACTCCGACGACTACGTCGCCTTCCTCCGCGCCG TCACCCCGGAGACCCAGTTCGACCAGATCCGCTCCCTCCGCCGCTTCAACGTCGGCGAGG ACTGCCCCGTCTTCGACGGCCTCTACGCCTACTGCCAGACCTACGCGGGGGCCTCCGTCG GCGCCGCCGTCAAGCTCAACCACGGCACCCACGACATCGCCATCAACTGGTCCGGCGGGT TGCACCACGCCAAGAAGTCCGAGGCCTCCGGCTTCTGCTACGTCAACGACATCGTCCTCG CCATCCTCGAGCTCCTCAAGCTCCATGAGCGAGTTCTGTATATTGATATTGATATCCATC ATGGAGATGGAGTTGAGGAGGCATTCTACACAACAAACAGGGTTATGACAGTCTCATTTC ACAAGTTTGGGGATTATTTCCCGGGAACAGGGGACATCCGCGATATTGGGTATTCAGAAG GGAAGTATTACTGCCTGAATGTCCCGCTGGATGATGGAATTGATGATGACAGCTACCAGT CCATCTTCAAGCCGATCATCAGCAAAGTCATGGAGATGTATCGTCCTGGTGCAGTCGTGC TTCAGTGCGGCGCTGATTCGTTGTCCGGTGATAGGTTGGGCTGTTTCAATCTCTCAGGCA AAGGTCATGCTGAATGTGTTAAGTTCATGAGGTCTTTCAATGTTCCGTTGCTTCTTCTTG GTGGTGGTGGATATACCATAAGAAATGTTGCACGCTGCTGGTGTTACGAGACAGGAGTTG CACTTGGTGAAGAGCTACGGGAGAAGTTGCCTTATAACGAGTATTATGAATATTTTGGTC CAGAATACAGTCTTTACGTTGCAGCAAGTAACATGGAGAACAGAAATACAAACAAGCAAT TGGAGGAAATAAAATGCAACATTCTGGACAATCTCTCAAAACTTCAACATGCTCCTAGTG TCCAATTTGAAGAGCGAATTCCTGAAACAAAGCTACCTGAGCCAGATGAAGATCAAGATG ATCCAGATGAAAGGCACGACCCTGACTCTGATATGCTGTTGGATGATCACAAACCTATGG GACACTCAGCAAGAAGCCTTATTCACAACATCGGAGTTAAGAGAGAAATTACTGAAACAG AGACCAAAGATCAGCATGGTAAGAGATTAACAACTGAACATAAAGTACCAGAACCGATGG CAGACGATCTTGGTTCCTCCAAGCAAGTTCCTACTGCGGATGCAAATTCGATGGCCATCA ACGCGCCAGGCAACGCCAAGAATGAACCGGGAAGCTCACTATGAACTAACCCACTTCAGG CCACCAGCTCTTATGCCACGGATTCCTGCATGCTATTAGTTACTTACTCCGAGGTGTTGT ATGACTGTTTCTTCTGTAGGAGTTTACAAATTACAACTGTTTCTTTTGTTGAAGAATTCC AAAGTGTCCAGGCAATACTGGACGTGGAGACATTAGTCTGATCAATGTACTGCAGAGTAC AGAACATGTAACATGAACCAAGTTACAGTGTATAGTCTTTTAGACTGTTAGATGGAACTT TCAGGCGAAATGCCTGTGCCT