Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0214400-01
CDS Infomation	cds chromosome:IRGSP-1.0:2:6399412:6402186:-1 gene:Os02g0214400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Pectate lyase homolog (EC 4.2.2.2) (Fragment). (Os02t0214400-01)
Sequence	ATGGATGACCAGAGGCTCCAGTGGAGGAAGCCCGGCTCCTTCCTCCTCGTCGCCGGCGTG TTCCTGGCGGCGGCGGCCGCTGTGTCGAACGCCGGCATAGGCGAGTTCGACGAGCATTGG GAGAAGCGCAGGGCGGCGGCGGAGGCGGCGGCGGAGGAGGTGTACAAACCGGACCCCTTC AATGTCACCAACGAGTTCAACCACGCTGTCATCAGATCGACGGAGCGCGGCGTTCTCCGG CGAGAGTTGAGTGGGAAGAACAGCAAGTACAAGGGGCCGTGCCTGGCGACGAACCCGATC GACCGGTGCTGGCGCTGCCGCAAGGACTGGGCCACCGACCGGAAGCGGCTCGCCCGGTGC GCCATGGGCTTCGGCCGCGGCGCCACCGGCGGCGTCCGCGGCAAGATCTACGTCGTCACC GACCCCGGCGACGGCGACGCCGCCAACCCGCGCTACGGCACGCTCCGGTGGGGCGCCATG CAGGCGGCGCCGCTGTGGATCACCTTCGCCAAGTCCATGGTGATCCGCCTCACGCAGGAG CTCCTCGTCGCCAGCGACAAGACCATCGACGGCCGCGGCGCGCAGGTGCACATCGCGCGC GGCGGCGCCGGGATCACCGTCCAGTTCGCCCGCAACGTGATCATCACCAGCCTCCACGTC CACGACGTGAAGCACAGCGACGGCGGCGCGGTCCGCGACTCGCCGACGCACATCGGCCCC CGCACGCGGGCCGACGGCGACGGCATCTCGCTCTTCGCCGCCACCGACGTGTGGGTGGAC CACGTCTCCATGTCCATGTGCGAGGACGGGCTCATCGACGTCGTGCAGGGCTCGACGGGG GTGACCATCTCCAACAGCCACTTCACCAACCACAACGACGTCATGCTGTTCGGCGCCAGC GACTCGTACCCGCAGGATAAGGTGATGCAGATCACCGTGGCGTTCAACCACTTCGGCCGT GGGCTCGTGCAGCGGATGCCGCGATGCCGGTGGGGGTTCTTCCACGTCGTCAACAACGAC TACACGCACTGGCTCATGTACGCCATCGGCGGCGGCATGAGCCCTACCATCCTCAGCCAG GGCAACCGATACATCGCCCCTCCCAACATCGCCGCCAAACTGATCACGAGGCACTATGCG CCGGAGTGGGAGTGGAAGAACTGGGCGTGGCGCTCGGACGGAGACCTGTTCATGAACGGC GCCTACTTCCAGGCGTCCAACGGCGCCATCAACAGGAAGGTGAAGGGCTCCGACATGGTT AAGCCCAAGCCAGGCTCCTACGTCAGGAGGCTCACACGCTTCGCCGGCGCGCTCTCCTGC CGGCCCGGCGAGCCGTGCTGA

Peptide Sequence

PEP ID	Os02t0214400-01
PEP Infomation	pep chromosome:IRGSP-1.0:2:6399412:6402186:-1 gene:Os02g0214400 transcript:Os02t0214400-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Pectate lyase homolog (EC 4.2.2.2) (Fragment). (Os02t0214400-01)
Sequence	MDDQRLQWRKPGSFLLVAGVFLAAAAAVSNAGIGEFDEHWEKRRAAAEAAAEEVYKPDPF NVTNEFNHAVIRSTERGVLRRELSGKNSKYKGPCLATNPIDRCWRCRKDWATDRKRLARC AMGFGRGATGGVRGKIYVVTDPGDGDAANPRYGTLRWGAMQAAPLWITFAKSMVIRLTQE LLVASDKTIDGRGAQVHIARGGAGITVQFARNVIITSLHVHDVKHSDGGAVRDSPTHIGP RTRADGDGISLFAATDVWVDHVSMSMCEDGLIDVVQGSTGVTISNSHFTNHNDVMLFGAS DSYPQDKVMQITVAFNHFGRGLVQRMPRCRWGFFHVVNNDYTHWLMYAIGGGMSPTILSQ GNRYIAPPNIAAKLITRHYAPEWEWKNWAWRSDGDLFMNGAYFQASNGAINRKVKGSDMV KPKPGSYVRRLTRFAGALSCRPGEPC

Transcript Sequence

Transcript ID	Os02t0214400-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:6399412:6402186:-1 gene:Os02g0214400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Pectate lyase homolog (EC 4.2.2.2) (Fragment). (Os02t0214400-01)
Sequence	GCACGTTAGCAATAGGGTTCTTTCATTTTCCCCAAAAAAAATCCAACCCTATTAAGTTTT TTTTTTATTTAAACAATCAAGAAAAGAAAAAAAGAGAAACAAAGTTTCATGACAAATAGT ATATAGTTATAGACAAAGAGAATAATATATAGGAAGATATATATCCATGGATGACCAGAG GCTCCAGTGGAGGAAGCCCGGCTCCTTCCTCCTCGTCGCCGGCGTGTTCCTGGCGGCGGC GGCCGCTGTGTCGAACGCCGGCATAGGCGAGTTCGACGAGCATTGGGAGAAGCGCAGGGC GGCGGCGGAGGCGGCGGCGGAGGAGGTGTACAAACCGGACCCCTTCAATGTCACCAACGA GTTCAACCACGCTGTCATCAGATCGACGGAGCGCGGCGTTCTCCGGCGAGAGTTGAGTGG GAAGAACAGCAAGTACAAGGGGCCGTGCCTGGCGACGAACCCGATCGACCGGTGCTGGCG CTGCCGCAAGGACTGGGCCACCGACCGGAAGCGGCTCGCCCGGTGCGCCATGGGCTTCGG CCGCGGCGCCACCGGCGGCGTCCGCGGCAAGATCTACGTCGTCACCGACCCCGGCGACGG CGACGCCGCCAACCCGCGCTACGGCACGCTCCGGTGGGGCGCCATGCAGGCGGCGCCGCT GTGGATCACCTTCGCCAAGTCCATGGTGATCCGCCTCACGCAGGAGCTCCTCGTCGCCAG CGACAAGACCATCGACGGCCGCGGCGCGCAGGTGCACATCGCGCGCGGCGGCGCCGGGAT CACCGTCCAGTTCGCCCGCAACGTGATCATCACCAGCCTCCACGTCCACGACGTGAAGCA CAGCGACGGCGGCGCGGTCCGCGACTCGCCGACGCACATCGGCCCCCGCACGCGGGCCGA CGGCGACGGCATCTCGCTCTTCGCCGCCACCGACGTGTGGGTGGACCACGTCTCCATGTC CATGTGCGAGGACGGGCTCATCGACGTCGTGCAGGGCTCGACGGGGGTGACCATCTCCAA CAGCCACTTCACCAACCACAACGACGTCATGCTGTTCGGCGCCAGCGACTCGTACCCGCA GGATAAGGTGATGCAGATCACCGTGGCGTTCAACCACTTCGGCCGTGGGCTCGTGCAGCG GATGCCGCGATGCCGGTGGGGGTTCTTCCACGTCGTCAACAACGACTACACGCACTGGCT CATGTACGCCATCGGCGGCGGCATGAGCCCTACCATCCTCAGCCAGGGCAACCGATACAT CGCCCCTCCCAACATCGCCGCCAAACTGATCACGAGGCACTATGCGCCGGAGTGGGAGTG GAAGAACTGGGCGTGGCGCTCGGACGGAGACCTGTTCATGAACGGCGCCTACTTCCAGGC GTCCAACGGCGCCATCAACAGGAAGGTGAAGGGCTCCGACATGGTTAAGCCCAAGCCAGG CTCCTACGTCAGGAGGCTCACACGCTTCGCCGGCGCGCTCTCCTGCCGGCCCGGCGAGCC GTGCTGATCCGCCGGCGAGATGACGTCACGTAGGCATGCAGCATGAGCGACCACGGAGAT CATCATCATCAAGAAAAAAAATATAATGGGGAAAGAAAATTAAACATTTGGACGACATAG AAGGGTGACAAATGGAAGGGTAGCCAGGTTAAATTTCCTGTCCATTTTGTCTTGAAATTG AGTGAATTTTGGTATGTTCGTATTTTCAAGAGGGGCCAGGGATTATCCACAACATGTACT ATCTCTATGTATAATGTAATACAGCATGGATGTAACGATTGCTCTTTGCGATCACCAATG ACCAAAAAAATGTAAAATATTGTT