Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0210700-01
CDS Infomation	cds chromosome:IRGSP-1.0:2:6183755:6187803:1 gene:Os02g0210700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein kinase, core domain containing protein. (Os02t0210700-01)
Sequence	ATGCTTCCTGAAGCTTACATCACAAGCACAAGTAGCTGCAGCCACACCAGTAGTATGATC AGCCCAACTAGTCCTGCACTGTTTCTAGTCCTCCTTGCCTTGACATGTTCATGGCCATCG TCATCATCAGCAGGTCATGGCGACGGCAATGACATTGATCGGCAGGCTCTCCTTTCCTTC AGGTCTCTGGTCTCTGATCCAGCCAGAGCCCTAGAGTCATGGAGGATCACCTCTCTCGAC TTCTGCCACTGGCATGGCGTGACCTGCAGTACGACGATGCCAGGCCGCGTGACCGTGCTA GACCTCAGCTCCTGTCAGCTCGATGGCCTTATACCTCCGTGCATAGCCAACTTGAGCTCC ATTGAGAGGCTTGATCTGTCGAACAATAGCTTTCACGGGCGTATACCAGCTGAGCTTAGC CGCCTGGAACAACTACGACACCTCAACCTGAGTGTCAATTCGCTCGATGGCCGCATCCCA GCCGAGTTATCTTCCTGTAGCCGTCTCGAAGTCCTGAGCTTGTGGAACAACTCCCTCCAA GGTGAGATCCCTGCAAGCCTAGCCCAACTCGTTCATATCCAGCTCATAGACCTGTCAAAC AACAAGCTGCAAGGAAGCATTCCTAGTGGGTTTGGCACACTTCGTGAGCTGAAAATTCTG AACCTTGCCACCAATACTTTGGTGGGTAACATACCGTGGTTGTTGGGCAGTGGCTCATCT CTCACGTATGTTGATCTGGGAGGAAATGGCCTCTCTGAAGGAATCCCCGAGTTCTTGGCG AATAGCTCATCTCTCCAATTTCTTAGCCTGACACAAAATAAACTTACAGGAGCGCTGCCA CGAGCTCTCTTCAACACGTCCTCTCTGACAGCCATTTACCTCGACAGGAACAAATTAATT GGTTCCATACCACCTGTTACAGCAGTTGCTGCACCTATTCAATACCTCAGTCTAGCAGAG AATAACCTCACTAGTGAGATACCTGCCTCAATAGGGAACCTTTCCTCTCTTGTTGGTGTT TCCCTTGCAGCAAATAACCTTGTGGGAAGCATCCCTGAGAGCCTAAGTAGAATCCCAACT CTCGAGATGCTAATACTCTCAATCAACAACTTGTCGGGTCAGGTACCCCAGTCTATTTTC AATATATCATCTCTGAAATATCTAGAATTGGCCAACAACTCACTCATAGGACGACTGCCA CCAGATATTGGCTACAAGCTTCCAAACCTTCAGAGATTGATCCTATCAAAAACACGTTTG AGTGGACCAATCCCAGCTTCTCTTGTTAATGCTTCTAAGCTAGAAATAATTCATCTTGTT GATATTGGGCTCACTGGAATACTGCCATCCTTTGGTTCCTTGTCACACTTGCAACAACTT GATCTCGCATATAACCAGCTTGAGGCGGGTGACTGGAGCTTCCTCTCATCCCTTGCAAAC TGCACTCAGCTGCAAAGACTCTGCTTGGATGGGAATGGACTGCAAGGACACTTGCCAAGC TCAGTTGGTAATCTTCCCTCGGAGCTCAAGTGGCTCTGGCTCAAGCAAAACAAACTTTCT GGGACAATTCCCTTGGAGATTGGAAACCTTAGGAGCCTCGAAGTGCTGTATATGGATCAA AATTTGTTCACTGGTACAATCCCTCCTTCCGTAGGAAATCTAAGCAACTTACTGGTTCTA AGCTTTGCACAAAATAATCTCTCTGGCCATGTTCCTGATTCCATTGGCAACCTTGTAAAA CTAACCGAGTTATATTTGGATGGAAACAACTTCAGTGGGACTATACCAGCAAGTTTAGGG CAATGGAGACATTTAGAGAAGTTGAATCTTTCTCACAATTCATTTGGTGGAAGCATACCA AGCGAGGTATTTAATATTTCTTCACTGTCACAAAGCTTGGACTTGTCGCATAATTCCTTT GCTGGGCCTATACCACTGGAGATTGGAGGTCTCATAAATCTTGGCAGCCTTAGCATTTCC AACAACCGCCTCACTAGCAACATTCCATCCACTCTCGGAAAGTGTGTGCTTCTAGAGTCC CTTCACATGGAAGAAAATCTCCTTGTAGGAAGCATTCCACATTTTCTCATGAATTTAAGA AGCATCAAGGAGTTGGATCTCTCTTCAAACAACTTATCAGGGAGCATTCCAGATTTTTTT GCATCCATGAATTATTTGAAGGATCTTAATCTATCTTTTAATGATTTTGATGGACCTGTT CCATCAACCGGCATTTTCAGAAATGCTAGCAGGGTGTCCCTTCAAGGAAATGACGGTTTA TGTGCCAACACCCCAGAGTTAGGGCTGCCTCATTGTCCTGCATTAGACAGAAGAACAAAG CATAAGTCCATTATTTTAATGATAGTGGTTCCAATTGCTGCCATTGTTCTTGTAATTTCA CTGATCTGTTTACTCACTGTCTGCTTGAAAAGAAGAGAAGAAAAGCCAATATTGACAGAC ATTAGCATGGATACGAAGATAATTTCATATAAAGACATTGTCCAAGCAACGAAAGGGTTC TCTACTGAAAACTTGGTTGGTTCAGGATCCTTTGGAGATGTTTACAAGGGCACCTTGGAG CTTGAGGTTGATCTAGTAGCTATTAAAGTTTTCAATCTCAATAGGCATGGAGGACCTTCA AGCTTTATTGCAGAGTGTGAAGCCTTGAAAAACATCCGACATCGCAATCTTGTCAAAGTC ATCACCTTATGTTCAACCTTGGATCCCAAAGGAGAAGAATTCAAAGCAATCATCTTTCAA TATATGCCTAATGGAAGCCTAGAAACATGGCTGCATCAGAAAGTCTATGATCATAATCAG AAACAAGTCTTAACTTTGGGTGATCGGATTAGCATAGCTCTGGATATAGCATATGCTTTA GATTATCTTCACAACCAGTCTGCATCTCCACTAATACATTGTGACCTTAAGCCAAGCAAT GTGCTGTTAGATCTACAGATGACGGCATATGTCAGTGATTTTGGATTGGCAAGATTCATG TGCACTACAACTGCAGCATGCGCCAATTCAACTAGTTTGGCTGATTTGAAAGGATCCATC GGATATATTGCACCAGAGTACGGAATGGGTGGACCTATCTCAACCAAGGGCGATGCCTAC AGCTATGGAGTGCTCTTATTAGAGATATTAACTGGGAAGCGTCCAAGTGATGACAAATTG AAGGATGGCTTAAGCCTTCATGAACTCGTGGAGTCAGCATTTCCACACAAACTAGATGAG ATTTTGGATCCCATTATGCTGCAGAGTGACCTAAATGGAGGAAAATATCATACTGAAATA ATGCAGAGTTGCATCATACCAATGGTTAAGCTGGGTCTGTTGTGTTCGTCCATATCACCA AAAGACCGATTAGGAATGTCACAGGTTTCTGCCGAAATGGGCACAATAAGACAGTCATTT CTTGAGTTACAATGA

Peptide Sequence

PEP ID	Os02t0210700-01
PEP Infomation	pep chromosome:IRGSP-1.0:2:6183755:6187803:1 gene:Os02g0210700 transcript:Os02t0210700-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein kinase, core domain containing protein. (Os02t0210700-01)
Sequence	MLPEAYITSTSSCSHTSSMISPTSPALFLVLLALTCSWPSSSSAGHGDGNDIDRQALLSF RSLVSDPARALESWRITSLDFCHWHGVTCSTTMPGRVTVLDLSSCQLDGLIPPCIANLSS IERLDLSNNSFHGRIPAELSRLEQLRHLNLSVNSLDGRIPAELSSCSRLEVLSLWNNSLQ GEIPASLAQLVHIQLIDLSNNKLQGSIPSGFGTLRELKILNLATNTLVGNIPWLLGSGSS LTYVDLGGNGLSEGIPEFLANSSSLQFLSLTQNKLTGALPRALFNTSSLTAIYLDRNKLI GSIPPVTAVAAPIQYLSLAENNLTSEIPASIGNLSSLVGVSLAANNLVGSIPESLSRIPT LEMLILSINNLSGQVPQSIFNISSLKYLELANNSLIGRLPPDIGYKLPNLQRLILSKTRL SGPIPASLVNASKLEIIHLVDIGLTGILPSFGSLSHLQQLDLAYNQLEAGDWSFLSSLAN CTQLQRLCLDGNGLQGHLPSSVGNLPSELKWLWLKQNKLSGTIPLEIGNLRSLEVLYMDQ NLFTGTIPPSVGNLSNLLVLSFAQNNLSGHVPDSIGNLVKLTELYLDGNNFSGTIPASLG QWRHLEKLNLSHNSFGGSIPSEVFNISSLSQSLDLSHNSFAGPIPLEIGGLINLGSLSIS NNRLTSNIPSTLGKCVLLESLHMEENLLVGSIPHFLMNLRSIKELDLSSNNLSGSIPDFF ASMNYLKDLNLSFNDFDGPVPSTGIFRNASRVSLQGNDGLCANTPELGLPHCPALDRRTK HKSIILMIVVPIAAIVLVISLICLLTVCLKRREEKPILTDISMDTKIISYKDIVQATKGF STENLVGSGSFGDVYKGTLELEVDLVAIKVFNLNRHGGPSSFIAECEALKNIRHRNLVKV ITLCSTLDPKGEEFKAIIFQYMPNGSLETWLHQKVYDHNQKQVLTLGDRISIALDIAYAL DYLHNQSASPLIHCDLKPSNVLLDLQMTAYVSDFGLARFMCTTTAACANSTSLADLKGSI GYIAPEYGMGGPISTKGDAYSYGVLLLEILTGKRPSDDKLKDGLSLHELVESAFPHKLDE ILDPIMLQSDLNGGKYHTEIMQSCIIPMVKLGLLCSSISPKDRLGMSQVSAEMGTIRQSF LELQ

Transcript Sequence

Transcript ID	Os02t0210700-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:6183755:6187803:1 gene:Os02g0210700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein kinase, core domain containing protein. (Os02t0210700-01)
Sequence	GCCATCCGAGACTGAAGAGCGTAATTTATTCGGAAAACATTTGTAGGGAAGATGGGGTAC GTACCTAACTTTGATCGAAACATTCAAAACCAATCCACAATGCTGGTTTCTGAATCCCAG CAGATGATACCGTTGATCTGAACAAGTTGCCAGCCAGTCAAGTGAGCAAGGTGCTTAGCC ATATAAAAGAAGCACGCATGCTTCCTGAAGCTTACATCACAAGCACAAGTAGCTGCAGCC ACACCAGTAGTATGATCAGCCCAACTAGTCCTGCACTGTTTCTAGTCCTCCTTGCCTTGA CATGTTCATGGCCATCGTCATCATCAGCAGGTCATGGCGACGGCAATGACATTGATCGGC AGGCTCTCCTTTCCTTCAGGTCTCTGGTCTCTGATCCAGCCAGAGCCCTAGAGTCATGGA GGATCACCTCTCTCGACTTCTGCCACTGGCATGGCGTGACCTGCAGTACGACGATGCCAG GCCGCGTGACCGTGCTAGACCTCAGCTCCTGTCAGCTCGATGGCCTTATACCTCCGTGCA TAGCCAACTTGAGCTCCATTGAGAGGCTTGATCTGTCGAACAATAGCTTTCACGGGCGTA TACCAGCTGAGCTTAGCCGCCTGGAACAACTACGACACCTCAACCTGAGTGTCAATTCGC TCGATGGCCGCATCCCAGCCGAGTTATCTTCCTGTAGCCGTCTCGAAGTCCTGAGCTTGT GGAACAACTCCCTCCAAGGTGAGATCCCTGCAAGCCTAGCCCAACTCGTTCATATCCAGC TCATAGACCTGTCAAACAACAAGCTGCAAGGAAGCATTCCTAGTGGGTTTGGCACACTTC GTGAGCTGAAAATTCTGAACCTTGCCACCAATACTTTGGTGGGTAACATACCGTGGTTGT TGGGCAGTGGCTCATCTCTCACGTATGTTGATCTGGGAGGAAATGGCCTCTCTGAAGGAA TCCCCGAGTTCTTGGCGAATAGCTCATCTCTCCAATTTCTTAGCCTGACACAAAATAAAC TTACAGGAGCGCTGCCACGAGCTCTCTTCAACACGTCCTCTCTGACAGCCATTTACCTCG ACAGGAACAAATTAATTGGTTCCATACCACCTGTTACAGCAGTTGCTGCACCTATTCAAT ACCTCAGTCTAGCAGAGAATAACCTCACTAGTGAGATACCTGCCTCAATAGGGAACCTTT CCTCTCTTGTTGGTGTTTCCCTTGCAGCAAATAACCTTGTGGGAAGCATCCCTGAGAGCC TAAGTAGAATCCCAACTCTCGAGATGCTAATACTCTCAATCAACAACTTGTCGGGTCAGG TACCCCAGTCTATTTTCAATATATCATCTCTGAAATATCTAGAATTGGCCAACAACTCAC TCATAGGACGACTGCCACCAGATATTGGCTACAAGCTTCCAAACCTTCAGAGATTGATCC TATCAAAAACACGTTTGAGTGGACCAATCCCAGCTTCTCTTGTTAATGCTTCTAAGCTAG AAATAATTCATCTTGTTGATATTGGGCTCACTGGAATACTGCCATCCTTTGGTTCCTTGT CACACTTGCAACAACTTGATCTCGCATATAACCAGCTTGAGGCGGGTGACTGGAGCTTCC TCTCATCCCTTGCAAACTGCACTCAGCTGCAAAGACTCTGCTTGGATGGGAATGGACTGC AAGGACACTTGCCAAGCTCAGTTGGTAATCTTCCCTCGGAGCTCAAGTGGCTCTGGCTCA AGCAAAACAAACTTTCTGGGACAATTCCCTTGGAGATTGGAAACCTTAGGAGCCTCGAAG TGCTGTATATGGATCAAAATTTGTTCACTGGTACAATCCCTCCTTCCGTAGGAAATCTAA GCAACTTACTGGTTCTAAGCTTTGCACAAAATAATCTCTCTGGCCATGTTCCTGATTCCA TTGGCAACCTTGTAAAACTAACCGAGTTATATTTGGATGGAAACAACTTCAGTGGGACTA TACCAGCAAGTTTAGGGCAATGGAGACATTTAGAGAAGTTGAATCTTTCTCACAATTCAT TTGGTGGAAGCATACCAAGCGAGGTATTTAATATTTCTTCACTGTCACAAAGCTTGGACT TGTCGCATAATTCCTTTGCTGGGCCTATACCACTGGAGATTGGAGGTCTCATAAATCTTG GCAGCCTTAGCATTTCCAACAACCGCCTCACTAGCAACATTCCATCCACTCTCGGAAAGT GTGTGCTTCTAGAGTCCCTTCACATGGAAGAAAATCTCCTTGTAGGAAGCATTCCACATT TTCTCATGAATTTAAGAAGCATCAAGGAGTTGGATCTCTCTTCAAACAACTTATCAGGGA GCATTCCAGATTTTTTTGCATCCATGAATTATTTGAAGGATCTTAATCTATCTTTTAATG ATTTTGATGGACCTGTTCCATCAACCGGCATTTTCAGAAATGCTAGCAGGGTGTCCCTTC AAGGAAATGACGGTTTATGTGCCAACACCCCAGAGTTAGGGCTGCCTCATTGTCCTGCAT TAGACAGAAGAACAAAGCATAAGTCCATTATTTTAATGATAGTGGTTCCAATTGCTGCCA TTGTTCTTGTAATTTCACTGATCTGTTTACTCACTGTCTGCTTGAAAAGAAGAGAAGAAA AGCCAATATTGACAGACATTAGCATGGATACGAAGATAATTTCATATAAAGACATTGTCC AAGCAACGAAAGGGTTCTCTACTGAAAACTTGGTTGGTTCAGGATCCTTTGGAGATGTTT ACAAGGGCACCTTGGAGCTTGAGGTTGATCTAGTAGCTATTAAAGTTTTCAATCTCAATA GGCATGGAGGACCTTCAAGCTTTATTGCAGAGTGTGAAGCCTTGAAAAACATCCGACATC GCAATCTTGTCAAAGTCATCACCTTATGTTCAACCTTGGATCCCAAAGGAGAAGAATTCA AAGCAATCATCTTTCAATATATGCCTAATGGAAGCCTAGAAACATGGCTGCATCAGAAAG TCTATGATCATAATCAGAAACAAGTCTTAACTTTGGGTGATCGGATTAGCATAGCTCTGG ATATAGCATATGCTTTAGATTATCTTCACAACCAGTCTGCATCTCCACTAATACATTGTG ACCTTAAGCCAAGCAATGTGCTGTTAGATCTACAGATGACGGCATATGTCAGTGATTTTG GATTGGCAAGATTCATGTGCACTACAACTGCAGCATGCGCCAATTCAACTAGTTTGGCTG ATTTGAAAGGATCCATCGGATATATTGCACCAGAGTACGGAATGGGTGGACCTATCTCAA CCAAGGGCGATGCCTACAGCTATGGAGTGCTCTTATTAGAGATATTAACTGGGAAGCGTC CAAGTGATGACAAATTGAAGGATGGCTTAAGCCTTCATGAACTCGTGGAGTCAGCATTTC CACACAAACTAGATGAGATTTTGGATCCCATTATGCTGCAGAGTGACCTAAATGGAGGAA AATATCATACTGAAATAATGCAGAGTTGCATCATACCAATGGTTAAGCTGGGTCTGTTGT GTTCGTCCATATCACCAAAAGACCGATTAGGAATGTCACAGGTTTCTGCCGAAATGGGCA CAATAAGACAGTCATTTCTTGAGTTACAATGAGAACAAGGAGCTAGCTGCGATGGTAAAT AGTACTGACAATTGCAGAAATCTTTTTGTTGAAATGATCATAATGGGACGTGCAATCTTG TTCTTTATGAGGAAGAAATAAAAACAAAAACAGATAGAGGTGAATGCATGAAAAATTCTA GCTCCAACTTTTGTTCCCCACCTAATAGTACCAATAGTTTCAGCTGTAATTTGGATGTTT GTACAACTACTTTTAATACACTTTGAGAGTTGTAACGAATTCCATTTGGTATTAAAAAAA TAATATTGGTCC