Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0208600-01
CDS Infomation	cds chromosome:IRGSP-1.0:2:6083116:6088700:1 gene:Os02g0208600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Transcription elongation factor S-II, central region domain containing protein. (Os02t0208600-01)
Sequence	ATGGAGTTGTCAAATCAAGGGCAGACACCCATGTCAACTAACATGGGTTCTCAACCATTG CCTTCTTCAAATATTCAACCTAATCAGGCTGAGTATCCGTCTATGTTTTATCCATCTTTG CCTGCTGACTGGGGTGCACAGCCAATGTTTTCTATGGGAGCTTCTGTTCCAATTAGTTCG TATTTTATTGTTCCTATGAGTCAACAATCGGTCCAAATTGGTGCTTCTAGGCCAGAGACT CCGCGTTCTTCAGGGGCACATTCTCTAAGCAGAGTATCATTGAGGCCACCCCAGCAAGTG CTAAGTATTCGAACATCTTTGCCAACAATGGTTGGATCACAACACTCTCCTGCTGGCAAG AAACTGCAACCGACAATTGCTTCTCCAAAGGTTCAAATACTGAAATCTACACAGTCACAG TCATCGAACAAACGTTCTGCACAGAAGGAGACACCATCAAAGGTTCAAACTCAGCAATTG GAATCTGTGAGATCAAAGTTCAGGGAGTCACTTTCTGCTGCTCTGAGAACAGATTCTGAT CAGAGTAAGAATCAATCTTCTGATGTGCAGCCTGATGGGTCTGCAGACCAAAAGAAAGAG ATGGATGTAGATGCAGATCAAGTGGCCACCACATCCCAAGGCATGAGTGCAGCCAAGTCG GAAGTATTGACAAGTGTTGGTGCTGAGAGGCGTGCTGAAGATGAGAAGTTAAACAGTGAT TTAGTTTCGAACATAGCCACACCATTAAACGCGGACATCCAGCAACAACCAGAGAATGCT TCTTTACAAGATGAAATGTTGGGACAATATACAGTTGTTGCTGATGAACTCTTGCAAGGT CATGGACTTTGTTGGGTTTCTGACTTTGATGCTGGGGTTCCTGAACCTGCCACACAACCT AATTTAAAAAGGTCCAGGGCTTCTGACATTGACCCTGTTGTTGCAGACACTCTCTCAGAA TCTGAGTCCAAAAGAATGAAGTCTGCCAATGATGAGGAAGCGATAGATAAGGATAGCATT ATTCAGAAGGCAGATGATTTAGCAGTTAGGGTTGAAGAGGAGCTGTTCAAACTATTTGGT GGAGTTAATAAGAAGTATAAGGAGAAAGGTAGATCTCTTCTATTTAATCTAAAAGATAAA AGTAATCCTGAGTTAAGAGAGAGGGTATTGTCTGGAGATATTACACCTGATCGCCTCTGT TCAATGACTGCGGAGGAACTTGCTTCCAAGGAGCTATCGGAGTGGCGGTTAGCTAAAGCT GAAGAACTAGCACAAATGGTTGTCCTTCCTAGTACCGAGGTTGATGTTAGACGTTTGGTT AGGAAAACACACAAAGGAGAATTTCAAGTTGAAGTAGAAGAAACAGATGGTATCTCAGTG GAGGTTGAGCTTGGAGGTAATCTTCTTACTCAAGTTCCATCAAAAGCCCCTGAAGATCAG ACCAAATCAGACGATAAAGAAAGTACAGATGATAAAACAGGCATACAAGACAATGACAAG GCACCTGATGGGACTTCACAAGATGAAGATAATGGGGCAGGCAAGAACGATCCACAAGAT GATTTAGAATATGTTGATAATGAGAAAAGTGACCTTATGCAAGAACTTATGGTGGATGAC TTGAAAGACACTGAAAACCTTCCACCGATCCCTTCACTAGATGAATTCATGCAAGGTTTA GATTCTGAACCACCTTTTGAAAATCTCTCAGCTGGGACGCCAGAAGAAGATTCAGATGAT CGAGACGAAGCTGACACTACTGCAGAATCTGCGGAACTTCCTGAGGAAGAAGTTAAAGTT TCTGCAGCAGAGAAGATTGTATCTGAAGCTGACCTGCCATCTTCGCAGGATAAATCTGAG TCCAAGTTAGAGTCACCCAAAGATGAGGTGGGTTCAAATTTGGGCCCTGTTGAGCAGCGT GAAGGAAAGCTGATAAAATCCTCCCCAGATAGTGTTGAAGTCAAACAAACAACTACTGAA AATGTGCTGAATCGTGACTCTACTGTGCATAATATGGCAACTACTCTTCCTATGATACGT GAAAGTATATGGGAGGGTGCAATTCAACTTACCATGTCTTCGCTCACAAATGTCGTTGCC ATCTTCAAAAGTGGTGAAAAGCCACCAGTAAAAGAATGGCGGAGCTTTGTTGAAATCAAG GGGAGAGTCAAACTTAGTGCCTTTCAAGAGTTTGTTGAACAGCTTCCCAAATCTAGGAGC CGTGCTATAATGGTAACTGAGTTGTGTTGGAAGGAAGGTTCTCATGAGAGTGGTCGCCAA CATCTCTTGCAGACAATTGACTCGTATATTTCAGATGAAAGAGTAGGGTTAGCTGAACCT GCAGATGGAATAGAGCTGTACCTGTGCCCTTCTCAAGGGAAAACTGTGGAGATTCTCTCT CGGCACCTGCCAAAGGAGCATTTGGAGAGTCTTGCTGTGTCAGCATCCTCCATCATCGGG GTCATCGTCTGGCGGAGGCCCAACGTTCCCAGGATGCCGGCACACCCTAGGCATGATGGT TCCCGGAGGCCGTCGATTTTAAAGAAACCGCAGGTTACTGGTTCTACTCCAGGCCCTAGG CCCTCCCTGCCTATGAGCTCGCACGGCGCGCCGCCGGGTTTTCCAGTTCAGCGTCACCGC CACGAGGAAGATGTAACTGATGATGTCCCTCCGGGCTTTGGCCCTGGTGTTGCTAGGGAT GAAGACGATCTTCCTGAATTTAATTTTGTTAACTCGTCC

Peptide Sequence

PEP ID	Os02t0208600-01
PEP Infomation	pep chromosome:IRGSP-1.0:2:6083116:6088700:1 gene:Os02g0208600 transcript:Os02t0208600-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Transcription elongation factor S-II, central region domain containing protein. (Os02t0208600-01)
Sequence	MELSNQGQTPMSTNMGSQPLPSSNIQPNQAEYPSMFYPSLPADWGAQPMFSMGASVPISS YFIVPMSQQSVQIGASRPETPRSSGAHSLSRVSLRPPQQVLSIRTSLPTMVGSQHSPAGK KLQPTIASPKVQILKSTQSQSSNKRSAQKETPSKVQTQQLESVRSKFRESLSAALRTDSD QSKNQSSDVQPDGSADQKKEMDVDADQVATTSQGMSAAKSEVLTSVGAERRAEDEKLNSD LVSNIATPLNADIQQQPENASLQDEMLGQYTVVADELLQGHGLCWVSDFDAGVPEPATQP NLKRSRASDIDPVVADTLSESESKRMKSANDEEAIDKDSIIQKADDLAVRVEEELFKLFG GVNKKYKEKGRSLLFNLKDKSNPELRERVLSGDITPDRLCSMTAEELASKELSEWRLAKA EELAQMVVLPSTEVDVRRLVRKTHKGEFQVEVEETDGISVEVELGGNLLTQVPSKAPEDQ TKSDDKESTDDKTGIQDNDKAPDGTSQDEDNGAGKNDPQDDLEYVDNEKSDLMQELMVDD LKDTENLPPIPSLDEFMQGLDSEPPFENLSAGTPEEDSDDRDEADTTAESAELPEEEVKV SAAEKIVSEADLPSSQDKSESKLESPKDEVGSNLGPVEQREGKLIKSSPDSVEVKQTTTE NVLNRDSTVHNMATTLPMIRESIWEGAIQLTMSSLTNVVAIFKSGEKPPVKEWRSFVEIK GRVKLSAFQEFVEQLPKSRSRAIMVTELCWKEGSHESGRQHLLQTIDSYISDERVGLAEP ADGIELYLCPSQGKTVEILSRHLPKEHLESLAVSASSIIGVIVWRRPNVPRMPAHPRHDG SRRPSILKKPQVTGSTPGPRPSLPMSSHGAPPGFPVQRHRHEEDVTDDVPPGFGPGVARD EDDLPEFNFVNSS

Transcript Sequence

Transcript ID	Os02t0208600-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:6083116:6088700:1 gene:Os02g0208600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Transcription elongation factor S-II, central region domain containing protein. (Os02t0208600-01)
Sequence	TCACCCAGTCATCACCCACCTCATCCATCCATCCACCACGCAGCAGCCGTTCACCTCACC ACCTCGCGCGGCGACGAGACGAGACGAACCAAATGGAAACCCGAAGCGCACAATCCGTGA CCTCTGCCCCTGCCCATAGCTAACCCTAAACCCCCAAATCGAATCCCCCACCTTCCCCGC AAATCTCCCAACCCCCCCCCCCCCTTCCCTCTCGCCGCCGTCGCCGTCGCCGCCCGGCGC CTAGATATATGTATTAACTGTTCTAAGCAACACAACTATTTCTCGTCAAGGATCTTGGGA GTTTTTGAAATAGTTGCATAATGGAGTTGTCAAATCAAGGGCAGACACCCATGTCAACTA ACATGGGTTCTCAACCATTGCCTTCTTCAAATATTCAACCTAATCAGGCTGAGTATCCGT CTATGTTTTATCCATCTTTGCCTGCTGACTGGGGTGCACAGCCAATGTTTTCTATGGGAG CTTCTGTTCCAATTAGTTCGTATTTTATTGTTCCTATGAGTCAACAATCGGTCCAAATTG GTGCTTCTAGGCCAGAGACTCCGCGTTCTTCAGGGGCACATTCTCTAAGCAGAGTATCAT TGAGGCCACCCCAGCAAGTGCTAAGTATTCGAACATCTTTGCCAACAATGGTTGGATCAC AACACTCTCCTGCTGGCAAGAAACTGCAACCGACAATTGCTTCTCCAAAGGTTCAAATAC TGAAATCTACACAGTCACAGTCATCGAACAAACGTTCTGCACAGAAGGAGACACCATCAA AGGTTCAAACTCAGCAATTGGAATCTGTGAGATCAAAGTTCAGGGAGTCACTTTCTGCTG CTCTGAGAACAGATTCTGATCAGAGTAAGAATCAATCTTCTGATGTGCAGCCTGATGGGT CTGCAGACCAAAAGAAAGAGATGGATGTAGATGCAGATCAAGTGGCCACCACATCCCAAG GCATGAGTGCAGCCAAGTCGGAAGTATTGACAAGTGTTGGTGCTGAGAGGCGTGCTGAAG ATGAGAAGTTAAACAGTGATTTAGTTTCGAACATAGCCACACCATTAAACGCGGACATCC AGCAACAACCAGAGAATGCTTCTTTACAAGATGAAATGTTGGGACAATATACAGTTGTTG CTGATGAACTCTTGCAAGGTCATGGACTTTGTTGGGTTTCTGACTTTGATGCTGGGGTTC CTGAACCTGCCACACAACCTAATTTAAAAAGGTCCAGGGCTTCTGACATTGACCCTGTTG TTGCAGACACTCTCTCAGAATCTGAGTCCAAAAGAATGAAGTCTGCCAATGATGAGGAAG CGATAGATAAGGATAGCATTATTCAGAAGGCAGATGATTTAGCAGTTAGGGTTGAAGAGG AGCTGTTCAAACTATTTGGTGGAGTTAATAAGAAGTATAAGGAGAAAGGTAGATCTCTTC TATTTAATCTAAAAGATAAAAGTAATCCTGAGTTAAGAGAGAGGGTATTGTCTGGAGATA TTACACCTGATCGCCTCTGTTCAATGACTGCGGAGGAACTTGCTTCCAAGGAGCTATCGG AGTGGCGGTTAGCTAAAGCTGAAGAACTAGCACAAATGGTTGTCCTTCCTAGTACCGAGG TTGATGTTAGACGTTTGGTTAGGAAAACACACAAAGGAGAATTTCAAGTTGAAGTAGAAG AAACAGATGGTATCTCAGTGGAGGTTGAGCTTGGAGGTAATCTTCTTACTCAAGTTCCAT CAAAAGCCCCTGAAGATCAGACCAAATCAGACGATAAAGAAAGTACAGATGATAAAACAG GCATACAAGACAATGACAAGGCACCTGATGGGACTTCACAAGATGAAGATAATGGGGCAG GCAAGAACGATCCACAAGATGATTTAGAATATGTTGATAATGAGAAAAGTGACCTTATGC AAGAACTTATGGTGGATGACTTGAAAGACACTGAAAACCTTCCACCGATCCCTTCACTAG ATGAATTCATGCAAGGTTTAGATTCTGAACCACCTTTTGAAAATCTCTCAGCTGGGACGC CAGAAGAAGATTCAGATGATCGAGACGAAGCTGACACTACTGCAGAATCTGCGGAACTTC CTGAGGAAGAAGTTAAAGTTTCTGCAGCAGAGAAGATTGTATCTGAAGCTGACCTGCCAT CTTCGCAGGATAAATCTGAGTCCAAGTTAGAGTCACCCAAAGATGAGGTGGGTTCAAATT TGGGCCCTGTTGAGCAGCGTGAAGGAAAGCTGATAAAATCCTCCCCAGATAGTGTTGAAG TCAAACAAACAACTACTGAAAATGTGCTGAATCGTGACTCTACTGTGCATAATATGGCAA CTACTCTTCCTATGATACGTGAAAGTATATGGGAGGGTGCAATTCAACTTACCATGTCTT CGCTCACAAATGTCGTTGCCATCTTCAAAAGTGGTGAAAAGCCACCAGTAAAAGAATGGC GGAGCTTTGTTGAAATCAAGGGGAGAGTCAAACTTAGTGCCTTTCAAGAGTTTGTTGAAC AGCTTCCCAAATCTAGGAGCCGTGCTATAATGGTAACTGAGTTGTGTTGGAAGGAAGGTT CTCATGAGAGTGGTCGCCAACATCTCTTGCAGACAATTGACTCGTATATTTCAGATGAAA GAGTAGGGTTAGCTGAACCTGCAGATGGAATAGAGCTGTACCTGTGCCCTTCTCAAGGGA AAACTGTGGAGATTCTCTCTCGGCACCTGCCAAAGGAGCATTTGGAGAGTCTTGCTGTGT CAGCATCCTCCATCATCGGGGTCATCGTCTGGCGGAGGCCCAACGTTCCCAGGATGCCGG CACACCCTAGGCATGATGGTTCCCGGAGGCCGTCGATTTTAAAGAAACCGCAGGTTACTG GTTCTACTCCAGGCCCTAGGCCCTCCCTGCCTATGAGCTCGCACGGCGCGCCGCCGGGTT TTCCAGTTCAGCGTCACCGCCACGAGGAAGATGTAACTGATGATGTCCCTCCGGGCTTTG GCCCTGGTGTTGCTAGGGATGAAGACGATCTTCCTGAATTTAATTTTGTTAACTCGTCC