Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0203500-01
CDS Infomation	cds chromosome:IRGSP-1.0:2:5785295:5788769:-1 gene:Os02g0203500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RAPID LEAF SENESCENCE 1, rapid leaf senescence 1 description:NB (nucleotide-binding site)-containing protein with an ARM (armadillo) domain, Chloroplast degradation during leaf senescence (Os02t0203500-01)
Sequence	ATGGATGCTGTGAATGTTCTTGCCTCGGCGACCCAGCTGGTGTCCGCGATGCTCACCGCG GTCGGCGCGCTGGAGCAGGCGGCTGCCGACTTCGCCGAGGCTCCCAGGAGGCTCCAGGTT CTTGAGGATTTTGTGTCCGACCTTGGGCTGTTGATGCAGCAATCCAAGCAGAAGCACGCG CACAAGATGCACGCGCCGCAGCTCGAGCGTCAGCTCCAGAGCCTAGGCAAGCTGATGGAC CAGCTCCATGCCAACATCACAAAGGCGAGGCGGGTGTTGAAGAAAGGCAAAGGGAAGAAG GGCTTGGCCAGAGTTGTGTGGAGCTCGGTGACAGGGGACCCTCTGATGAAGTATGTTCAG CTGATCAGGGATGATCTCAACTGGTGGCTTGAGTTACAGAAGCTAACAGAGAGTGTGGGC AATGTCATAGCGTCTACAGCTAAGAGTACGCCATCCTTGGTGAGAGTCAAGTCGGAGCAT GGCTATCCAGTGTCAAAGAAGTGCAGCTATGTCAGGGAGCTGCTTATCAATGATGGTAGT CATCGAGTTGTCCTGATTGTCGGGTTATCTGGTATTGGGAAGTCGTGTCTTGCTCGACAA ATAGCTTCTGACCCGCCTGGTAATTTTGTGGATGGTGCAATTGAGCTTAGTTTTGGGCGG TGGTGCAGTAGAGCGGCATGCAATGGTAATAGGGATGAATACCACAAGCGTCTTGTTCGG AAAATATGTAAATTTCTTGTGCAGATTGGTTCCATGACTGTCAATGAGGATGTGGGCAAA GATCTTGAAGATGTCTGTTACTTGCTTCAGACTGCATTGGTAGGAAGGAGCATGCTGATC CTACTTGATGATGTCTGGGAGCAAGACATAGTTGATCGCTTCACAAACCTATATGATAAT GATTGCCGGTATCTTGTGACAACGAGGGATGAGGCAATTTATGAGATTGCAGAAGCTGAA AAGGTGGAAATATCCAAAGATGATATCAAAGAAATTGGCAAGGACATTCTTCTCTATCAT AGCCTTCTTACTGTTGAAGAGCTCCCGCCTGTTGCGTACGACTTGCTGGATCGTTGCGGC CACCATCCCCTTACAGTTGCTGTCATGGGTAAGGCTCTCAGAAAGGAGACCAGAGTCGAA AAATGGGATAGAGCAATCTCCAACCTTTCCACATATGCAACTTGTGCACCTGGACCGGTT TCATATGTGAATGAGAAAGAAGTGGAAACCACATTGACCATCTTTGGGTCTTTTGAGTTC AGCTTAGAAGCAATGCCAGAAAATTCAAGAAGGTTTTTCATGGTGCTTGCAGCTATCTCA TGGGATGAACCTGTTCCAGAGGCTTGCCTTGAATCCATGTGGTCAGCACTCATGCAGGAC ACTTTATTCCCCCTCGTGGTCTCGAAACTAGTAGAAGGCTCACTCATTATCAAACTGGAA GACCAATCGATGTATCATATGCATGACATGGTTTCGCTTTACCTCGAGAGTAAAACAGAC AACGCTGTTCATACTCTTTTGTTCGGTTCATTTCCTGAATATGCTGCATTGGTGTCTCCT TGGCTTTTCATTTTTGGCAAAGAGAGCGCAAAAGAGCGAGCTGAACAGAAGATAAGATCA TTATTTTCTTTGCTAGAGTTCATGGAGATAGAGATTTTACTAGGAAGCACCACCCAAGCT CTCATGGAATGCAAATCCATATCTGAATTTGAGGCTAGCAGGCTTCACTTCAGCAAAATA CTTAGTCCTCGAATAGCGGAGTTAATTTCTGTGGGGTCAACATCTCTCATTGTTACTGTC ACCAAATCTATTACAGTAATCTTTTTCCAAGGAGATTATGCTAAGCTTGCTCAGTCTCTT GAAACAGCAGGTTCTGTGGATAAATTAATTCATGTTCTTCGTGGCTGTGAAGATTCTTCT ACTCTAGCCAATGTTTCTACTGTTCTTGCCAAGATATCTGAGCATGTTGATGCTACAACT GCTGATGAAATTTTGGCAACCATTCCTATGGACCAAATTGCGAAATTACTCTCTCCTGAG AATGAAGAATGGCATGAAATTGTGTTTACAACTCTAGCATCTTTGATAAAGGTGGGAAAG TTAAGGGCTGTTGAGACAATGATCGAATCAGGAATTGACAAGAAGCTTCTTGTTCTTCTA GGCAGTGGTTCTGAGATCTCACAGCATCATGCGATTATCATGCTAAAAACATTCTGTGAA CTTGGTGCGCCACTTCAGGGGTGCATGGGACCTGGAGCGTTGACTCATTTGCCTTGGCAT GCTCGTCTCAGTTTGGAGAGATTTGTTTTATTTGACCAAAATGTAACTCCATCACCAAAG CCTCAACAATCTTTTGAGTTGATTCTTCACAAGATACTGCACAGAGACAACAAAGATAAC ATTGAGGCGATCCAAGGTTTATTACCTCTCGCTGAGAGGGCTAATGATTCAAGGGTGCAA GATCTCCTTTTGGGAAGCAATATGTCCAATGGGTTGGCACTGCTGCTGCAACGGAGAGAC ATTGAAAGCAACCAAGTGAGGTCTCACACTGCTTTTCTGGTGATGAAATTAGCCTGCACT GGAGGGGAACCATATGTCCATAGGTTCTTAGAGGCTAACATTGTTCATGAGCTAATTGAC ATGATGCAGTGCAACATCAACGATCTCCAGGATTCAGCATACTATGCCCTTCACCAGATT ATCTTTGCGAAGGGGGGATCACTTGTATTACAGAGATTTTTACAAGCAGGAACCATTGAA AAATTGGTTAACTTGCTTGACCGCAAGTCTTCAAAGACAAAGGAACTAACAATGCAGCTT CTGGTAGACATTGCGGTGGTCGGAACCAAACCTTGCATCGAAAGAATGCTCTCGTCCCAA ATCATCGAGAAATTTGTGGCACTCGAGAAAGCAGGTGGGTCTTTCAGTGGAGCGGTATCA AGATACGTGCAGGGGTTGAACATGTGCAAGAACGTCCAGTCTGCTGAGAGATCAGTCATG AAGCAACAGATTCTGAGGAAAGTGAGATCAGAGATAAGAGGTCATGATCTGGAAGCAAGT CTAGTTGCCTCTGTGGAAGCTTGCATTTCTGAAAAAGGAGCCAGCAGCAGGAGGAAAAAG TAG

Peptide Sequence

PEP ID	Os02t0203500-01
PEP Infomation	pep chromosome:IRGSP-1.0:2:5785295:5788769:-1 gene:Os02g0203500 transcript:Os02t0203500-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RAPID LEAF SENESCENCE 1, rapid leaf senescence 1 description:NB (nucleotide-binding site)-containing protein with an ARM (armadillo) domain, Chloroplast degradation during leaf senescence (Os02t0203500-01)
Sequence	MDAVNVLASATQLVSAMLTAVGALEQAAADFAEAPRRLQVLEDFVSDLGLLMQQSKQKHA HKMHAPQLERQLQSLGKLMDQLHANITKARRVLKKGKGKKGLARVVWSSVTGDPLMKYVQ LIRDDLNWWLELQKLTESVGNVIASTAKSTPSLVRVKSEHGYPVSKKCSYVRELLINDGS HRVVLIVGLSGIGKSCLARQIASDPPGNFVDGAIELSFGRWCSRAACNGNRDEYHKRLVR KICKFLVQIGSMTVNEDVGKDLEDVCYLLQTALVGRSMLILLDDVWEQDIVDRFTNLYDN DCRYLVTTRDEAIYEIAEAEKVEISKDDIKEIGKDILLYHSLLTVEELPPVAYDLLDRCG HHPLTVAVMGKALRKETRVEKWDRAISNLSTYATCAPGPVSYVNEKEVETTLTIFGSFEF SLEAMPENSRRFFMVLAAISWDEPVPEACLESMWSALMQDTLFPLVVSKLVEGSLIIKLE DQSMYHMHDMVSLYLESKTDNAVHTLLFGSFPEYAALVSPWLFIFGKESAKERAEQKIRS LFSLLEFMEIEILLGSTTQALMECKSISEFEASRLHFSKILSPRIAELISVGSTSLIVTV TKSITVIFFQGDYAKLAQSLETAGSVDKLIHVLRGCEDSSTLANVSTVLAKISEHVDATT ADEILATIPMDQIAKLLSPENEEWHEIVFTTLASLIKVGKLRAVETMIESGIDKKLLVLL GSGSEISQHHAIIMLKTFCELGAPLQGCMGPGALTHLPWHARLSLERFVLFDQNVTPSPK PQQSFELILHKILHRDNKDNIEAIQGLLPLAERANDSRVQDLLLGSNMSNGLALLLQRRD IESNQVRSHTAFLVMKLACTGGEPYVHRFLEANIVHELIDMMQCNINDLQDSAYYALHQI IFAKGGSLVLQRFLQAGTIEKLVNLLDRKSSKTKELTMQLLVDIAVVGTKPCIERMLSSQ IIEKFVALEKAGGSFSGAVSRYVQGLNMCKNVQSAERSVMKQQILRKVRSEIRGHDLEAS LVASVEACISEKGASSRRKK

Transcript Sequence

Transcript ID	Os02t0203500-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:5785295:5788769:-1 gene:Os02g0203500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RAPID LEAF SENESCENCE 1, rapid leaf senescence 1 description:NB (nucleotide-binding site)-containing protein with an ARM (armadillo) domain, Chloroplast degradation during leaf senescence (Os02t0203500-01)
Sequence	ATGGATGCTGTGAATGTTCTTGCCTCGGCGACCCAGCTGGTGTCCGCGATGCTCACCGCG GTCGGCGCGCTGGAGCAGGCGGCTGCCGACTTCGCCGAGGCTCCCAGGAGGCTCCAGGTT CTTGAGGATTTTGTGTCCGACCTTGGGCTGTTGATGCAGCAATCCAAGCAGAAGCACGCG CACAAGATGCACGCGCCGCAGCTCGAGCGTCAGCTCCAGAGCCTAGGCAAGCTGATGGAC CAGCTCCATGCCAACATCACAAAGGCGAGGCGGGTGTTGAAGAAAGGCAAAGGGAAGAAG GGCTTGGCCAGAGTTGTGTGGAGCTCGGTGACAGGGGACCCTCTGATGAAGTATGTTCAG CTGATCAGGGATGATCTCAACTGGTGGCTTGAGTTACAGAAGCTAACAGAGAGTGTGGGC AATGTCATAGCGTCTACAGCTAAGAGTACGCCATCCTTGGTGAGAGTCAAGTCGGAGCAT GGCTATCCAGTGTCAAAGAAGTGCAGCTATGTCAGGGAGCTGCTTATCAATGATGGTAGT CATCGAGTTGTCCTGATTGTCGGGTTATCTGGTATTGGGAAGTCGTGTCTTGCTCGACAA ATAGCTTCTGACCCGCCTGGTAATTTTGTGGATGGTGCAATTGAGCTTAGTTTTGGGCGG TGGTGCAGTAGAGCGGCATGCAATGGTAATAGGGATGAATACCACAAGCGTCTTGTTCGG AAAATATGTAAATTTCTTGTGCAGATTGGTTCCATGACTGTCAATGAGGATGTGGGCAAA GATCTTGAAGATGTCTGTTACTTGCTTCAGACTGCATTGGTAGGAAGGAGCATGCTGATC CTACTTGATGATGTCTGGGAGCAAGACATAGTTGATCGCTTCACAAACCTATATGATAAT GATTGCCGGTATCTTGTGACAACGAGGGATGAGGCAATTTATGAGATTGCAGAAGCTGAA AAGGTGGAAATATCCAAAGATGATATCAAAGAAATTGGCAAGGACATTCTTCTCTATCAT AGCCTTCTTACTGTTGAAGAGCTCCCGCCTGTTGCGTACGACTTGCTGGATCGTTGCGGC CACCATCCCCTTACAGTTGCTGTCATGGGTAAGGCTCTCAGAAAGGAGACCAGAGTCGAA AAATGGGATAGAGCAATCTCCAACCTTTCCACATATGCAACTTGTGCACCTGGACCGGTT TCATATGTGAATGAGAAAGAAGTGGAAACCACATTGACCATCTTTGGGTCTTTTGAGTTC AGCTTAGAAGCAATGCCAGAAAATTCAAGAAGGTTTTTCATGGTGCTTGCAGCTATCTCA TGGGATGAACCTGTTCCAGAGGCTTGCCTTGAATCCATGTGGTCAGCACTCATGCAGGAC ACTTTATTCCCCCTCGTGGTCTCGAAACTAGTAGAAGGCTCACTCATTATCAAACTGGAA GACCAATCGATGTATCATATGCATGACATGGTTTCGCTTTACCTCGAGAGTAAAACAGAC AACGCTGTTCATACTCTTTTGTTCGGTTCATTTCCTGAATATGCTGCATTGGTGTCTCCT TGGCTTTTCATTTTTGGCAAAGAGAGCGCAAAAGAGCGAGCTGAACAGAAGATAAGATCA TTATTTTCTTTGCTAGAGTTCATGGAGATAGAGATTTTACTAGGAAGCACCACCCAAGCT CTCATGGAATGCAAATCCATATCTGAATTTGAGGCTAGCAGGCTTCACTTCAGCAAAATA CTTAGTCCTCGAATAGCGGAGTTAATTTCTGTGGGGTCAACATCTCTCATTGTTACTGTC ACCAAATCTATTACAGTAATCTTTTTCCAAGGAGATTATGCTAAGCTTGCTCAGTCTCTT GAAACAGCAGGTTCTGTGGATAAATTAATTCATGTTCTTCGTGGCTGTGAAGATTCTTCT ACTCTAGCCAATGTTTCTACTGTTCTTGCCAAGATATCTGAGCATGTTGATGCTACAACT GCTGATGAAATTTTGGCAACCATTCCTATGGACCAAATTGCGAAATTACTCTCTCCTGAG AATGAAGAATGGCATGAAATTGTGTTTACAACTCTAGCATCTTTGATAAAGGTGGGAAAG TTAAGGGCTGTTGAGACAATGATCGAATCAGGAATTGACAAGAAGCTTCTTGTTCTTCTA GGCAGTGGTTCTGAGATCTCACAGCATCATGCGATTATCATGCTAAAAACATTCTGTGAA CTTGGTGCGCCACTTCAGGGGTGCATGGGACCTGGAGCGTTGACTCATTTGCCTTGGCAT GCTCGTCTCAGTTTGGAGAGATTTGTTTTATTTGACCAAAATGTAACTCCATCACCAAAG CCTCAACAATCTTTTGAGTTGATTCTTCACAAGATACTGCACAGAGACAACAAAGATAAC ATTGAGGCGATCCAAGGTTTATTACCTCTCGCTGAGAGGGCTAATGATTCAAGGGTGCAA GATCTCCTTTTGGGAAGCAATATGTCCAATGGGTTGGCACTGCTGCTGCAACGGAGAGAC ATTGAAAGCAACCAAGTGAGGTCTCACACTGCTTTTCTGGTGATGAAATTAGCCTGCACT GGAGGGGAACCATATGTCCATAGGTTCTTAGAGGCTAACATTGTTCATGAGCTAATTGAC ATGATGCAGTGCAACATCAACGATCTCCAGGATTCAGCATACTATGCCCTTCACCAGATT ATCTTTGCGAAGGGGGGATCACTTGTATTACAGAGATTTTTACAAGCAGGAACCATTGAA AAATTGGTTAACTTGCTTGACCGCAAGTCTTCAAAGACAAAGGAACTAACAATGCAGCTT CTGGTAGACATTGCGGTGGTCGGAACCAAACCTTGCATCGAAAGAATGCTCTCGTCCCAA ATCATCGAGAAATTTGTGGCACTCGAGAAAGCAGGTGGGTCTTTCAGTGGAGCGGTATCA AGATACGTGCAGGGGTTGAACATGTGCAAGAACGTCCAGTCTGCTGAGAGATCAGTCATG AAGCAACAGATTCTGAGGAAAGTGAGATCAGAGATAAGAGGTCATGATCTGGAAGCAAGT CTAGTTGCCTCTGTGGAAGCTTGCATTTCTGAAAAAGGAGCCAGCAGCAGGAGGAAAAAG TAG