Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0201900-01
CDS Infomation	cds chromosome:IRGSP-1.0:2:5694661:5697832:-1 gene:Os02g0201900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RNA helicase 41 description:DNA/RNA helicase, C-terminal domain containing protein. (Os02t0201900-01);DNA/RNA helicase, C-terminal domain containing protein. (Os02t0201900-02)
Sequence	ATGGAGCAAGAAGAGAATCATTCAGCTGATCACTTGTCTGCTCAACCTGGTAATGGCAAC GAATTGGAAGAATCATCTGTAAAGGAAAGGTGTTTTGAGCAGAGAGAAGCCCTTGTTGGG GAGCCTCGCTGTGTTATTTGTGGCCGATATGGTGAATACATATGTGATCAGACTGACGAT GACATATGTAGTGTTGAATGCAAGACAATTCTTCTTTCCAAACTTTCTGCTGAAACAAGG CCAGTAGTAAAAGCAGCAAAGCGTGTAAATCTTCCTGTTGGCGACGAGAGCTTCTGTATT AGGGACGAAAATTTTCCTAAAATACCAAGTATGCACGATGGTCAGATTGCTTCACTGAGA AGCAAACTTGATATTTGTGTCAAGGGTGAGGATGTTCCAGATCCAATCATGTGTTTTTCT TCCTCTGGTCTCCCTGAGAAGCTTGTGCTCAATCTTGAGGCTGCGGGATATGTAATGCCT ACTCCAGTGCAAATGCAAGTCATCCCTTCATCAATATGTAATAGAAGCTTACTTGTCTCT GCTGATACTGGTTCAGGGAAAACAGCTTCTTTTCTTGTTCCCATAATTGCACATTGTTCA CACGTGCGATCAGAGAGATGCACAGACAAGCAAGGGCCATTAGCTATAGTCCTTGCTCCA ACTAGAGAGCTATGTCTGCAGGTGGAAGAACAAGCAAAAGTGCTTGGAAAGGGTTTACCT TTTAAGACTGCTCTAGTTGTTGGTGGAGATCCCTTGGCTCAGCAAATCTACAGGATTGAA AATGGCATCGAGTTGATTGTTGGCACCCCTGGGAGGCTAATTGATCTACTCATGAAGCAC AATGTTGATCTTAACAAAGTTGATGTATTCGTTTTGGATGAGGTGGACTGCTTGCTAGAG AGGGGATTCAGAGATCAGGTCATGCAAATCTTCCAAGCACTTTCGCATCCCCAGGTTATG ATGTTTTCGGCAACTGTAAATTCAGAAGTTGAGAAGATGTCAAACTCACTGGCTAAGAAT GCGATACATATTTCTTGTGGAAATCCAAGCAGACCAAACAAATCAGTTAAACAAGTGGTC ATTTGGGTGGAGTCTAAGCAGAAGAAGCAGAAAATTTTTGAGATAATGACAAGTAAACAG CACTTTAAACCTCCCGCTGTTGTTTTTGTGAGTTCTAGAATTGGCGCTGATCTGTTGTCC GAAGCAATTACTGTTGCTACTGGATTGAAGGTGGTTTCTATTCATGGTGATAAGACAATG AATGAGAGAAGAGAAAGCTTGAGAAGGTTTCTCACAGGAGAAGTGTCTGTTGTTGTTTGT ACTGGGGTATTGGGACGTGGAATGGATCTCCTGAAAGTTCGTCAGGTGATATTATTTGAC ATGCCAAATTCCATTGATGAATATGTTCACCAAGTTGGAAGAGCATCTCGAATGGGTGTG GAGGGTATGGCTATTGTCTTTGTTAATGAGGAGGACAGGAATCTTTTCAGAGAGCTTGTT CAGATTCTGAAGACTGCAGGTGCTCCAATTCCCAGGGAACTTGCAAATTCAAAATACACA ACCGGTATACCCCTTGGTGGTGGTAAGAAGAGAAAGCTGAAGTCTAGGTGA

Peptide Sequence

PEP ID	Os02t0201900-01
PEP Infomation	pep chromosome:IRGSP-1.0:2:5694661:5697832:-1 gene:Os02g0201900 transcript:Os02t0201900-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RNA helicase 41 description:DNA/RNA helicase, C-terminal domain containing protein. (Os02t0201900-01);DNA/RNA helicase, C-terminal domain containing protein. (Os02t0201900-02)
Sequence	MEQEENHSADHLSAQPGNGNELEESSVKERCFEQREALVGEPRCVICGRYGEYICDQTDD DICSVECKTILLSKLSAETRPVVKAAKRVNLPVGDESFCIRDENFPKIPSMHDGQIASLR SKLDICVKGEDVPDPIMCFSSSGLPEKLVLNLEAAGYVMPTPVQMQVIPSSICNRSLLVS ADTGSGKTASFLVPIIAHCSHVRSERCTDKQGPLAIVLAPTRELCLQVEEQAKVLGKGLP FKTALVVGGDPLAQQIYRIENGIELIVGTPGRLIDLLMKHNVDLNKVDVFVLDEVDCLLE RGFRDQVMQIFQALSHPQVMMFSATVNSEVEKMSNSLAKNAIHISCGNPSRPNKSVKQVV IWVESKQKKQKIFEIMTSKQHFKPPAVVFVSSRIGADLLSEAITVATGLKVVSIHGDKTM NERRESLRRFLTGEVSVVVCTGVLGRGMDLLKVRQVILFDMPNSIDEYVHQVGRASRMGV EGMAIVFVNEEDRNLFRELVQILKTAGAPIPRELANSKYTTGIPLGGGKKRKLKSR

Transcript Sequence

Transcript ID	Os02t0201900-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:5694661:5697832:-1 gene:Os02g0201900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RNA helicase 41 description:DNA/RNA helicase, C-terminal domain containing protein. (Os02t0201900-01);DNA/RNA helicase, C-terminal domain containing protein. (Os02t0201900-02)
Sequence	GGCGTAAAAGAAAGAGAAATCTCCCGTCTCGTCGTCTCCTCCGCTCCTTGCGCGCCAAGA CGAGTTGCGCGCGGCTGAACAGGGGAGGGGCGCCGATCTCCATCCGGCGAGCAGAGCAGG GGAGGGGAGGGGATCCTGTTTTGTGGATTTATCTTCCAACATCAATAGAATGGAGCAAGA AGAGAATCATTCAGCTGATCACTTGTCTGCTCAACCTGGTAATGGCAACGAATTGGAAGA ATCATCTGTAAAGGAAAGGTGTTTTGAGCAGAGAGAAGCCCTTGTTGGGGAGCCTCGCTG TGTTATTTGTGGCCGATATGGTGAATACATATGTGATCAGACTGACGATGACATATGTAG TGTTGAATGCAAGACAATTCTTCTTTCCAAACTTTCTGCTGAAACAAGGCCAGTAGTAAA AGCAGCAAAGCGTGTAAATCTTCCTGTTGGCGACGAGAGCTTCTGTATTAGGGACGAAAA TTTTCCTAAAATACCAAGTATGCACGATGGTCAGATTGCTTCACTGAGAAGCAAACTTGA TATTTGTGTCAAGGGTGAGGATGTTCCAGATCCAATCATGTGTTTTTCTTCCTCTGGTCT CCCTGAGAAGCTTGTGCTCAATCTTGAGGCTGCGGGATATGTAATGCCTACTCCAGTGCA AATGCAAGTCATCCCTTCATCAATATGTAATAGAAGCTTACTTGTCTCTGCTGATACTGG TTCAGGGAAAACAGCTTCTTTTCTTGTTCCCATAATTGCACATTGTTCACACGTGCGATC AGAGAGATGCACAGACAAGCAAGGGCCATTAGCTATAGTCCTTGCTCCAACTAGAGAGCT ATGTCTGCAGGTGGAAGAACAAGCAAAAGTGCTTGGAAAGGGTTTACCTTTTAAGACTGC TCTAGTTGTTGGTGGAGATCCCTTGGCTCAGCAAATCTACAGGATTGAAAATGGCATCGA GTTGATTGTTGGCACCCCTGGGAGGCTAATTGATCTACTCATGAAGCACAATGTTGATCT TAACAAAGTTGATGTATTCGTTTTGGATGAGGTGGACTGCTTGCTAGAGAGGGGATTCAG AGATCAGGTCATGCAAATCTTCCAAGCACTTTCGCATCCCCAGGTTATGATGTTTTCGGC AACTGTAAATTCAGAAGTTGAGAAGATGTCAAACTCACTGGCTAAGAATGCGATACATAT TTCTTGTGGAAATCCAAGCAGACCAAACAAATCAGTTAAACAAGTGGTCATTTGGGTGGA GTCTAAGCAGAAGAAGCAGAAAATTTTTGAGATAATGACAAGTAAACAGCACTTTAAACC TCCCGCTGTTGTTTTTGTGAGTTCTAGAATTGGCGCTGATCTGTTGTCCGAAGCAATTAC TGTTGCTACTGGATTGAAGGTGGTTTCTATTCATGGTGATAAGACAATGAATGAGAGAAG AGAAAGCTTGAGAAGGTTTCTCACAGGAGAAGTGTCTGTTGTTGTTTGTACTGGGGTATT GGGACGTGGAATGGATCTCCTGAAAGTTCGTCAGGTGATATTATTTGACATGCCAAATTC CATTGATGAATATGTTCACCAAGTTGGAAGAGCATCTCGAATGGGTGTGGAGGGTATGGC TATTGTCTTTGTTAATGAGGAGGACAGGAATCTTTTCAGAGAGCTTGTTCAGATTCTGAA GACTGCAGGTGCTCCAATTCCCAGGGAACTTGCAAATTCAAAATACACAACCGGTATACC CCTTGGTGGTGGTAAGAAGAGAAAGCTGAAGTCTAGGTGACATTCTTGACCAGGGTAAAT ATCAGAGTGGCGGTCAATCTTTCTTAAGGATGGAAAAATTGTATGCCTACCTGGAATGTT AGCTATGTTTTTATCTTCATGGGAATGCAAATGCATCTTATCATCTCTGGTGGATAAGTT GGATATGTCTAGAATTCAATCTTGTCAAATTTCCAGGCTTTTCCTGAGCCAACACGATTT CTCAGGGCAAGTACATGAAGTCATGAAATCAGCGTACGTGGCAAATGTAAAAGAATCTAT GGCACATGTAAATGTCAGCAAATTGTAAGTTAAAAAGGCTCTGTCCAATGGATTTGCTTG CATATCCTTTGATTGCACTGTTCATTCTT