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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0199300-01
CDS Infomation

cds chromosome:IRGSP-1.0:2:5567953:5569801:-1 gene:Os02g0199300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:FK506 binding protein 16-1 description:Peptidyl-prolyl cis-trans isomerase, FKBP-type domain containing protein. (Os02t0199300-01)
Sequence

ATGGCGCCCGCGTCGCTGACGAGATTGACCAACCCGTTGCCGTGCGCCTCTCCATCTCCA
AGATGCCGGCGCCGGCCGGGGAGATCTCCGCCGGCGAGGGCGGCGGCGTGCGGGGTGGTT
TCCAGGAGGAGGGCGGTGTCGGAGATGGCGATTCTTGGCGGCGCCGCCGCGGCCGCGGCC
TCCTGCTGCGTCGATCTCTTCTTCGCCCACATGCCTGCCCGTGCCGCCACGCTGGAGCCT
GATGTGATCAGGTACAGAAAGCTGGACAGTGGAGTGAAGCTTGAAGATGTTGTGGATGGC
GAGGGTCCAGAAGCACGTGAAGGAGATGTCGTGCAATTCAACTATGTGTGCCGCCGCGCA
AATGGTTATTTCGTGCATAGCACGGTTGACCAGTTTAGCGGCGAGAGTAAGCCGGTCACA
CTTGCACTTGATGGAAAAGAGATGATTCGAGGTCTCAAAGACGTCATCGTTGGAATGAAG
ACAGGAGGTAAGAGGAGAGCTCTGATACCTCCTCAAGTAGGTTACACTGATGAGAGCTTG
CAGCCCATACCAGAAGAGTTCGGTCCACGGCGAAGCCTCCTGTCACATGCCAAGGAGCCT
CTGGTGTTTGAGGTTCAGCTGCTCAAGGTCCTCTGA

Peptide Sequence

PEP ID

Os02t0199300-01
PEP Infomation

pep chromosome:IRGSP-1.0:2:5567953:5569801:-1 gene:Os02g0199300 transcript:Os02t0199300-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:FK506 binding protein 16-1 description:Peptidyl-prolyl cis-trans isomerase, FKBP-type domain containing protein. (Os02t0199300-01)
Sequence

MAPASLTRLTNPLPCASPSPRCRRRPGRSPPARAAACGVVSRRRAVSEMAILGGAAAAAA
SCCVDLFFAHMPARAATLEPDVIRYRKLDSGVKLEDVVDGEGPEAREGDVVQFNYVCRRA
NGYFVHSTVDQFSGESKPVTLALDGKEMIRGLKDVIVGMKTGGKRRALIPPQVGYTDESL
QPIPEEFGPRRSLLSHAKEPLVFEVQLLKVL

Transcript Sequence

Transcript ID

Os02t0199300-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:5567953:5569801:-1 gene:Os02g0199300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:FK506 binding protein 16-1 description:Peptidyl-prolyl cis-trans isomerase, FKBP-type domain containing protein. (Os02t0199300-01)
Sequence

ACCTCACAGGCACACCATCCAGGCTTCGCTTCCTCCAATCCACGACAATGGCGCCCGCGT
CGCTGACGAGATTGACCAACCCGTTGCCGTGCGCCTCTCCATCTCCAAGATGCCGGCGCC
GGCCGGGGAGATCTCCGCCGGCGAGGGCGGCGGCGTGCGGGGTGGTTTCCAGGAGGAGGG
CGGTGTCGGAGATGGCGATTCTTGGCGGCGCCGCCGCGGCCGCGGCCTCCTGCTGCGTCG
ATCTCTTCTTCGCCCACATGCCTGCCCGTGCCGCCACGCTGGAGCCTGATGTGATCAGGT
ACAGAAAGCTGGACAGTGGAGTGAAGCTTGAAGATGTTGTGGATGGCGAGGGTCCAGAAG
CACGTGAAGGAGATGTCGTGCAATTCAACTATGTGTGCCGCCGCGCAAATGGTTATTTCG
TGCATAGCACGGTTGACCAGTTTAGCGGCGAGAGTAAGCCGGTCACACTTGCACTTGATG
GAAAAGAGATGATTCGAGGTCTCAAAGACGTCATCGTTGGAATGAAGACAGGAGGTAAGA
GGAGAGCTCTGATACCTCCTCAAGTAGGTTACACTGATGAGAGCTTGCAGCCCATACCAG
AAGAGTTCGGTCCACGGCGAAGCCTCCTGTCACATGCCAAGGAGCCTCTGGTGTTTGAGG
TTCAGCTGCTCAAGGTCCTCTGACCCTGAATTTTTCTGCCATTATCTAATCATCACATCC
TATAGTGTTCACTCTTCAAAGAATATGCATTTCTCTTTCAGAATAAACTCAGAAAACTGT
ACTGTTTCATATGTATAAGATACAGTGATCACTTGCTGATTTGAAACGCAACTAGCAGCA
AGTTGAATCAATGAAAGAGACAATGAACAGCTTCTAGCC